Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787587

Identifier: 91787587

GI number: 91787587

Start: 1757307

End: 1758797

Strand: Reverse

Name: 91787587

Synonym: Bpro_1705

Alternate gene names: NA

Gene position: 1758797-1757307 (Counterclockwise)

Preceding gene: 91787588

Following gene: 91787586

Centisome position: 33.82

GC content: 62.84

Gene sequence:

>1491_bases
ATGCAGCACACCACGATTCGCGGCAAGGTGCATCGCGACAACAGCGGCGTGGTCACGGAAATCCCCATCATCCTGACCGA
GCACGGCCCCTTGCAGCCGCTGGTCGACTACCTGTTGGCGCATGTGCAGGTGCGCAGCCATGCGTGGATGCTCAAGGTTA
CGCAAGCGGTCGGCCTCCTGATCGACTACATGGCTGCCAACCATGACTGTTTCGACGATCCCAAGGACTTGTTCGAAACC
TTTACGCAGCGTCTCTACACGGGCACCGTGGGCGACGACGGCAACGATCCCAGCGGGCTCTACTGGCAGGGACGCAACCC
GGCGGTCGTGCGGCCCTTGGTGCAGGGCATCTCGGGGTTCTCGGACTGGATGGCACAAACCCAGGGCAGCAAGCCGCTCA
ACCCGTGGCGCCAGGCCACGCGCAGCGAAGAAATGCTGGCCTGGGCGGCGTGGCATCAGAAGCGCGACCGCGCCTTTCTG
GCGCACAGCTGGGATCGGGAAACCGCGTCGCTCGCCATGACCCGCGCCCGCAACGTCCTGCTCAAGCGCACGCCTGTGAT
TGACCATGAACCGGTCAAGAAGTTTCCCGAGGATCGCATCCACGATCTGCTGTTCAAGGGCTTCATTGTGCCGGGCAAAC
AGAAAAGCCCGCGTCTGGAAGAACGGCTGAACCTGCGCGACATCCTGATCACCATGCTGATGCACTACGGCGGGCTGCGC
ATGTCCGAGCCCTTTCATCTCTATGTGCGGGACGTGGTGTCCGAATCCAGGCGTCCAGCCGACCCCATCCGTCCGGATCG
GGCCTTGGTGCACATCTACCACCCGAGTCTGGGTACCGCCCCGCCCGATTGGCTGGATGCCAGGGGCAAGCCCATCAAGT
GCAACCGTCTGGCCTACTTGAACGGCAAGTACGCGATGCGGCCACGCGACGAATACGCCAGCAGCGACCAGTGGCACGCC
GGCTGGAAAGGCAATGCGCTCGACTCCAAAGGACACTTCATGTATGTCAATTGGTATCCACCATGGGCGGGGGAGTTGTT
CTGGAAGCTATGGTTTCTGTACATGGCGCAGCGGGCGCAACTGGAATGTGACCATCCCTTTGCCTTCGTGACCAGGGAGG
GCAAACCCTATGCCATCGACTCGTTCGAGCGTCAGCATCGGCGCGCCGTGGAGCGCATTGGGCTGCAAGCTGCCAAAGCC
CTGGGCACCTCGCCGCACGGGCATCGCCATGCCTACGGCCAGGCGCTGGCCGATGCCAAGATTGACCCGATCTACCGCAA
GAAGGCGCTGCACCACAAGTCGCTTGAATCGCAGGTGGTCTATACCGAGCCGGATCGGGCCAGGCTCGTGCGCGCACTGG
AGGCCGCCGCCGAGCGCGAGAAGGCCGGCACGGTACTGCCGCCACCCGACCTGCTGCGCTATGGCTTCAAGGACGTCGAC
CCGCTGGGACTGATGAGCGGTCCGAACCCGAAATTGTTGAGGAAAAACTGA

Upstream 100 bases:

>100_bases
TGGAAGCGGCCAAAACAGCCATACGAGCGCCGCGCCATTCGGATCGCCGGCATGTCGCGTTGGGCGCGTTGCTGCGTGAG
CAGTTCGAGAGGATGGTCTG

Downstream 100 bases:

>100_bases
GATGGCCAAAAAAATTAAGGGAACCGATCAAAGCTTCGACCCCGGGTTCCGCTTCCTGCTGGCCCTCGATCCGGCCTTCG
AGGACTGGCGGGTGCTGGCC

Product: phage integrase

Products: NA

Alternate protein names: Phage Integrase; Integrase Family Protein; Site-Specific Recombinase; DNA Integration Protein; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MQHTTIRGKVHRDNSGVVTEIPIILTEHGPLQPLVDYLLAHVQVRSHAWMLKVTQAVGLLIDYMAANHDCFDDPKDLFET
FTQRLYTGTVGDDGNDPSGLYWQGRNPAVVRPLVQGISGFSDWMAQTQGSKPLNPWRQATRSEEMLAWAAWHQKRDRAFL
AHSWDRETASLAMTRARNVLLKRTPVIDHEPVKKFPEDRIHDLLFKGFIVPGKQKSPRLEERLNLRDILITMLMHYGGLR
MSEPFHLYVRDVVSESRRPADPIRPDRALVHIYHPSLGTAPPDWLDARGKPIKCNRLAYLNGKYAMRPRDEYASSDQWHA
GWKGNALDSKGHFMYVNWYPPWAGELFWKLWFLYMAQRAQLECDHPFAFVTREGKPYAIDSFERQHRRAVERIGLQAAKA
LGTSPHGHRHAYGQALADAKIDPIYRKKALHHKSLESQVVYTEPDRARLVRALEAAAEREKAGTVLPPPDLLRYGFKDVD
PLGLMSGPNPKLLRKN

Sequences:

>Translated_496_residues
MQHTTIRGKVHRDNSGVVTEIPIILTEHGPLQPLVDYLLAHVQVRSHAWMLKVTQAVGLLIDYMAANHDCFDDPKDLFET
FTQRLYTGTVGDDGNDPSGLYWQGRNPAVVRPLVQGISGFSDWMAQTQGSKPLNPWRQATRSEEMLAWAAWHQKRDRAFL
AHSWDRETASLAMTRARNVLLKRTPVIDHEPVKKFPEDRIHDLLFKGFIVPGKQKSPRLEERLNLRDILITMLMHYGGLR
MSEPFHLYVRDVVSESRRPADPIRPDRALVHIYHPSLGTAPPDWLDARGKPIKCNRLAYLNGKYAMRPRDEYASSDQWHA
GWKGNALDSKGHFMYVNWYPPWAGELFWKLWFLYMAQRAQLECDHPFAFVTREGKPYAIDSFERQHRRAVERIGLQAAKA
LGTSPHGHRHAYGQALADAKIDPIYRKKALHHKSLESQVVYTEPDRARLVRALEAAAEREKAGTVLPPPDLLRYGFKDVD
PLGLMSGPNPKLLRKN
>Mature_496_residues
MQHTTIRGKVHRDNSGVVTEIPIILTEHGPLQPLVDYLLAHVQVRSHAWMLKVTQAVGLLIDYMAANHDCFDDPKDLFET
FTQRLYTGTVGDDGNDPSGLYWQGRNPAVVRPLVQGISGFSDWMAQTQGSKPLNPWRQATRSEEMLAWAAWHQKRDRAFL
AHSWDRETASLAMTRARNVLLKRTPVIDHEPVKKFPEDRIHDLLFKGFIVPGKQKSPRLEERLNLRDILITMLMHYGGLR
MSEPFHLYVRDVVSESRRPADPIRPDRALVHIYHPSLGTAPPDWLDARGKPIKCNRLAYLNGKYAMRPRDEYASSDQWHA
GWKGNALDSKGHFMYVNWYPPWAGELFWKLWFLYMAQRAQLECDHPFAFVTREGKPYAIDSFERQHRRAVERIGLQAAKA
LGTSPHGHRHAYGQALADAKIDPIYRKKALHHKSLESQVVYTEPDRARLVRALEAAAEREKAGTVLPPPDLLRYGFKDVD
PLGLMSGPNPKLLRKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56835; Mature: 56835

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHTTIRGKVHRDNSGVVTEIPIILTEHGPLQPLVDYLLAHVQVRSHAWMLKVTQAVGLL
CCCCEEECEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDYMAANHDCFDDPKDLFETFTQRLYTGTVGDDGNDPSGLYWQGRNPAVVRPLVQGISGF
HHHHHCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
SDWMAQTQGSKPLNPWRQATRSEEMLAWAAWHQKRDRAFLAHSWDRETASLAMTRARNVL
HHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHH
LKRTPVIDHEPVKKFPEDRIHDLLFKGFIVPGKQKSPRLEERLNLRDILITMLMHYGGLR
HHCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCC
MSEPFHLYVRDVVSESRRPADPIRPDRALVHIYHPSLGTAPPDWLDARGKPIKCNRLAYL
CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCEEECEEEEE
NGKYAMRPRDEYASSDQWHAGWKGNALDSKGHFMYVNWYPPWAGELFWKLWFLYMAQRAQ
CCCEECCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHC
LECDHPFAFVTREGKPYAIDSFERQHRRAVERIGLQAAKALGTSPHGHRHAYGQALADAK
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
IDPIYRKKALHHKSLESQVVYTEPDRARLVRALEAAAEREKAGTVLPPPDLLRYGFKDVD
CCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC
PLGLMSGPNPKLLRKN
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQHTTIRGKVHRDNSGVVTEIPIILTEHGPLQPLVDYLLAHVQVRSHAWMLKVTQAVGLL
CCCCEEECEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDYMAANHDCFDDPKDLFETFTQRLYTGTVGDDGNDPSGLYWQGRNPAVVRPLVQGISGF
HHHHHCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
SDWMAQTQGSKPLNPWRQATRSEEMLAWAAWHQKRDRAFLAHSWDRETASLAMTRARNVL
HHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHH
LKRTPVIDHEPVKKFPEDRIHDLLFKGFIVPGKQKSPRLEERLNLRDILITMLMHYGGLR
HHCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCC
MSEPFHLYVRDVVSESRRPADPIRPDRALVHIYHPSLGTAPPDWLDARGKPIKCNRLAYL
CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCEEECEEEEE
NGKYAMRPRDEYASSDQWHAGWKGNALDSKGHFMYVNWYPPWAGELFWKLWFLYMAQRAQ
CCCEECCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHC
LECDHPFAFVTREGKPYAIDSFERQHRRAVERIGLQAAKALGTSPHGHRHAYGQALADAK
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
IDPIYRKKALHHKSLESQVVYTEPDRARLVRALEAAAEREKAGTVLPPPDLLRYGFKDVD
CCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC
PLGLMSGPNPKLLRKN
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA