| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787545
Identifier: 91787545
GI number: 91787545
Start: 1715531
End: 1716010
Strand: Direct
Name: 91787545
Synonym: Bpro_1663
Alternate gene names: NA
Gene position: 1715531-1716010 (Clockwise)
Preceding gene: 91787541
Following gene: 91787554
Centisome position: 32.99
GC content: 61.04
Gene sequence:
>480_bases ATGCGTACCCGAACCCTCATCGGCCGCTCATTGCAGCTGGCTCTGTTGTTCGTCCTGGGCCTTGTCGGCTCATTCGCGCT TGCCCAGGCGCCTGCCCAGGAGCAGGCGCTGACACGGACGGCCCGTGATGCGCAGCTCAAGTGGAGCCCTTGCCCGCCGT TCTTGCCCAAAGGATGCGCGATCGCCGTTCTTCATGGTGATCCTGCGAAAGAGAACGCGGATCTCTTCTTCAAGGTGCCT GCCAAGTCGACCATTCCGCTCCATTGGCACACGTCGGCGGAGCGCATGATCCTCGTGGCAGGTGAGCTTCATGTCACCTA TGACGGCCAGAAAACAGCCGTTCTCAAGCCCGGGACTTACGCCTACGGCCCCCCCAAAGTACCGCACAAGGGCTTCTGCG CAAGCACCAGCGCCTGCATCCTCTTCATTGCCTTTGTATCGCCGCTGGACGCAGTGCCCGTCGAGAACAAAGGGAAGTAA
Upstream 100 bases:
>100_bases GGCGGGGTTATCCTCCAATTGGAGGATGGGATGCCCGGCACATCGCACCTAGACTCGGCTCTTCACCACTGCCGGTTTCA ACCAAAAGGAGAACTGACCT
Downstream 100 bases:
>100_bases CGTACGTGGCCTTATCGGCCCTTGCCTTGTTTGTTGGGCACTTGGTACTTGGTACTTGCTACTTGCTACTTGCTATTTGC CGTTGGCTATTTGACCAGCA
Product: cupin 2 barrel-domain containing protein
Products: NA
Alternate protein names: Cupin 2 Barrel; Signal Peptide Protein; Cupin 2 Conserved Barrel Domain Protein
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MRTRTLIGRSLQLALLFVLGLVGSFALAQAPAQEQALTRTARDAQLKWSPCPPFLPKGCAIAVLHGDPAKENADLFFKVP AKSTIPLHWHTSAERMILVAGELHVTYDGQKTAVLKPGTYAYGPPKVPHKGFCASTSACILFIAFVSPLDAVPVENKGK
Sequences:
>Translated_159_residues MRTRTLIGRSLQLALLFVLGLVGSFALAQAPAQEQALTRTARDAQLKWSPCPPFLPKGCAIAVLHGDPAKENADLFFKVP AKSTIPLHWHTSAERMILVAGELHVTYDGQKTAVLKPGTYAYGPPKVPHKGFCASTSACILFIAFVSPLDAVPVENKGK >Mature_159_residues MRTRTLIGRSLQLALLFVLGLVGSFALAQAPAQEQALTRTARDAQLKWSPCPPFLPKGCAIAVLHGDPAKENADLFFKVP AKSTIPLHWHTSAERMILVAGELHVTYDGQKTAVLKPGTYAYGPPKVPHKGFCASTSACILFIAFVSPLDAVPVENKGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17090; Mature: 17090
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRTLIGRSLQLALLFVLGLVGSFALAQAPAQEQALTRTARDAQLKWSPCPPFLPKGCA CCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCE IAVLHGDPAKENADLFFKVPAKSTIPLHWHTSAERMILVAGELHVTYDGQKTAVLKPGTY EEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECEEEEEECCCEEEEECCCCC AYGPPKVPHKGFCASTSACILFIAFVSPLDAVPVENKGK CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRTRTLIGRSLQLALLFVLGLVGSFALAQAPAQEQALTRTARDAQLKWSPCPPFLPKGCA CCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCE IAVLHGDPAKENADLFFKVPAKSTIPLHWHTSAERMILVAGELHVTYDGQKTAVLKPGTY EEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECEEEEEECCCEEEEECCCCC AYGPPKVPHKGFCASTSACILFIAFVSPLDAVPVENKGK CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA