| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787638
Identifier: 91787638
GI number: 91787638
Start: 1817497
End: 1818759
Strand: Direct
Name: 91787638
Synonym: Bpro_1756
Alternate gene names: NA
Gene position: 1817497-1818759 (Clockwise)
Preceding gene: 91787632
Following gene: 91787640
Centisome position: 34.95
GC content: 65.16
Gene sequence:
>1263_bases ATGGCCACCTCAGACCTGATCGATTCTTCCCAGATGCGCAGTGCCGGGCGGGAACTCCTGTCGCTGGCGCTGATGGATGC GCGCAATCATACGCTGCACCTCTTTGCCCAATACCAGAAGGCCCTGGAGGGCGTCAACTTCGTCGTGCCGCAGCTCGCCA CGATCAATCCGCCCCTGTGGGAGTTGGGCCATGTGGGCTGGTTTCAGGAGTGGTGGATCGGCCGCAACATGCAGCGTGCG CTGGGCACGCGCTGTGAGCCCGCCCACCCCCGGCTGGCGTCCATCGAGCCGAACGCGGACCGCTGGTGGGACTCCACCCA TGTGCCGGACGACACACGCTGGACGCTGGATGTGCCTGACATGGGCGGCTGCCGTGCCTATTTGCTGGACACGCTGGAAA GCACGCTGGATCTGCTCGACAAGGCTGCAGAGGAAGACCAGGCCCTGTACTTCTACCGGCTGTGTCTTTTCCATGAGGAC ATGCACGGCGAAGCTTTCGCCTACACCGCCCAGACGCTGGGCCTGCCGCTGGAGAAGCCCTTGCAGGAGGCATTGACCCC GGCACCGATGATGGTGCGCGAACCGTTGCTGATTCCGGCGACCGTCTGGCAAATGGGCAGCGCCGCCGGTGCCGAGGGCA ATGGCTTTGCCTTTGACAACGAGAAGGCCGTCCACCCCATCAGCGTGCCCGAGTTTGAAATTGACGCGCAACCCGTCACC TGGGCGCAGTTTGTCGAGTTTGTGGACGATGGCGGCTATGACCGCGAGGAACTCTGGCAGGCCGACGGCTGGCAGTGGCT GCAACGCCAGGCGGCGGGTGAGGGCCGCCGCGGCCCGCGCTACGTGGACCAGATCGGCGTGGCCAGCGGCGCCGTCATGC AGACCCGCTTTGGCCACCCCATGCGTATGCTCGGCAACCAGCCGGCCATGCACATGACGTGGTGGGAGGCCGACGCCTGG TGCCGCTGGGCCGGGCGCCGCCTGCCGGCCGAAGTCGAGTGGGAAGTTGCCGCCCACTCGGCGGCGCGGCGCGGCTTTCG CTGGGGTGATGTGTGGGAGTGGATGGGCACGACCTTTCGCCCCTACCCGGGTTTTGTGCCCGATCCTTACCGTGAATATT CGGAGCCCTGGTTTGGCAGCCACAAGGTGCTGCGTGGTGCCTCCGTGGCCACCCGTGCGCGCATGAAAAGCCCGAAATAC CGGAACTTCTACCCGCCCGAGCGCGATGACATCTTTTGTGGATTCCGATCCTGCTCGCTATAA
Upstream 100 bases:
>100_bases CGTTGTTGGCATCGGCCGTCGCCGGGCTTACGAGGACTATTGTTTTGGCTTCAGATTCCATACCCAACCCGTCATCCGGT TCGCCGGAAATTCACCCGCC
Downstream 100 bases:
>100_bases AAACAATAGCCCTTGCCCAATAATTGATTGGGTCAGGGCTCTTTTTTATTGTTTTTTTCCTTGCGGTAGTTCCACCACGG CAAGGTGGCGCGCAGGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MATSDLIDSSQMRSAGRELLSLALMDARNHTLHLFAQYQKALEGVNFVVPQLATINPPLWELGHVGWFQEWWIGRNMQRA LGTRCEPAHPRLASIEPNADRWWDSTHVPDDTRWTLDVPDMGGCRAYLLDTLESTLDLLDKAAEEDQALYFYRLCLFHED MHGEAFAYTAQTLGLPLEKPLQEALTPAPMMVREPLLIPATVWQMGSAAGAEGNGFAFDNEKAVHPISVPEFEIDAQPVT WAQFVEFVDDGGYDREELWQADGWQWLQRQAAGEGRRGPRYVDQIGVASGAVMQTRFGHPMRMLGNQPAMHMTWWEADAW CRWAGRRLPAEVEWEVAAHSAARRGFRWGDVWEWMGTTFRPYPGFVPDPYREYSEPWFGSHKVLRGASVATRARMKSPKY RNFYPPERDDIFCGFRSCSL
Sequences:
>Translated_420_residues MATSDLIDSSQMRSAGRELLSLALMDARNHTLHLFAQYQKALEGVNFVVPQLATINPPLWELGHVGWFQEWWIGRNMQRA LGTRCEPAHPRLASIEPNADRWWDSTHVPDDTRWTLDVPDMGGCRAYLLDTLESTLDLLDKAAEEDQALYFYRLCLFHED MHGEAFAYTAQTLGLPLEKPLQEALTPAPMMVREPLLIPATVWQMGSAAGAEGNGFAFDNEKAVHPISVPEFEIDAQPVT WAQFVEFVDDGGYDREELWQADGWQWLQRQAAGEGRRGPRYVDQIGVASGAVMQTRFGHPMRMLGNQPAMHMTWWEADAW CRWAGRRLPAEVEWEVAAHSAARRGFRWGDVWEWMGTTFRPYPGFVPDPYREYSEPWFGSHKVLRGASVATRARMKSPKY RNFYPPERDDIFCGFRSCSL >Mature_419_residues ATSDLIDSSQMRSAGRELLSLALMDARNHTLHLFAQYQKALEGVNFVVPQLATINPPLWELGHVGWFQEWWIGRNMQRAL GTRCEPAHPRLASIEPNADRWWDSTHVPDDTRWTLDVPDMGGCRAYLLDTLESTLDLLDKAAEEDQALYFYRLCLFHEDM HGEAFAYTAQTLGLPLEKPLQEALTPAPMMVREPLLIPATVWQMGSAAGAEGNGFAFDNEKAVHPISVPEFEIDAQPVTW AQFVEFVDDGGYDREELWQADGWQWLQRQAAGEGRRGPRYVDQIGVASGAVMQTRFGHPMRMLGNQPAMHMTWWEADAWC RWAGRRLPAEVEWEVAAHSAARRGFRWGDVWEWMGTTFRPYPGFVPDPYREYSEPWFGSHKVLRGASVATRARMKSPKYR NFYPPERDDIFCGFRSCSL
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48028; Mature: 47896
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSDLIDSSQMRSAGRELLSLALMDARNHTLHLFAQYQKALEGVNFVVPQLATINPPLW CCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH ELGHVGWFQEWWIGRNMQRALGTRCEPAHPRLASIEPNADRWWDSTHVPDDTRWTLDVPD HHCCCCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECCC MGGCRAYLLDTLESTLDLLDKAAEEDQALYFYRLCLFHEDMHGEAFAYTAQTLGLPLEKP CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCHHH LQEALTPAPMMVREPLLIPATVWQMGSAAGAEGNGFAFDNEKAVHPISVPEFEIDAQPVT HHHHCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCEECCCCCCC WAQFVEFVDDGGYDREELWQADGWQWLQRQAAGEGRRGPRYVDQIGVASGAVMQTRFGHP HHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHCCCH MRMLGNQPAMHMTWWEADAWCRWAGRRLPAEVEWEVAAHSAARRGFRWGDVWEWMGTTFR HHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCC PYPGFVPDPYREYSEPWFGSHKVLRGASVATRARMKSPKYRNFYPPERDDIFCGFRSCSL CCCCCCCCHHHHHCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEECHHCCCC >Mature Secondary Structure ATSDLIDSSQMRSAGRELLSLALMDARNHTLHLFAQYQKALEGVNFVVPQLATINPPLW CCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH ELGHVGWFQEWWIGRNMQRALGTRCEPAHPRLASIEPNADRWWDSTHVPDDTRWTLDVPD HHCCCCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECCC MGGCRAYLLDTLESTLDLLDKAAEEDQALYFYRLCLFHEDMHGEAFAYTAQTLGLPLEKP CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCHHH LQEALTPAPMMVREPLLIPATVWQMGSAAGAEGNGFAFDNEKAVHPISVPEFEIDAQPVT HHHHCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCEECCCCCCC WAQFVEFVDDGGYDREELWQADGWQWLQRQAAGEGRRGPRYVDQIGVASGAVMQTRFGHP HHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHCCCH MRMLGNQPAMHMTWWEADAWCRWAGRRLPAEVEWEVAAHSAARRGFRWGDVWEWMGTTFR HHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCC PYPGFVPDPYREYSEPWFGSHKVLRGASVATRARMKSPKYRNFYPPERDDIFCGFRSCSL CCCCCCCCHHHHHCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA