| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is insG [H]
Identifier: 91787543
GI number: 91787543
Start: 1712930
End: 1714306
Strand: Reverse
Name: insG [H]
Synonym: Bpro_1661
Alternate gene names: 91787543
Gene position: 1714306-1712930 (Counterclockwise)
Preceding gene: 91787544
Following gene: 91787542
Centisome position: 32.97
GC content: 61.87
Gene sequence:
>1377_bases ATGGATCGTAACGCCCGAAACGCTTTTCATCAACGTCAAGTCCGTATCAAACGCCAGACCAAGGCGACGCATGCGGTGGA GTTCTTCAACGTACTGACGAGTCCTGAGTTGCTGGAGACGACCGAGGCGCTGCTGCCCGAGCACCGCGAGCGGCTGTATC CGCCCACGGTTGCACTGTCGATGTTCATGCGCCAGGTGCTGGAGGCTGATGGCTCGTGCCAGAAGGCGGTCAATGGCTGG GCCGCGCAACGCGCGGCCGATGGTTTGAGGCCATGCAGCGTTCGTACCGGCGGGTACTGCCGGGCTCGCCAGCGCCTGCC GCTGGAGATGGTCGGTACGCTGACACGCGAAACAGGCCGCTTGCTCCACGAGAAGGCGCTGGCGCAATGGCTATGGCGTG GGCGCGCGGTCAAGCTGGTGGACGGCACCGGCATCTCGATGCCCGATACTCCCGAGAACCAGGAACGTTATCCCCAGCCC CGCACCCAGGCGCCTGGAGTAGGCTTTCCGCTGGCGCGACTGGTCATGGTGATTTGTCTGGCAACCGGCGCGGCGCTGGA TATGGCGGTAGGGCCACACAGCGGCAAGGGCAGCGGCGAACTCGGGCTTGTGCGCCGTCTGCTCGCAGGCTTCTGCCCAG GTGATGTGATGCTTGCCGATGCCCTGTACTGCAACTATTTCTTGATCGCCTCCCTGATGGCCGCAGGCGTGGATGTGTTG TTCGAGCAAAACGGATCGCGCATCACCGACTTTCGCCGTGGTCAGTCGCTGGGACCACGCGATCACATCGTGCGCTGGCC TAAACCGCCCCGCCCAGAGTGGATGACGCCTGAGCAGTACACGGGCTTTCCCGATGAGCTAACGGTGCGCGAAGTCAAAG TAGCTCACCAGGTATTGGTCACCACACTGCTTGACCATCGCAAGGTCAGCAAGAACGATCTCTCGGCGCTGTACGCGCGT CGCTGGAACGTCGAACTCGATCTGCGCAACCTCAAGACCACCACGGGCATGGATGTGCTGAGCTGCCAGACGCCGCAGAT GAACGAAAAACAGCTATGGGTTCATCTGCTGGCCTACAACGTGATTCGGTTGCTCATGGCGCAGGCCGCCCGCAATGTCG GCATAGACCCGCGTGAGCTGAGCTTCAAGCACACCGTACAACTGTGGACCGAGTGGGTCTCGCGCGGTCTGTCGGCCACG AAGGAAGGCGGGCGGCTGTTCACATTGATCGCCCAGTGCAGGGTGGGCAATCGATCCGCACGCATGGAGCCGCGAATGCG AAAGCGACGACCCAAACCCTACCCGTGGCTAAAGGTCCCGCGTGCGTATGCTCGCCGGAAAATCAAGATACATGGTCACG ACTGGGAGCCAAAGTAA
Upstream 100 bases:
>100_bases TAAGCACGTGAATTTGAATGCAAAAGGAGGTGGCTGACCCGTGGATTGATAGGATGGTTGTTACTACGCACCCAAACCAT CTTTCCGAAGGCCAACCACC
Downstream 100 bases:
>100_bases GTGCCATTCCCCTTAAGGCCACGTAGCATTACAAACGGGGACCATCCCACGACTTCGCTCAACAACGAGCCGGGCATCGC CGTGACACAGGCTTCGCATG
Product: IS4 family transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MDRNARNAFHQRQVRIKRQTKATHAVEFFNVLTSPELLETTEALLPEHRERLYPPTVALSMFMRQVLEADGSCQKAVNGW AAQRAADGLRPCSVRTGGYCRARQRLPLEMVGTLTRETGRLLHEKALAQWLWRGRAVKLVDGTGISMPDTPENQERYPQP RTQAPGVGFPLARLVMVICLATGAALDMAVGPHSGKGSGELGLVRRLLAGFCPGDVMLADALYCNYFLIASLMAAGVDVL FEQNGSRITDFRRGQSLGPRDHIVRWPKPPRPEWMTPEQYTGFPDELTVREVKVAHQVLVTTLLDHRKVSKNDLSALYAR RWNVELDLRNLKTTTGMDVLSCQTPQMNEKQLWVHLLAYNVIRLLMAQAARNVGIDPRELSFKHTVQLWTEWVSRGLSAT KEGGRLFTLIAQCRVGNRSARMEPRMRKRRPKPYPWLKVPRAYARRKIKIHGHDWEPK
Sequences:
>Translated_458_residues MDRNARNAFHQRQVRIKRQTKATHAVEFFNVLTSPELLETTEALLPEHRERLYPPTVALSMFMRQVLEADGSCQKAVNGW AAQRAADGLRPCSVRTGGYCRARQRLPLEMVGTLTRETGRLLHEKALAQWLWRGRAVKLVDGTGISMPDTPENQERYPQP RTQAPGVGFPLARLVMVICLATGAALDMAVGPHSGKGSGELGLVRRLLAGFCPGDVMLADALYCNYFLIASLMAAGVDVL FEQNGSRITDFRRGQSLGPRDHIVRWPKPPRPEWMTPEQYTGFPDELTVREVKVAHQVLVTTLLDHRKVSKNDLSALYAR RWNVELDLRNLKTTTGMDVLSCQTPQMNEKQLWVHLLAYNVIRLLMAQAARNVGIDPRELSFKHTVQLWTEWVSRGLSAT KEGGRLFTLIAQCRVGNRSARMEPRMRKRRPKPYPWLKVPRAYARRKIKIHGHDWEPK >Mature_458_residues MDRNARNAFHQRQVRIKRQTKATHAVEFFNVLTSPELLETTEALLPEHRERLYPPTVALSMFMRQVLEADGSCQKAVNGW AAQRAADGLRPCSVRTGGYCRARQRLPLEMVGTLTRETGRLLHEKALAQWLWRGRAVKLVDGTGISMPDTPENQERYPQP RTQAPGVGFPLARLVMVICLATGAALDMAVGPHSGKGSGELGLVRRLLAGFCPGDVMLADALYCNYFLIASLMAAGVDVL FEQNGSRITDFRRGQSLGPRDHIVRWPKPPRPEWMTPEQYTGFPDELTVREVKVAHQVLVTTLLDHRKVSKNDLSALYAR RWNVELDLRNLKTTTGMDVLSCQTPQMNEKQLWVHLLAYNVIRLLMAQAARNVGIDPRELSFKHTVQLWTEWVSRGLSAT KEGGRLFTLIAQCRVGNRSARMEPRMRKRRPKPYPWLKVPRAYARRKIKIHGHDWEPK
Specific function: Involved in the transposition of the insertion sequence IS4 [H]
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1790729, Length=369, Percent_Identity=27.10027100271, Blast_Score=96, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 52004; Mature: 52004
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRNARNAFHQRQVRIKRQTKATHAVEFFNVLTSPELLETTEALLPEHRERLYPPTVALS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH MFMRQVLEADGSCQKAVNGWAAQRAADGLRPCSVRTGGYCRARQRLPLEMVGTLTRETGR HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHH LLHEKALAQWLWRGRAVKLVDGTGISMPDTPENQERYPQPRTQAPGVGFPLARLVMVICL HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHH ATGAALDMAVGPHSGKGSGELGLVRRLLAGFCPGDVMLADALYCNYFLIASLMAAGVDVL HCCCHHEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHE FEQNGSRITDFRRGQSLGPRDHIVRWPKPPRPEWMTPEQYTGFPDELTVREVKVAHQVLV ECCCCCCCHHHHCCCCCCCHHCEEECCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHH TTLLDHRKVSKNDLSALYARRWNVELDLRNLKTTTGMDVLSCQTPQMNEKQLWVHLLAYN HHHHHHHCCCHHHHHHHHHHHCCCEEEHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHH VIRLLMAQAARNVGIDPRELSFKHTVQLWTEWVSRGLSATKEGGRLFTLIAQCRVGNRSA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCCC RMEPRMRKRRPKPYPWLKVPRAYARRKIKIHGHDWEPK CCCCHHHHCCCCCCCCEECCHHHHCCEEEEECCCCCCC >Mature Secondary Structure MDRNARNAFHQRQVRIKRQTKATHAVEFFNVLTSPELLETTEALLPEHRERLYPPTVALS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH MFMRQVLEADGSCQKAVNGWAAQRAADGLRPCSVRTGGYCRARQRLPLEMVGTLTRETGR HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHH LLHEKALAQWLWRGRAVKLVDGTGISMPDTPENQERYPQPRTQAPGVGFPLARLVMVICL HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHH ATGAALDMAVGPHSGKGSGELGLVRRLLAGFCPGDVMLADALYCNYFLIASLMAAGVDVL HCCCHHEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHE FEQNGSRITDFRRGQSLGPRDHIVRWPKPPRPEWMTPEQYTGFPDELTVREVKVAHQVLV ECCCCCCCHHHHCCCCCCCHHCEEECCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHH TTLLDHRKVSKNDLSALYARRWNVELDLRNLKTTTGMDVLSCQTPQMNEKQLWVHLLAYN HHHHHHHCCCHHHHHHHHHHHCCCEEEHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHH VIRLLMAQAARNVGIDPRELSFKHTVQLWTEWVSRGLSATKEGGRLFTLIAQCRVGNRSA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCCC RMEPRMRKRRPKPYPWLKVPRAYARRKIKIHGHDWEPK CCCCHHHHCCCCCCCCEECCHHHHCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6268937; 7610040; 9278503 [H]