Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91787527

Identifier: 91787527

GI number: 91787527

Start: 1699621

End: 1699932

Strand: Direct

Name: 91787527

Synonym: Bpro_1645

Alternate gene names: NA

Gene position: 1699621-1699932 (Clockwise)

Preceding gene: 91787526

Following gene: 91787528

Centisome position: 32.68

GC content: 56.41

Gene sequence:

>312_bases
ATGTCTGCGGACTTCACCAAGTCAGAGCGCCGCCAGTTGCGTGAACTCGCAGCAGAGGTGTATGAAGCCGAGGCGCACGC
CCTCCTGGAAGAACTAGACGAAGACTTCGCCCGTTGGCGAAAGGACGAAATCCGTAGCTCTGATCTGCTGATGTCCATTC
ACGACTTCCATCAGCATCAGTCGAGGGAGCTTTGGAGCATGTACCAAGGACTTAGCGACGACATGGCGGTGGAGCGCGGT
CTCCGCCTCGGCTTGATAGCTGAAGAACGGCTCTCGCCCAAGGTACTTTTCAAATTGCGGTCGAAGGGTTAG

Upstream 100 bases:

>100_bases
CCGCATAACATATCAATCGACACGGACCCACAACAGCAGGAGGCGGCTTCGCCGCAAGTGTTGGTGGTCCGGTCATTTTC
ACGTTGGGCCTCATAGAACG

Downstream 100 bases:

>100_bases
AGTGCAGGCTGTGGCGTCACTCCAAGCGAGCTCCGCATGAGGCCCAACAGGTCAGTCAACACGGCCGTGCAGAAACCCAT
AGGTCACGCCACGTACCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSADFTKSERRQLRELAAEVYEAEAHALLEELDEDFARWRKDEIRSSDLLMSIHDFHQHQSRELWSMYQGLSDDMAVERG
LRLGLIAEERLSPKVLFKLRSKG

Sequences:

>Translated_103_residues
MSADFTKSERRQLRELAAEVYEAEAHALLEELDEDFARWRKDEIRSSDLLMSIHDFHQHQSRELWSMYQGLSDDMAVERG
LRLGLIAEERLSPKVLFKLRSKG
>Mature_102_residues
SADFTKSERRQLRELAAEVYEAEAHALLEELDEDFARWRKDEIRSSDLLMSIHDFHQHQSRELWSMYQGLSDDMAVERGL
RLGLIAEERLSPKVLFKLRSKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12121; Mature: 11990

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADFTKSERRQLRELAAEVYEAEAHALLEELDEDFARWRKDEIRSSDLLMSIHDFHQHQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
SRELWSMYQGLSDDMAVERGLRLGLIAEERLSPKVLFKLRSKG
HHHHHHHHCCCCHHHHHHHCCHHCCHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure 
SADFTKSERRQLRELAAEVYEAEAHALLEELDEDFARWRKDEIRSSDLLMSIHDFHQHQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
SRELWSMYQGLSDDMAVERGLRLGLIAEERLSPKVLFKLRSKG
HHHHHHHHCCCCHHHHHHHCCHHCCHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA