Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787759

Identifier: 91787759

GI number: 91787759

Start: 1943369

End: 1943779

Strand: Reverse

Name: 91787759

Synonym: Bpro_1880

Alternate gene names: NA

Gene position: 1943779-1943369 (Counterclockwise)

Preceding gene: 91787761

Following gene: 91787752

Centisome position: 37.38

GC content: 69.83

Gene sequence:

>411_bases
ATGCCGAGCCCTGTGAGAACACCCCGCCAACCGCCCTTGCGCAGCGCCCGTACCTGGGCGACCCTGACCGTGGTCCTGGT
GGGCGCCGGCCTGTATGCGCTGGGCGCCCAGCCTTTCGCGGCAGGACTGATTCCGGCCCCGTGGGACAAGCTCGCGCACG
CAGTGACATTTGCGATCATTGGCAGCGCCATCGGTGTCGCCAGCGGAGCGCGCGGCTGGCGCAGAACGGCCTGCTGCCTT
GCCGGCGCGGTCGCCATCGGCGTGCTGGACGAGTTGCACCAGGCCTATTTGCCGGGACGCATCGCCAGCTGGTCCGACCT
GGCGGCCGACGCCATGGGGGGCCTCTTGGGCGCCGTGTTGCTCACTGCCGTCCCGGGAGCGATACGCAGGTGGACTGCCA
GGCATCATTGA

Upstream 100 bases:

>100_bases
AGGTAACGGCTCAACATATCGCCACCCTCCGGGCCACTGCCACCGCTACGATCCCGCTACTGGTGTTTCCGGGTTTCCCA
GGTTCAGGGGGGCACATCGC

Downstream 100 bases:

>100_bases
ATCCTCATCAGTTGAAACCTCATCAGGCATCGTTAAGCACCGACCCGACCAGGGTCACCCCAAATTCGCGCAGACCCTGG
GTGAGCTGGGCCATTTGCGG

Product: VanZ-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MPSPVRTPRQPPLRSARTWATLTVVLVGAGLYALGAQPFAAGLIPAPWDKLAHAVTFAIIGSAIGVASGARGWRRTACCL
AGAVAIGVLDELHQAYLPGRIASWSDLAADAMGGLLGAVLLTAVPGAIRRWTARHH

Sequences:

>Translated_136_residues
MPSPVRTPRQPPLRSARTWATLTVVLVGAGLYALGAQPFAAGLIPAPWDKLAHAVTFAIIGSAIGVASGARGWRRTACCL
AGAVAIGVLDELHQAYLPGRIASWSDLAADAMGGLLGAVLLTAVPGAIRRWTARHH
>Mature_135_residues
PSPVRTPRQPPLRSARTWATLTVVLVGAGLYALGAQPFAAGLIPAPWDKLAHAVTFAIIGSAIGVASGARGWRRTACCLA
GAVAIGVLDELHQAYLPGRIASWSDLAADAMGGLLGAVLLTAVPGAIRRWTARHH

Specific function: Unknown

COG id: COG5652

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14079; Mature: 13947

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPVRTPRQPPLRSARTWATLTVVLVGAGLYALGAQPFAAGLIPAPWDKLAHAVTFAII
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHH
GSAIGVASGARGWRRTACCLAGAVAIGVLDELHQAYLPGRIASWSDLAADAMGGLLGAVL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LTAVPGAIRRWTARHH
HHHCCHHHHHHHHCCC
>Mature Secondary Structure 
PSPVRTPRQPPLRSARTWATLTVVLVGAGLYALGAQPFAAGLIPAPWDKLAHAVTFAII
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHH
GSAIGVASGARGWRRTACCLAGAVAIGVLDELHQAYLPGRIASWSDLAADAMGGLLGAVL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LTAVPGAIRRWTARHH
HHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA