| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787716
Identifier: 91787716
GI number: 91787716
Start: 1898368
End: 1898835
Strand: Direct
Name: 91787716
Synonym: Bpro_1837
Alternate gene names: NA
Gene position: 1898368-1898835 (Clockwise)
Preceding gene: 91787713
Following gene: 91787719
Centisome position: 36.51
GC content: 58.33
Gene sequence:
>468_bases ATGAAGGTTCTTGACATCCTGCGCGTTAAAGGCAACACGCTTTACACCGTTCAGCCTGATGAACCCCTGGCCAAGGCGAC ACAGATCATGGCCGACAAGGACATCGGTTCGCTGGTCGTCATGGAGCACGGTGACCTGGTGGGCATGCTGACCTTCCGCG AAGTGATCGTCTGCATCGTCAAAAATGGTGGCGAGATCGGCAACACCCTGGTACGCACGGCCATGGACGACCATCCCTTG ACCTGCACGTCGGAAACCGAACTCGACGAAGTGCGCCGCATGATGCTGGACCGCCATGCGCGCTACATGCCGGTGATGAA CCAGAAAATGCTGATGGGCGTGATCAGCTTTTACGACGTCGCCAAGGCCGTGGTGGACAGCCAGAACTTCGAGAACAAGA TGCTCAAGGCTTACATCCGCGACTGGCCGGCCGGGCAGGAAGAAGAGGGCGAGTCCAAGCTGCCGTGA
Upstream 100 bases:
>100_bases CTGCTTGATTGTGGGCTATATTTAAACTGAATTCCCCGGCGCGCCCTGGCTGTAATGCCTGTTGCGGGGGGACAATGACA GACCAACCGAGGAGAAAGCG
Downstream 100 bases:
>100_bases GCTTGGCACAACCCGCTTGGCGCGCCTTGGCGTCAACCGGAGTCAGGGTTTTGCGATGACAATTTCAGTGACGGCGTTCT GGCTCGCGTCGTAGGTCATC
Product: CBS domain-containing protein
Products: NA
Alternate protein names: Signal-Transduction Protein; CBS Domain Containing Protein; Signal Transduction Protein With CBS Domains; CBS Domain Protein; Signal-Transduction Protein With CBS Domains; XRE Family Transcriptional Regulator; Signal Transduction Protein; CBS Domain Pair Family; Inosine-5-Monophosphate Dehydrogenase; CBS Domain Containing Membrane Protein; Signal-Transduction Protein With CBS; IMP Dehydrogenase; Transcriptional Regulator XRE Family; Inosine-5prime-Monophosphate Dehydrogenase Protein; CBS Domain Pair Family Protein; Signal-Transduction Protein With Cbs Domains; CBS Domain-Containing Signal Transduction Protein; Transcriptional Regulator XRE Family Protein; Signal Transduction Protein With Cbs Domains; Cbs Domain Containing Protein
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKVLDILRVKGNTLYTVQPDEPLAKATQIMADKDIGSLVVMEHGDLVGMLTFREVIVCIVKNGGEIGNTLVRTAMDDHPL TCTSETELDEVRRMMLDRHARYMPVMNQKMLMGVISFYDVAKAVVDSQNFENKMLKAYIRDWPAGQEEEGESKLP
Sequences:
>Translated_155_residues MKVLDILRVKGNTLYTVQPDEPLAKATQIMADKDIGSLVVMEHGDLVGMLTFREVIVCIVKNGGEIGNTLVRTAMDDHPL TCTSETELDEVRRMMLDRHARYMPVMNQKMLMGVISFYDVAKAVVDSQNFENKMLKAYIRDWPAGQEEEGESKLP >Mature_155_residues MKVLDILRVKGNTLYTVQPDEPLAKATQIMADKDIGSLVVMEHGDLVGMLTFREVIVCIVKNGGEIGNTLVRTAMDDHPL TCTSETELDEVRRMMLDRHARYMPVMNQKMLMGVISFYDVAKAVVDSQNFENKMLKAYIRDWPAGQEEEGESKLP
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17492; Mature: 17492
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 7.7 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLDILRVKGNTLYTVQPDEPLAKATQIMADKDIGSLVVMEHGDLVGMLTFREVIVCIV CCHHHEEEECCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCEEHHHHHHHHHHHHH KNGGEIGNTLVRTAMDDHPLTCTSETELDEVRRMMLDRHARYMPVMNQKMLMGVISFYDV CCCCHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AKAVVDSQNFENKMLKAYIRDWPAGQEEEGESKLP HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKVLDILRVKGNTLYTVQPDEPLAKATQIMADKDIGSLVVMEHGDLVGMLTFREVIVCIV CCHHHEEEECCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCEEHHHHHHHHHHHHH KNGGEIGNTLVRTAMDDHPLTCTSETELDEVRRMMLDRHARYMPVMNQKMLMGVISFYDV CCCCHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AKAVVDSQNFENKMLKAYIRDWPAGQEEEGESKLP HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA