| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787755
Identifier: 91787755
GI number: 91787755
Start: 1938678
End: 1940054
Strand: Direct
Name: 91787755
Synonym: Bpro_1876
Alternate gene names: NA
Gene position: 1938678-1940054 (Clockwise)
Preceding gene: 91787754
Following gene: 91787756
Centisome position: 37.28
GC content: 60.28
Gene sequence:
>1377_bases ATGCGTCAAAGCGTCAATGTGCCCAGTAGTGCAAAAGAGCTATTTCACAACCTACACATTCCTATGAAACTAACATCTTT ACTCCTCAATCAACGCGTTGCAATTCAACCCCGGAGGGGCACCCTGACTGATTCGTTTCCTCAAATCCGGCGCAGCCTTG GCCGCCCGCCTTCCTCGCGAGACTTCGCACTGATCCCGCTGGGCTCGCTTGCCTTGATGGGTCTGCTTCCGCTGGGGGCG TACGCGGACGAACTGGACACCCTGCAGTTTCAGGCCGGGCAAAGTGTCCAGCACGACAGCAACGTGTTTCGCTTGTCCGA CTCGGCGGACACCCAGGCGCTGCTGGGCACGTCAGATCGTTCAGACACCATCGCCGTGACAACGGCGGGTTTCAAGGTGA ACAAGCCCTACGGCTTGCAGCGGTTTGAGGTGGCGGCCAATGTCGAGAAACACAATTACAGGAACTTCTCGAATCTGGAT TTCACGGCGTTTAACTATGGTGCGGCATGGCGCTGGAGTTTCACCCCGGCCCTCCACGGCAACCTGACGACGGACCGGCG GGAGTACGTCGACACCACGGCGGACGTGCAAACCACAGGTCAGCTCAATCGCCGGACGAACCGCTCGACGGTGTTCGATG CAGAGTACGAACTCGACGGTGCCTGGCGCGTGCTGGGGGGTGTTTTTGAACGCACCAGCACCAGTAGCCAGCCTTTTACC TTTGAGGGCGACTACAAGATACGCGGCGCGGAGGCCGGCGTGCGGCACGTCTGGTCATCGGGTACGTCGCTGGCCTATCG CTTCAAGAACGGCGAGGGCGAATATCCAGGCCGCACATTGTCGGCGGTGTCTGCCAGCGACTTTACCGACCGCGAACATG AATTGCGGCTTGACTGGGCGCCCACAGGGAAAACCACGGTGAAGGCCCGGCTTTCGCATTTTGACCGCGCCCACGACGGA CTTTCGGTACGAGACTTTTCCGGCGTCACGGGCCAGGTTGATGCAACCTGGGCCGTGACCGGCAAGACCAGCATCACGGG TGGCCTGGCACGTGAACTGGGCAGCTACCAGACCACGACATCGAGCTATTACCAGGGCTTGCGCTTCTTCATTGCGCCGA CCTGGAAACCGACGGAAAAAACCGCCGTGCGGCTGCGTTACGACCATGGTGTGCGGGATTTCCGCGGGCCGTTGCCCGGC TTCATGGCCACCGACCGCGAAGACACGACCAGACTGGCTTCCCTGATCCTCGAATGGCAGCCGGTTCGTGCGCTCAAGTT GATGGCAACGGCGCAGCGCGACAGGCGCACGTCCAACGCGCCGGGGTTTGATTACACGAGCAATGTGTTCGGCATTTCGG CCCTGGCGAGTTTTTAG
Upstream 100 bases:
>100_bases TTTGAGAAATTGGTCGTTGCAGCTCGACCTGTTCATTATCTTGAAGACTGTGCGGCTTGTTTTCAAAGACAGTTCCGCAT ACTGAAACGGATGGGATGCA
Downstream 100 bases:
>100_bases GTCGGGCAGGGCCGTCCCGTACGTCCCTGGCTTCCTTGCCGCACATTGATCCATTCCTTCCAACATTTCATCCACTAAAA GGTGCCAAGATGAAACCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: EPS Biosynthesis Protein; Exopolysaccharide Biosynthesis Operon Protein Epsl
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MRQSVNVPSSAKELFHNLHIPMKLTSLLLNQRVAIQPRRGTLTDSFPQIRRSLGRPPSSRDFALIPLGSLALMGLLPLGA YADELDTLQFQAGQSVQHDSNVFRLSDSADTQALLGTSDRSDTIAVTTAGFKVNKPYGLQRFEVAANVEKHNYRNFSNLD FTAFNYGAAWRWSFTPALHGNLTTDRREYVDTTADVQTTGQLNRRTNRSTVFDAEYELDGAWRVLGGVFERTSTSSQPFT FEGDYKIRGAEAGVRHVWSSGTSLAYRFKNGEGEYPGRTLSAVSASDFTDREHELRLDWAPTGKTTVKARLSHFDRAHDG LSVRDFSGVTGQVDATWAVTGKTSITGGLARELGSYQTTTSSYYQGLRFFIAPTWKPTEKTAVRLRYDHGVRDFRGPLPG FMATDREDTTRLASLILEWQPVRALKLMATAQRDRRTSNAPGFDYTSNVFGISALASF
Sequences:
>Translated_458_residues MRQSVNVPSSAKELFHNLHIPMKLTSLLLNQRVAIQPRRGTLTDSFPQIRRSLGRPPSSRDFALIPLGSLALMGLLPLGA YADELDTLQFQAGQSVQHDSNVFRLSDSADTQALLGTSDRSDTIAVTTAGFKVNKPYGLQRFEVAANVEKHNYRNFSNLD FTAFNYGAAWRWSFTPALHGNLTTDRREYVDTTADVQTTGQLNRRTNRSTVFDAEYELDGAWRVLGGVFERTSTSSQPFT FEGDYKIRGAEAGVRHVWSSGTSLAYRFKNGEGEYPGRTLSAVSASDFTDREHELRLDWAPTGKTTVKARLSHFDRAHDG LSVRDFSGVTGQVDATWAVTGKTSITGGLARELGSYQTTTSSYYQGLRFFIAPTWKPTEKTAVRLRYDHGVRDFRGPLPG FMATDREDTTRLASLILEWQPVRALKLMATAQRDRRTSNAPGFDYTSNVFGISALASF >Mature_458_residues MRQSVNVPSSAKELFHNLHIPMKLTSLLLNQRVAIQPRRGTLTDSFPQIRRSLGRPPSSRDFALIPLGSLALMGLLPLGA YADELDTLQFQAGQSVQHDSNVFRLSDSADTQALLGTSDRSDTIAVTTAGFKVNKPYGLQRFEVAANVEKHNYRNFSNLD FTAFNYGAAWRWSFTPALHGNLTTDRREYVDTTADVQTTGQLNRRTNRSTVFDAEYELDGAWRVLGGVFERTSTSSQPFT FEGDYKIRGAEAGVRHVWSSGTSLAYRFKNGEGEYPGRTLSAVSASDFTDREHELRLDWAPTGKTTVKARLSHFDRAHDG LSVRDFSGVTGQVDATWAVTGKTSITGGLARELGSYQTTTSSYYQGLRFFIAPTWKPTEKTAVRLRYDHGVRDFRGPLPG FMATDREDTTRLASLILEWQPVRALKLMATAQRDRRTSNAPGFDYTSNVFGISALASF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50957; Mature: 50957
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQSVNVPSSAKELFHNLHIPMKLTSLLLNQRVAIQPRRGTLTDSFPQIRRSLGRPPSSR CCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCCC DFALIPLGSLALMGLLPLGAYADELDTLQFQAGQSVQHDSNVFRLSDSADTQALLGTSDR CEEEEEHHHHHHHHHHCCCCHHHHHHHEEECCCCCCCCCCCEEEECCCCCCEEEECCCCC SDTIAVTTAGFKVNKPYGLQRFEVAANVEKHNYRNFSNLDFTAFNYGAAWRWSFTPALHG CCEEEEEECCEEECCCCCCEEEEEEECCHHHCCCCCCCCCEEEEECCCEEEEECCCCCCC NLTTDRREYVDTTADVQTTGQLNRRTNRSTVFDAEYELDGAWRVLGGVFERTSTSSQPFT CCCCCHHHHHCCCCCEECCCCHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEE FEGDYKIRGAEAGVRHVWSSGTSLAYRFKNGEGEYPGRTLSAVSASDFTDREHELRLDWA ECCCEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEEEC PTGKTTVKARLSHFDRAHDGLSVRDFSGVTGQVDATWAVTGKTSITGGLARELGSYQTTT CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCH SSYYQGLRFFIAPTWKPTEKTAVRLRYDHGVRDFRGPLPGFMATDREDTTRLASLILEWQ HHHHCCEEEEEECCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCC PVRALKLMATAQRDRRTSNAPGFDYTSNVFGISALASF CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MRQSVNVPSSAKELFHNLHIPMKLTSLLLNQRVAIQPRRGTLTDSFPQIRRSLGRPPSSR CCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCCC DFALIPLGSLALMGLLPLGAYADELDTLQFQAGQSVQHDSNVFRLSDSADTQALLGTSDR CEEEEEHHHHHHHHHHCCCCHHHHHHHEEECCCCCCCCCCCEEEECCCCCCEEEECCCCC SDTIAVTTAGFKVNKPYGLQRFEVAANVEKHNYRNFSNLDFTAFNYGAAWRWSFTPALHG CCEEEEEECCEEECCCCCCEEEEEEECCHHHCCCCCCCCCEEEEECCCEEEEECCCCCCC NLTTDRREYVDTTADVQTTGQLNRRTNRSTVFDAEYELDGAWRVLGGVFERTSTSSQPFT CCCCCHHHHHCCCCCEECCCCHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEE FEGDYKIRGAEAGVRHVWSSGTSLAYRFKNGEGEYPGRTLSAVSASDFTDREHELRLDWA ECCCEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEEEC PTGKTTVKARLSHFDRAHDGLSVRDFSGVTGQVDATWAVTGKTSITGGLARELGSYQTTT CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCH SSYYQGLRFFIAPTWKPTEKTAVRLRYDHGVRDFRGPLPGFMATDREDTTRLASLILEWQ HHHHCCEEEEEECCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCC PVRALKLMATAQRDRRTSNAPGFDYTSNVFGISALASF CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA