| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787685
Identifier: 91787685
GI number: 91787685
Start: 1867098
End: 1868060
Strand: Direct
Name: 91787685
Synonym: Bpro_1804
Alternate gene names: NA
Gene position: 1867098-1868060 (Clockwise)
Preceding gene: 91787684
Following gene: 91787686
Centisome position: 35.9
GC content: 59.29
Gene sequence:
>963_bases ATGGACTGGTTGGGCAATTTTTTTTCCGTGGTGCAGCAGTGGCTGTTCGAGGCCGCCGTGCAACCAGCCATGTTTGCGCT GGGCATGGGCAACCTGCTGGAAGACGGCTATGAAGCAACCGCCTGGTTCATGGTGGGGGTGATCCAGATCATCATTTTTC TGGCCGTGATTGGCCCCTTGCAACGCTGGCGGCCGGTCGAGCCGGTACTCGATCGGGCCACCATCCGTACCGATATTCTC TACACCCTCATACACCGGCTGGGCCTCTTTCGCATTGCGCTGTTTTTCACGCTGGAGCCCTGGTTTGACGAGGCCTTTGG CGCGCTGCGCACAGCCGGATACGGCACGTTTCACCTGGACCAGGTGTGGCCCGGCGTGACGGACCATGCGGTGGTCAGCC TGCTGATCTACCTGGTGGTGTTTGACTTTGTTGCCTACTGGACGCATCGCGGCCAGCACCAGATCGAGTGGTGGTGGCGC CTGCATTCGCTGCACCATGCCCAGCGGCAAATGACCATGTGGAGCGACAACCGCAACCACCTGCTCGACGATGTCCTGGT GGACTCCATCGTTGTGCTGGCGGCTCAGCTCATTGGCGTGCCCCCGGGCCAGTTCATTGCTATCGTGGCCTTTACCCAGC TCAGTGAAAGTTTTCAGCACGCCAATGTGCGGATGTGGTTTGGGCGCGTCGGCGAGCGGCTGTGGGTCAGCCCGCGTTTT CACCGCTTGCATCACAGCATCGGTATCGGGCATGAAACCGTGAAGGCGGAAAAAACTGTCTTGGGTGGACATAACTTTGG CGTGCTGCTGCCCTGGTGGGATGTGCTGTTTGGCACAGCTAACTTCGAGCAGCGTTATGACCCCACCGGTATCCGTGACC AGGTCGAAGCCAACCGTGATTACGGCAAAGGCTTCTGGTCGCAGCAATGGATTGGCCTCAAGCGCTTGTTCGGCAAAGCC TGA
Upstream 100 bases:
>100_bases GGGGATTTTGCTTTCAAACCCTGCGGGAACACCCCCAGTACAAGGCCTGGATTGAGGCGCAGGTCAGCCGCACGCCGGCC AAGCTTGCCAAATAAGCGAC
Downstream 100 bases:
>100_bases AAACCCACCCCCGTCCAGGCTCACTGCGTGTAGCCTGTTCCCCCCTCAAGGGGGCGGCGCCTGCGGTCTGGCGAAGCCAG TCCCGCGGCCCCTACCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Sterol Desaturase; Transmembrane Protein; Sterol Desaturase Family Protein; Sterol Desaturase-Related Protein; Sterol Desaturase-Like Protein; Fatty Acid Hydroxylase Superfamily; C-5 Sterol Desaturase
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MDWLGNFFSVVQQWLFEAAVQPAMFALGMGNLLEDGYEATAWFMVGVIQIIIFLAVIGPLQRWRPVEPVLDRATIRTDIL YTLIHRLGLFRIALFFTLEPWFDEAFGALRTAGYGTFHLDQVWPGVTDHAVVSLLIYLVVFDFVAYWTHRGQHQIEWWWR LHSLHHAQRQMTMWSDNRNHLLDDVLVDSIVVLAAQLIGVPPGQFIAIVAFTQLSESFQHANVRMWFGRVGERLWVSPRF HRLHHSIGIGHETVKAEKTVLGGHNFGVLLPWWDVLFGTANFEQRYDPTGIRDQVEANRDYGKGFWSQQWIGLKRLFGKA
Sequences:
>Translated_320_residues MDWLGNFFSVVQQWLFEAAVQPAMFALGMGNLLEDGYEATAWFMVGVIQIIIFLAVIGPLQRWRPVEPVLDRATIRTDIL YTLIHRLGLFRIALFFTLEPWFDEAFGALRTAGYGTFHLDQVWPGVTDHAVVSLLIYLVVFDFVAYWTHRGQHQIEWWWR LHSLHHAQRQMTMWSDNRNHLLDDVLVDSIVVLAAQLIGVPPGQFIAIVAFTQLSESFQHANVRMWFGRVGERLWVSPRF HRLHHSIGIGHETVKAEKTVLGGHNFGVLLPWWDVLFGTANFEQRYDPTGIRDQVEANRDYGKGFWSQQWIGLKRLFGKA >Mature_320_residues MDWLGNFFSVVQQWLFEAAVQPAMFALGMGNLLEDGYEATAWFMVGVIQIIIFLAVIGPLQRWRPVEPVLDRATIRTDIL YTLIHRLGLFRIALFFTLEPWFDEAFGALRTAGYGTFHLDQVWPGVTDHAVVSLLIYLVVFDFVAYWTHRGQHQIEWWWR LHSLHHAQRQMTMWSDNRNHLLDDVLVDSIVVLAAQLIGVPPGQFIAIVAFTQLSESFQHANVRMWFGRVGERLWVSPRF HRLHHSIGIGHETVKAEKTVLGGHNFGVLLPWWDVLFGTANFEQRYDPTGIRDQVEANRDYGKGFWSQQWIGLKRLFGKA
Specific function: Unknown
COG id: COG3000
COG function: function code I; Sterol desaturase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37025; Mature: 37025
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWLGNFFSVVQQWLFEAAVQPAMFALGMGNLLEDGYEATAWFMVGVIQIIIFLAVIGPL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH QRWRPVEPVLDRATIRTDILYTLIHRLGLFRIALFFTLEPWFDEAFGALRTAGYGTFHLD HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEHH QVWPGVTDHAVVSLLIYLVVFDFVAYWTHRGQHQIEWWWRLHSLHHAQRQMTMWSDNRNH HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH LLDDVLVDSIVVLAAQLIGVPPGQFIAIVAFTQLSESFQHANVRMWFGRVGERLWVSPRF HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCHHH HRLHHSIGIGHETVKAEKTVLGGHNFGVLLPWWDVLFGTANFEQRYDPTGIRDQVEANRD HHHHHHHCCCHHHHHHHHHEECCCCCEEEHHHHHHHHCCCCCHHCCCCCCCHHHHHCCCC YGKGFWSQQWIGLKRLFGKA CCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MDWLGNFFSVVQQWLFEAAVQPAMFALGMGNLLEDGYEATAWFMVGVIQIIIFLAVIGPL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH QRWRPVEPVLDRATIRTDILYTLIHRLGLFRIALFFTLEPWFDEAFGALRTAGYGTFHLD HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEHH QVWPGVTDHAVVSLLIYLVVFDFVAYWTHRGQHQIEWWWRLHSLHHAQRQMTMWSDNRNH HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH LLDDVLVDSIVVLAAQLIGVPPGQFIAIVAFTQLSESFQHANVRMWFGRVGERLWVSPRF HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCHHH HRLHHSIGIGHETVKAEKTVLGGHNFGVLLPWWDVLFGTANFEQRYDPTGIRDQVEANRD HHHHHHHCCCHHHHHHHHHEECCCCCEEEHHHHHHHHCCCCCHHCCCCCCCHHHHHCCCC YGKGFWSQQWIGLKRLFGKA CCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA