| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787660
Identifier: 91787660
GI number: 91787660
Start: 1836614
End: 1837216
Strand: Direct
Name: 91787660
Synonym: Bpro_1778
Alternate gene names: NA
Gene position: 1836614-1837216 (Clockwise)
Preceding gene: 91787659
Following gene: 91787661
Centisome position: 35.32
GC content: 60.03
Gene sequence:
>603_bases GTGTCTTACGTTCTTGATGCGCTTGCTACCGAAGCCAAGGCAAGCTCGCCGGGCGGCACGGCGACGGTGCTTCGCCGGTG GCTGGACTACACCTATTTGATGGCTGCCGCGCTGGGAGCCCTGTGCATCGCACTGATTTGCGTCCTGATGGTCGCCCAGT CGCTGGGTCGGCAGTTCGGCATCACAACCGGCGCGGTCAACGACATCGTGTCGTGGCTGTGCGCTGCAGCGGCGTTTTTC ACCATGGCGCATGCGTTCAAGCATGGCGACTTTGTGCGGGTGACCTTGTTGCTTGAACAGCTACAGCCCCGAGGCCGCAG GGCGCTTGAGTTAGCCAGTCTGTTTGTTGCGGTTTGCGCCGTGGGCTATCTTGCTTACTGGGCTTGCCGATTCACGTACC AGAGCTGGGAGTTCAACGAACTCGCTCAGGGTTTGTTGCCGCTGCCGATATGGATCCCACAGTCAAGTTTCGCGCTGGGC TCCGTGCTGCTGCTCATTGCCGTGGTGGATGAACTGGTCATTGTTCTGCGGGGTGGCGTTCCGACTTTTGTGCGCCTTGT CGAGGAGCGGCACGCCCAGGGCGATTTTTCGTCAGATCTTTGA
Upstream 100 bases:
>100_bases TGAAAGTCATTGGTGAACGCATGACGGCCGATTGGCTCAAGCTGGCGGGTGACGAAGGCAAGGCCATCGTTGACACCTAC AACAAGAAGTGAAGCAGCCT
Downstream 100 bases:
>100_bases GTCGTTTAAGTCAGGAAATACATCATGGACATTTTGACTATCGGCGGCATCCTGCTGTTTTTGATGCTGCTGCTCCTGTC GGGCGGGGTCTGGATTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; TRAP-Type C4-Dicarboxylate Transporter Small Permease
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSYVLDALATEAKASSPGGTATVLRRWLDYTYLMAAALGALCIALICVLMVAQSLGRQFGITTGAVNDIVSWLCAAAAFF TMAHAFKHGDFVRVTLLLEQLQPRGRRALELASLFVAVCAVGYLAYWACRFTYQSWEFNELAQGLLPLPIWIPQSSFALG SVLLLIAVVDELVIVLRGGVPTFVRLVEERHAQGDFSSDL
Sequences:
>Translated_200_residues MSYVLDALATEAKASSPGGTATVLRRWLDYTYLMAAALGALCIALICVLMVAQSLGRQFGITTGAVNDIVSWLCAAAAFF TMAHAFKHGDFVRVTLLLEQLQPRGRRALELASLFVAVCAVGYLAYWACRFTYQSWEFNELAQGLLPLPIWIPQSSFALG SVLLLIAVVDELVIVLRGGVPTFVRLVEERHAQGDFSSDL >Mature_199_residues SYVLDALATEAKASSPGGTATVLRRWLDYTYLMAAALGALCIALICVLMVAQSLGRQFGITTGAVNDIVSWLCAAAAFFT MAHAFKHGDFVRVTLLLEQLQPRGRRALELASLFVAVCAVGYLAYWACRFTYQSWEFNELAQGLLPLPIWIPQSSFALGS VLLLIAVVDELVIVLRGGVPTFVRLVEERHAQGDFSSDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21790; Mature: 21659
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVLDALATEAKASSPGGTATVLRRWLDYTYLMAAALGALCIALICVLMVAQSLGRQFG CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ITTGAVNDIVSWLCAAAAFFTMAHAFKHGDFVRVTLLLEQLQPRGRRALELASLFVAVCA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VGYLAYWACRFTYQSWEFNELAQGLLPLPIWIPQSSFALGSVLLLIAVVDELVIVLRGGV HHHHHHHHHHHHHCCCCHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCH PTFVRLVEERHAQGDFSSDL HHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SYVLDALATEAKASSPGGTATVLRRWLDYTYLMAAALGALCIALICVLMVAQSLGRQFG HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ITTGAVNDIVSWLCAAAAFFTMAHAFKHGDFVRVTLLLEQLQPRGRRALELASLFVAVCA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VGYLAYWACRFTYQSWEFNELAQGLLPLPIWIPQSSFALGSVLLLIAVVDELVIVLRGGV HHHHHHHHHHHHHCCCCHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCH PTFVRLVEERHAQGDFSSDL HHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA