| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is msrA [H]
Identifier: 91787556
GI number: 91787556
Start: 1727752
End: 1728294
Strand: Direct
Name: msrA [H]
Synonym: Bpro_1674
Alternate gene names: 91787556
Gene position: 1727752-1728294 (Clockwise)
Preceding gene: 91787555
Following gene: 91787558
Centisome position: 33.22
GC content: 61.51
Gene sequence:
>543_bases ATGCCCTCATCCCCCCAAACCATCACGCTAGGCGGCGGCTGCTTCTGGTGCACCGAGGCGGTGTACGTCAAGGTGCGAGG CGTCACCGACGTCGAATCGGGCTACAGCAACGGCCAGGCCGAGCGCCCCAGTTACGACGACGTGTGCACCGGGCGCACCG GCTGCAACGAGGTCGTCAAGCTGACCTATGACCCCGAGGAAATCTCGCTGCGTGAAATCCTCGAAATTTTCTTCGTGATC CACGACCCGACCAGCCTGAACCGGCAGGGCAACGATGCGGGCACGCAGTACCGCAGCGGCATCTATTACTCGACGCCCGA GCAAAAGCAGGTGGCCGACGACTTCATTCGCCAGGCCAGCCAGGACAAGCTGTTTGGCAATCCCATCGTGACGGAAGTGC TGCCGCTGGCCAATTACTGGCCGGCCGAGGCCTACCACCAGGACTATTTCGAGAACAATCCCAACCAGGGCTATTGCGCC TTTGTGGTGGGCCCGAAGGTGGAGAAGTTCCGCAAGACCTTTGCCTCGCGCGTGAAGGACTGA
Upstream 100 bases:
>100_bases AAGGGCAAGGGGCCCCGCACGGCATTCGCGTGGCCTGCGGCGTAAGATCATCGCTCTCTTTACGACCAACGATGACCAAC GGTTTCAAGCGGAGATTTCC
Downstream 100 bases:
>100_bases GGGTCAAGCTGAGGGGCATACGCATTGCCTCCTGATGCGGTTCCTTCCCCCAGCGGGGGAAGGAGGAGGAAGGGGTGGGA CATCAGGCGCCAGTTCACGG
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPSSPQTITLGGGCFWCTEAVYVKVRGVTDVESGYSNGQAERPSYDDVCTGRTGCNEVVKLTYDPEEISLREILEIFFVI HDPTSLNRQGNDAGTQYRSGIYYSTPEQKQVADDFIRQASQDKLFGNPIVTEVLPLANYWPAEAYHQDYFENNPNQGYCA FVVGPKVEKFRKTFASRVKD
Sequences:
>Translated_180_residues MPSSPQTITLGGGCFWCTEAVYVKVRGVTDVESGYSNGQAERPSYDDVCTGRTGCNEVVKLTYDPEEISLREILEIFFVI HDPTSLNRQGNDAGTQYRSGIYYSTPEQKQVADDFIRQASQDKLFGNPIVTEVLPLANYWPAEAYHQDYFENNPNQGYCA FVVGPKVEKFRKTFASRVKD >Mature_179_residues PSSPQTITLGGGCFWCTEAVYVKVRGVTDVESGYSNGQAERPSYDDVCTGRTGCNEVVKLTYDPEEISLREILEIFFVIH DPTSLNRQGNDAGTQYRSGIYYSTPEQKQVADDFIRQASQDKLFGNPIVTEVLPLANYWPAEAYHQDYFENNPNQGYCAF VVGPKVEKFRKTFASRVKD
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=163, Percent_Identity=39.2638036809816, Blast_Score=127, Evalue=7e-30, Organism=Homo sapiens, GI208609995, Length=164, Percent_Identity=39.0243902439024, Blast_Score=127, Evalue=7e-30, Organism=Homo sapiens, GI208609993, Length=113, Percent_Identity=42.4778761061947, Blast_Score=91, Evalue=5e-19, Organism=Escherichia coli, GI1790665, Length=157, Percent_Identity=37.5796178343949, Blast_Score=114, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17533973, Length=141, Percent_Identity=30.4964539007092, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320881, Length=166, Percent_Identity=43.3734939759036, Blast_Score=128, Evalue=5e-31, Organism=Drosophila melanogaster, GI24664627, Length=164, Percent_Identity=34.1463414634146, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24664631, Length=164, Percent_Identity=34.1463414634146, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI45553131, Length=158, Percent_Identity=33.5443037974684, Blast_Score=83, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 20261; Mature: 20129
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSPQTITLGGGCFWCTEAVYVKVRGVTDVESGYSNGQAERPSYDDVCTGRTGCNEVVK CCCCCCEEEECCCHHEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE LTYDPEEISLREILEIFFVIHDPTSLNRQGNDAGTQYRSGIYYSTPEQKQVADDFIRQAS EEECCHHCCHHHHHHHHHHEECCCCCCCCCCCCCHHHHCCEEECCCCHHHHHHHHHHHHH QDKLFGNPIVTEVLPLANYWPAEAYHQDYFENNPNQGYCAFVVGPKVEKFRKTFASRVKD CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure PSSPQTITLGGGCFWCTEAVYVKVRGVTDVESGYSNGQAERPSYDDVCTGRTGCNEVVK CCCCCEEEECCCHHEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE LTYDPEEISLREILEIFFVIHDPTSLNRQGNDAGTQYRSGIYYSTPEQKQVADDFIRQAS EEECCHHCCHHHHHHHHHHEECCCCCCCCCCCCCHHHHCCEEECCCCHHHHHHHHHHHHH QDKLFGNPIVTEVLPLANYWPAEAYHQDYFENNPNQGYCAFVVGPKVEKFRKTFASRVKD CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA