| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787540
Identifier: 91787540
GI number: 91787540
Start: 1709788
End: 1710390
Strand: Reverse
Name: 91787540
Synonym: Bpro_1658
Alternate gene names: NA
Gene position: 1710390-1709788 (Counterclockwise)
Preceding gene: 91787542
Following gene: 91787539
Centisome position: 32.89
GC content: 61.69
Gene sequence:
>603_bases ATGAGCTATCACCTGGAAGGTCGTCTGCTCGAGGTTTGCAACTGCAACGTCCTGTGCCCCTGCTGGATCGGTGAGGATCC GGACAACGGCACCTGCGACACCATCGTCGCGTGGCGCATTGACAAGGGAACGGTCGACGGCGTCGATGTGGGCGGCAACA CCATTGCAGCCGTGGCCCATGTGCCCGGCAATATCCTGGAAGGCAACTGGAGAGCCGCGATCTTTGTCGACGACAAGGCT TCCAAGGAACAGGAAGAGGCACTGCTCAAGGTCTACACCGGCCAGGCCGGCGGCCCGGTGGCCGATCTTGCCAAGCTCAT CGGCGAGGTGGTGTCGGTGGAACGGGCGCCAATCCGCTTCACCGTCGAGGAGGGCAAGGGCATACTCGAGATCGGCAAGA ACTACTTCGCTGAACTTGAGCCATACCGTGGTGCGATGGGTGGGCTGACCACGCTATCCGACACCGTGTTCTCGACGGTG CCGGGGGCGCCGGTGTTTGTCGGCAAGGCCCCGACCTACCGATCCAAAAACGCCGCGCTCGGCATTGACCTCGACATCAA GAACCACAACGCCCTGCAGAGCACCTTCGTCTTCGATGCATGA
Upstream 100 bases:
>100_bases GAACTTGACTTGGCCCACCCCGCGGCGGAAAATCATTTTTCCTTGCCGCCGCGAGCCAAGACGACAAGTCCCTGTTCATG TGGCTCCCATGGAGGTTCGT
Downstream 100 bases:
>100_bases GCCATCGGCCGCTCCCAAGGCGACAACGAAGTTGCGGCGAAGACTCACAATTGCGCGAAGCGCTTGTTACGTCGTAGCCA ATACAACAGCGCGTAGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSYHLEGRLLEVCNCNVLCPCWIGEDPDNGTCDTIVAWRIDKGTVDGVDVGGNTIAAVAHVPGNILEGNWRAAIFVDDKA SKEQEEALLKVYTGQAGGPVADLAKLIGEVVSVERAPIRFTVEEGKGILEIGKNYFAELEPYRGAMGGLTTLSDTVFSTV PGAPVFVGKAPTYRSKNAALGIDLDIKNHNALQSTFVFDA
Sequences:
>Translated_200_residues MSYHLEGRLLEVCNCNVLCPCWIGEDPDNGTCDTIVAWRIDKGTVDGVDVGGNTIAAVAHVPGNILEGNWRAAIFVDDKA SKEQEEALLKVYTGQAGGPVADLAKLIGEVVSVERAPIRFTVEEGKGILEIGKNYFAELEPYRGAMGGLTTLSDTVFSTV PGAPVFVGKAPTYRSKNAALGIDLDIKNHNALQSTFVFDA >Mature_199_residues SYHLEGRLLEVCNCNVLCPCWIGEDPDNGTCDTIVAWRIDKGTVDGVDVGGNTIAAVAHVPGNILEGNWRAAIFVDDKAS KEQEEALLKVYTGQAGGPVADLAKLIGEVVSVERAPIRFTVEEGKGILEIGKNYFAELEPYRGAMGGLTTLSDTVFSTVP GAPVFVGKAPTYRSKNAALGIDLDIKNHNALQSTFVFDA
Specific function: Unknown
COG id: COG5588
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21341; Mature: 21210
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYHLEGRLLEVCNCNVLCPCWIGEDPDNGTCDTIVAWRIDKGTVDGVDVGGNTIAAVAH CCEECCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEECCCCEEEEEEE VPGNILEGNWRAAIFVDDKASKEQEEALLKVYTGQAGGPVADLAKLIGEVVSVERAPIRF CCCCEEECCEEEEEEECCCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE TVEEGKGILEIGKNYFAELEPYRGAMGGLTTLSDTVFSTVPGAPVFVGKAPTYRSKNAAL EECCCCCEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEE GIDLDIKNHNALQSTFVFDA EEEEEECCCCCEEEEEEECC >Mature Secondary Structure SYHLEGRLLEVCNCNVLCPCWIGEDPDNGTCDTIVAWRIDKGTVDGVDVGGNTIAAVAH CEECCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEECCCCEEEEEEE VPGNILEGNWRAAIFVDDKASKEQEEALLKVYTGQAGGPVADLAKLIGEVVSVERAPIRF CCCCEEECCEEEEEEECCCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE TVEEGKGILEIGKNYFAELEPYRGAMGGLTTLSDTVFSTVPGAPVFVGKAPTYRSKNAAL EECCCCCEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEE GIDLDIKNHNALQSTFVFDA EEEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA