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The map label for this gene is ydfH [C]

Identifier: 91787597

GI number: 91787597

Start: 1768807

End: 1769499

Strand: Reverse

Name: ydfH [C]

Synonym: Bpro_1715

Alternate gene names: 91787597

Gene position: 1769499-1768807 (Counterclockwise)

Preceding gene: 91787599

Following gene: 91787596

Centisome position: 34.03

GC content: 67.53

Gene sequence:

>693_bases
ATGACTTCCCATCTCATCAAAATCGAATCAACCCCCGACCTGGTGGACCAGGTCTACCGCAGCCTGCTGGACGCCATCAG
CGACGGCTCCCTGGCGCCGGGTTCGCGCATCATGCAGGAAGATATTGCGGAGCGGCTGGCGGTGTCGCGCCAGCCGGTGC
TGCAGGCCCTGCGGCTGCTGAAAAAAGATGGCTTTGTGCTGGACGCGCCCGGCCGCGGAGTGCTGGTGGCGCCGCTCGAC
GTGGCCTGGCTGGTGCAGATTTACCAGGTGCGCGGCGCCCTGGACGCGCTGGCCGCCCGGCTGGCTGCACGTGCCCGCAG
CCCGCTGGACCCGCGCCTGATCAGCCAGGGTCGCGCTGCCGCACGCAGCAACAAGGTCAAGGCCATGATGGCGGCGGATG
CGCAGTTTCATGCTGCGATTTATGCCGCATCCGGCAACCCGCTGATCGCCCAGAGCGCGCAGCTGCATTGGCACCACATC
CGCCGCGCCATGGGCGCGGTGCTACAGGTGTCGACCATGCGCGAATCGATCTGGGATGAGCACGAGGCGATTGCCAACGC
GATAGGTCGCGGCGATGAAGAGGCGGCCGAAACCCTGATCCGCCAACACGACGAGGACGCCAGCCGCAACCTGGCGAGCC
TGCTGTCCAGCGCACTCAGCCAGCCCGCCCCTTCTGCGGCCCCTGCGCCCTGA

Upstream 100 bases:

>100_bases
CTGCCGCCATCTTGGCACAGTCGCACACGCCCCCGACCCCACGGGAAAACCCGGAGTAGCTTTTTTGCCATTTGGCGTAT
TCTGTATACAGAGTACAAAA

Downstream 100 bases:

>100_bases
GCCGCCACAAACACACCCACCCCAAGGAGACAAGCGATGAAACTGACCCCTGAACAACTCGCCCAATTTGACCGCGACGG
TTACCTGTTTTTTCCTGGCC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcription Regulator Protein

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTSHLIKIESTPDLVDQVYRSLLDAISDGSLAPGSRIMQEDIAERLAVSRQPVLQALRLLKKDGFVLDAPGRGVLVAPLD
VAWLVQIYQVRGALDALAARLAARARSPLDPRLISQGRAAARSNKVKAMMAADAQFHAAIYAASGNPLIAQSAQLHWHHI
RRAMGAVLQVSTMRESIWDEHEAIANAIGRGDEEAAETLIRQHDEDASRNLASLLSSALSQPAPSAAPAP

Sequences:

>Translated_230_residues
MTSHLIKIESTPDLVDQVYRSLLDAISDGSLAPGSRIMQEDIAERLAVSRQPVLQALRLLKKDGFVLDAPGRGVLVAPLD
VAWLVQIYQVRGALDALAARLAARARSPLDPRLISQGRAAARSNKVKAMMAADAQFHAAIYAASGNPLIAQSAQLHWHHI
RRAMGAVLQVSTMRESIWDEHEAIANAIGRGDEEAAETLIRQHDEDASRNLASLLSSALSQPAPSAAPAP
>Mature_229_residues
TSHLIKIESTPDLVDQVYRSLLDAISDGSLAPGSRIMQEDIAERLAVSRQPVLQALRLLKKDGFVLDAPGRGVLVAPLDV
AWLVQIYQVRGALDALAARLAARARSPLDPRLISQGRAAARSNKVKAMMAADAQFHAAIYAASGNPLIAQSAQLHWHHIR
RAMGAVLQVSTMRESIWDEHEAIANAIGRGDEEAAETLIRQHDEDASRNLASLLSSALSQPAPSAAPAP

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24709; Mature: 24577

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSHLIKIESTPDLVDQVYRSLLDAISDGSLAPGSRIMQEDIAERLAVSRQPVLQALRLL
CCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHH
KKDGFVLDAPGRGVLVAPLDVAWLVQIYQVRGALDALAARLAARARSPLDPRLISQGRAA
HHCCCEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ARSNKVKAMMAADAQFHAAIYAASGNPLIAQSAQLHWHHIRRAMGAVLQVSTMRESIWDE
HHHHHHHHHHHHCCHHHEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEAIANAIGRGDEEAAETLIRQHDEDASRNLASLLSSALSQPAPSAAPAP
HHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TSHLIKIESTPDLVDQVYRSLLDAISDGSLAPGSRIMQEDIAERLAVSRQPVLQALRLL
CCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHH
KKDGFVLDAPGRGVLVAPLDVAWLVQIYQVRGALDALAARLAARARSPLDPRLISQGRAA
HHCCCEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ARSNKVKAMMAADAQFHAAIYAASGNPLIAQSAQLHWHHIRRAMGAVLQVSTMRESIWDE
HHHHHHHHHHHHCCHHHEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEAIANAIGRGDEEAAETLIRQHDEDASRNLASLLSSALSQPAPSAAPAP
HHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA