| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787591
Identifier: 91787591
GI number: 91787591
Start: 1762593
End: 1763519
Strand: Reverse
Name: 91787591
Synonym: Bpro_1709
Alternate gene names: NA
Gene position: 1763519-1762593 (Counterclockwise)
Preceding gene: 91787592
Following gene: 91787590
Centisome position: 33.91
GC content: 59.33
Gene sequence:
>927_bases ATGAGTGATGTGAAGTGGACGGGCGGTGTGGAACACTGGACCCACAAGAAGACGCCCGAGGGCGATATCAAGCTGTTTCT CTGGGAGAAAAAAGCCTCGCCCAAGGTGCCGCATGCGGGCACTATTTTCTTTGTGCACGGCTCGTCAATGGCCTCGCAAC CGACCTTTGACCTGCACGTGCCTGGCCGGCCCTGGTCGTCGGCAATGGACTGGTTTTCGGACCAGGGCTTTAACACCTGG ACCATGGACAACGAGGGCTATGGCCGCTCGGACAAGCACCGCAACATCAACTTCGACATCAGCAACGGCGCCGACGATCT CGCCGCCGGCACCGAATACGCCATGAAGGTCTCCGGCGCTACGTCGCTGCTGATGTACGGCATTTCATCGGGTGCGCTCA AGGCAGGCCTGTTCACCGAACGGCATCCGGAGCGCATCGCCAAAGTCGCACTCGATGCGTTTGTGTGGACCGGCGAAGGC AGTCACACGCTGGAGCAACGCAGGAAAAAACTGCCGGAGTTCCTGGCCAGGAACCGGCGCCCGATTGACCGCCCTTTCGT CCACAGCATCTTTCAGCGCGACCATCCGGACACGGTGGAGCAGACAGTGGTCGAGGCATTTGCCGATGCCATCCTGACGC TGGACGACTCCATGCCCACCGGAACCTACGTGGACATGTGTTCCAGACTGCCGCTGCTGGACCCAAAGAAGCTGACCGTG CCCACCATCATCCTGCGCGGTGAGTACGACGGCATCGCCGGCATGGACGACCTGATCGACTACTTCAAGCTCTTGCCCAA CATGAACAAGCAGTTCAGCGTGATGCGCGGCATATCGCACGCGAGCTTCCAGCAGAAGAACTACATGATGGTCTACCAGA TCCTGCACAGCTTTTTCACCATGCCAGAGCCGGCATACAAGGGGTAA
Upstream 100 bases:
>100_bases GATTGACGGCATCGGCGCGATTGAAAACCGTTTTGTGTGAGCCCATCCGGGCATGAATCAAAAAAAGACGCCCTGCGGGG TGCCGTAACAGGAGACATTG
Downstream 100 bases:
>100_bases GACCATGAAAGCCATTGCCAGATCATTGTTGCTGGGCTCGCTGCTCGCGGTGTCCCTGTCTGCCGCATGGGCCCAGACCT ATCCGACCAAACCGGTCAAG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Hydrolase Or Acyltransferase
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSDVKWTGGVEHWTHKKTPEGDIKLFLWEKKASPKVPHAGTIFFVHGSSMASQPTFDLHVPGRPWSSAMDWFSDQGFNTW TMDNEGYGRSDKHRNINFDISNGADDLAAGTEYAMKVSGATSLLMYGISSGALKAGLFTERHPERIAKVALDAFVWTGEG SHTLEQRRKKLPEFLARNRRPIDRPFVHSIFQRDHPDTVEQTVVEAFADAILTLDDSMPTGTYVDMCSRLPLLDPKKLTV PTIILRGEYDGIAGMDDLIDYFKLLPNMNKQFSVMRGISHASFQQKNYMMVYQILHSFFTMPEPAYKG
Sequences:
>Translated_308_residues MSDVKWTGGVEHWTHKKTPEGDIKLFLWEKKASPKVPHAGTIFFVHGSSMASQPTFDLHVPGRPWSSAMDWFSDQGFNTW TMDNEGYGRSDKHRNINFDISNGADDLAAGTEYAMKVSGATSLLMYGISSGALKAGLFTERHPERIAKVALDAFVWTGEG SHTLEQRRKKLPEFLARNRRPIDRPFVHSIFQRDHPDTVEQTVVEAFADAILTLDDSMPTGTYVDMCSRLPLLDPKKLTV PTIILRGEYDGIAGMDDLIDYFKLLPNMNKQFSVMRGISHASFQQKNYMMVYQILHSFFTMPEPAYKG >Mature_307_residues SDVKWTGGVEHWTHKKTPEGDIKLFLWEKKASPKVPHAGTIFFVHGSSMASQPTFDLHVPGRPWSSAMDWFSDQGFNTWT MDNEGYGRSDKHRNINFDISNGADDLAAGTEYAMKVSGATSLLMYGISSGALKAGLFTERHPERIAKVALDAFVWTGEGS HTLEQRRKKLPEFLARNRRPIDRPFVHSIFQRDHPDTVEQTVVEAFADAILTLDDSMPTGTYVDMCSRLPLLDPKKLTVP TIILRGEYDGIAGMDDLIDYFKLLPNMNKQFSVMRGISHASFQQKNYMMVYQILHSFFTMPEPAYKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34815; Mature: 34684
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVKWTGGVEHWTHKKTPEGDIKLFLWEKKASPKVPHAGTIFFVHGSSMASQPTFDLHV CCCCCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEC PGRPWSSAMDWFSDQGFNTWTMDNEGYGRSDKHRNINFDISNGADDLAAGTEYAMKVSGA CCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCCHHHHCCCHHEEEECCH TSLLMYGISSGALKAGLFTERHPERIAKVALDAFVWTGEGSHTLEQRRKKLPEFLARNRR HEEHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCC PIDRPFVHSIFQRDHPDTVEQTVVEAFADAILTLDDSMPTGTYVDMCSRLPLLDPKKLTV CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHCCCCCCCCCCCC PTIILRGEYDGIAGMDDLIDYFKLLPNMNKQFSVMRGISHASFQQKNYMMVYQILHSFFT CEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHC MPEPAYKG CCCCCCCC >Mature Secondary Structure SDVKWTGGVEHWTHKKTPEGDIKLFLWEKKASPKVPHAGTIFFVHGSSMASQPTFDLHV CCCCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEC PGRPWSSAMDWFSDQGFNTWTMDNEGYGRSDKHRNINFDISNGADDLAAGTEYAMKVSGA CCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCCHHHHCCCHHEEEECCH TSLLMYGISSGALKAGLFTERHPERIAKVALDAFVWTGEGSHTLEQRRKKLPEFLARNRR HEEHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCC PIDRPFVHSIFQRDHPDTVEQTVVEAFADAILTLDDSMPTGTYVDMCSRLPLLDPKKLTV CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHCCCCCCCCCCCC PTIILRGEYDGIAGMDDLIDYFKLLPNMNKQFSVMRGISHASFQQKNYMMVYQILHSFFT CEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHC MPEPAYKG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA