Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is insG [H]

Identifier: 91787543

GI number: 91787543

Start: 1712930

End: 1714306

Strand: Reverse

Name: insG [H]

Synonym: Bpro_1661

Alternate gene names: 91787543

Gene position: 1714306-1712930 (Counterclockwise)

Preceding gene: 91787544

Following gene: 91787542

Centisome position: 32.97

GC content: 61.87

Gene sequence:

>1377_bases
ATGGATCGTAACGCCCGAAACGCTTTTCATCAACGTCAAGTCCGTATCAAACGCCAGACCAAGGCGACGCATGCGGTGGA
GTTCTTCAACGTACTGACGAGTCCTGAGTTGCTGGAGACGACCGAGGCGCTGCTGCCCGAGCACCGCGAGCGGCTGTATC
CGCCCACGGTTGCACTGTCGATGTTCATGCGCCAGGTGCTGGAGGCTGATGGCTCGTGCCAGAAGGCGGTCAATGGCTGG
GCCGCGCAACGCGCGGCCGATGGTTTGAGGCCATGCAGCGTTCGTACCGGCGGGTACTGCCGGGCTCGCCAGCGCCTGCC
GCTGGAGATGGTCGGTACGCTGACACGCGAAACAGGCCGCTTGCTCCACGAGAAGGCGCTGGCGCAATGGCTATGGCGTG
GGCGCGCGGTCAAGCTGGTGGACGGCACCGGCATCTCGATGCCCGATACTCCCGAGAACCAGGAACGTTATCCCCAGCCC
CGCACCCAGGCGCCTGGAGTAGGCTTTCCGCTGGCGCGACTGGTCATGGTGATTTGTCTGGCAACCGGCGCGGCGCTGGA
TATGGCGGTAGGGCCACACAGCGGCAAGGGCAGCGGCGAACTCGGGCTTGTGCGCCGTCTGCTCGCAGGCTTCTGCCCAG
GTGATGTGATGCTTGCCGATGCCCTGTACTGCAACTATTTCTTGATCGCCTCCCTGATGGCCGCAGGCGTGGATGTGTTG
TTCGAGCAAAACGGATCGCGCATCACCGACTTTCGCCGTGGTCAGTCGCTGGGACCACGCGATCACATCGTGCGCTGGCC
TAAACCGCCCCGCCCAGAGTGGATGACGCCTGAGCAGTACACGGGCTTTCCCGATGAGCTAACGGTGCGCGAAGTCAAAG
TAGCTCACCAGGTATTGGTCACCACACTGCTTGACCATCGCAAGGTCAGCAAGAACGATCTCTCGGCGCTGTACGCGCGT
CGCTGGAACGTCGAACTCGATCTGCGCAACCTCAAGACCACCACGGGCATGGATGTGCTGAGCTGCCAGACGCCGCAGAT
GAACGAAAAACAGCTATGGGTTCATCTGCTGGCCTACAACGTGATTCGGTTGCTCATGGCGCAGGCCGCCCGCAATGTCG
GCATAGACCCGCGTGAGCTGAGCTTCAAGCACACCGTACAACTGTGGACCGAGTGGGTCTCGCGCGGTCTGTCGGCCACG
AAGGAAGGCGGGCGGCTGTTCACATTGATCGCCCAGTGCAGGGTGGGCAATCGATCCGCACGCATGGAGCCGCGAATGCG
AAAGCGACGACCCAAACCCTACCCGTGGCTAAAGGTCCCGCGTGCGTATGCTCGCCGGAAAATCAAGATACATGGTCACG
ACTGGGAGCCAAAGTAA

Upstream 100 bases:

>100_bases
TAAGCACGTGAATTTGAATGCAAAAGGAGGTGGCTGACCCGTGGATTGATAGGATGGTTGTTACTACGCACCCAAACCAT
CTTTCCGAAGGCCAACCACC

Downstream 100 bases:

>100_bases
GTGCCATTCCCCTTAAGGCCACGTAGCATTACAAACGGGGACCATCCCACGACTTCGCTCAACAACGAGCCGGGCATCGC
CGTGACACAGGCTTCGCATG

Product: IS4 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MDRNARNAFHQRQVRIKRQTKATHAVEFFNVLTSPELLETTEALLPEHRERLYPPTVALSMFMRQVLEADGSCQKAVNGW
AAQRAADGLRPCSVRTGGYCRARQRLPLEMVGTLTRETGRLLHEKALAQWLWRGRAVKLVDGTGISMPDTPENQERYPQP
RTQAPGVGFPLARLVMVICLATGAALDMAVGPHSGKGSGELGLVRRLLAGFCPGDVMLADALYCNYFLIASLMAAGVDVL
FEQNGSRITDFRRGQSLGPRDHIVRWPKPPRPEWMTPEQYTGFPDELTVREVKVAHQVLVTTLLDHRKVSKNDLSALYAR
RWNVELDLRNLKTTTGMDVLSCQTPQMNEKQLWVHLLAYNVIRLLMAQAARNVGIDPRELSFKHTVQLWTEWVSRGLSAT
KEGGRLFTLIAQCRVGNRSARMEPRMRKRRPKPYPWLKVPRAYARRKIKIHGHDWEPK

Sequences:

>Translated_458_residues
MDRNARNAFHQRQVRIKRQTKATHAVEFFNVLTSPELLETTEALLPEHRERLYPPTVALSMFMRQVLEADGSCQKAVNGW
AAQRAADGLRPCSVRTGGYCRARQRLPLEMVGTLTRETGRLLHEKALAQWLWRGRAVKLVDGTGISMPDTPENQERYPQP
RTQAPGVGFPLARLVMVICLATGAALDMAVGPHSGKGSGELGLVRRLLAGFCPGDVMLADALYCNYFLIASLMAAGVDVL
FEQNGSRITDFRRGQSLGPRDHIVRWPKPPRPEWMTPEQYTGFPDELTVREVKVAHQVLVTTLLDHRKVSKNDLSALYAR
RWNVELDLRNLKTTTGMDVLSCQTPQMNEKQLWVHLLAYNVIRLLMAQAARNVGIDPRELSFKHTVQLWTEWVSRGLSAT
KEGGRLFTLIAQCRVGNRSARMEPRMRKRRPKPYPWLKVPRAYARRKIKIHGHDWEPK
>Mature_458_residues
MDRNARNAFHQRQVRIKRQTKATHAVEFFNVLTSPELLETTEALLPEHRERLYPPTVALSMFMRQVLEADGSCQKAVNGW
AAQRAADGLRPCSVRTGGYCRARQRLPLEMVGTLTRETGRLLHEKALAQWLWRGRAVKLVDGTGISMPDTPENQERYPQP
RTQAPGVGFPLARLVMVICLATGAALDMAVGPHSGKGSGELGLVRRLLAGFCPGDVMLADALYCNYFLIASLMAAGVDVL
FEQNGSRITDFRRGQSLGPRDHIVRWPKPPRPEWMTPEQYTGFPDELTVREVKVAHQVLVTTLLDHRKVSKNDLSALYAR
RWNVELDLRNLKTTTGMDVLSCQTPQMNEKQLWVHLLAYNVIRLLMAQAARNVGIDPRELSFKHTVQLWTEWVSRGLSAT
KEGGRLFTLIAQCRVGNRSARMEPRMRKRRPKPYPWLKVPRAYARRKIKIHGHDWEPK

Specific function: Involved in the transposition of the insertion sequence IS4 [H]

COG id: COG3385

COG function: function code L; FOG: Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1790729, Length=369, Percent_Identity=27.10027100271, Blast_Score=96, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 52004; Mature: 52004

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRNARNAFHQRQVRIKRQTKATHAVEFFNVLTSPELLETTEALLPEHRERLYPPTVALS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH
MFMRQVLEADGSCQKAVNGWAAQRAADGLRPCSVRTGGYCRARQRLPLEMVGTLTRETGR
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHH
LLHEKALAQWLWRGRAVKLVDGTGISMPDTPENQERYPQPRTQAPGVGFPLARLVMVICL
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHH
ATGAALDMAVGPHSGKGSGELGLVRRLLAGFCPGDVMLADALYCNYFLIASLMAAGVDVL
HCCCHHEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHE
FEQNGSRITDFRRGQSLGPRDHIVRWPKPPRPEWMTPEQYTGFPDELTVREVKVAHQVLV
ECCCCCCCHHHHCCCCCCCHHCEEECCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHH
TTLLDHRKVSKNDLSALYARRWNVELDLRNLKTTTGMDVLSCQTPQMNEKQLWVHLLAYN
HHHHHHHCCCHHHHHHHHHHHCCCEEEHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHH
VIRLLMAQAARNVGIDPRELSFKHTVQLWTEWVSRGLSATKEGGRLFTLIAQCRVGNRSA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCCC
RMEPRMRKRRPKPYPWLKVPRAYARRKIKIHGHDWEPK
CCCCHHHHCCCCCCCCEECCHHHHCCEEEEECCCCCCC
>Mature Secondary Structure
MDRNARNAFHQRQVRIKRQTKATHAVEFFNVLTSPELLETTEALLPEHRERLYPPTVALS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH
MFMRQVLEADGSCQKAVNGWAAQRAADGLRPCSVRTGGYCRARQRLPLEMVGTLTRETGR
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHH
LLHEKALAQWLWRGRAVKLVDGTGISMPDTPENQERYPQPRTQAPGVGFPLARLVMVICL
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHH
ATGAALDMAVGPHSGKGSGELGLVRRLLAGFCPGDVMLADALYCNYFLIASLMAAGVDVL
HCCCHHEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHE
FEQNGSRITDFRRGQSLGPRDHIVRWPKPPRPEWMTPEQYTGFPDELTVREVKVAHQVLV
ECCCCCCCHHHHCCCCCCCHHCEEECCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHH
TTLLDHRKVSKNDLSALYARRWNVELDLRNLKTTTGMDVLSCQTPQMNEKQLWVHLLAYN
HHHHHHHCCCHHHHHHHHHHHCCCEEEHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHH
VIRLLMAQAARNVGIDPRELSFKHTVQLWTEWVSRGLSATKEGGRLFTLIAQCRVGNRSA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCCC
RMEPRMRKRRPKPYPWLKVPRAYARRKIKIHGHDWEPK
CCCCHHHHCCCCCCCCEECCHHHHCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6268937; 7610040; 9278503 [H]