| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is paaF [C]
Identifier: 91787513
GI number: 91787513
Start: 1685574
End: 1686404
Strand: Direct
Name: paaF [C]
Synonym: Bpro_1631
Alternate gene names: 91787513
Gene position: 1685574-1686404 (Clockwise)
Preceding gene: 91787512
Following gene: 91787514
Centisome position: 32.41
GC content: 67.15
Gene sequence:
>831_bases ATGAAAGTCTCCATAGCGCCTTCCGGCAACCGTTCGAGTCATGCCATGAAAAATCTGACCCTCTCATCCCGCGCCCCCGG CGTGGCTCAAGTCACCATGTCCCGCCCGGCGGTGTTCAACGCCTTTGACGAGGCGATGATCACTGAACTGGAAACGGCCT TCACCCAGCTTGCGGCCGATCCGGCCGTGCGCGTGATCGTGCTGGCGGGCGAAGGCCGGCATTTCAGCGCCGGTGCCGAT CTGCAATGGATGCAGCGCGCCAGCACCGCCTCCCGCGAATGGAACCTGGACGATGCGCGCCGCTTTGCCGGCATGCTGGC GTGCATTGAGTCGTGCCCCAAGCCCACGGTGGCAAGGGTGCAGGGCGCGGCGTTGGGTGGCGGCGTGGGCCTGGTCTGCG CCTGCGACCTGGCGATTGCGGCCGACAACGCCAGCTTCGCGGTCAGCGAGGCGAGGTTCGGCATCTTGCCCGCGGTGATC GGCCCCTATGTGGTCAACGCGGTGGGCAGGCGCCACGCCAGGCGCCTGGCGCTGACGACCACGCGCATCCCTGCCGCCGA GGCACTGGCCATCGGGCTGGTGCAGCAGGTGGTTGGGCTGGACGCGCTCGATGCGGCGCTGGATGCCGCCATTGCCGAGC TGCTGGTCGGCGGGCCAGGCGCACAGCGTGAAATCAAGCAGCTGTTTGCCCAGCTTGAAGTCGGGCCGATCACGAATGAG GTGCGCGAGTTGACCGCGCAAACGATCAGCCGCGTGCGGGGTACCGACGAGGCCCGCGAAGGCTTTGCGGCCTTTCTGGG AAAGCGGCCACCGAACTGGATGGCGCAATGA
Upstream 100 bases:
>100_bases ACACCGTTCGGGCTGAGCCTGGCCTGTCCTGAGCTTGTCGAAGTGGCGAAGCCCTTCGACAGGCTCAGGGCGAACGGTAG CGAAGTGCCTGTCAAGATTT
Downstream 100 bases:
>100_bases CCATGAACTCGACAGTCAACAAGCTCGACGAGGCGCCCCTGCTGGTGGTCGGCGCCGGTGTCATGGGGGTCGGTATTGCG CAGGTGGCGGCACAGGCCGG
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKVSIAPSGNRSSHAMKNLTLSSRAPGVAQVTMSRPAVFNAFDEAMITELETAFTQLAADPAVRVIVLAGEGRHFSAGAD LQWMQRASTASREWNLDDARRFAGMLACIESCPKPTVARVQGAALGGGVGLVCACDLAIAADNASFAVSEARFGILPAVI GPYVVNAVGRRHARRLALTTTRIPAAEALAIGLVQQVVGLDALDAALDAAIAELLVGGPGAQREIKQLFAQLEVGPITNE VRELTAQTISRVRGTDEAREGFAAFLGKRPPNWMAQ
Sequences:
>Translated_276_residues MKVSIAPSGNRSSHAMKNLTLSSRAPGVAQVTMSRPAVFNAFDEAMITELETAFTQLAADPAVRVIVLAGEGRHFSAGAD LQWMQRASTASREWNLDDARRFAGMLACIESCPKPTVARVQGAALGGGVGLVCACDLAIAADNASFAVSEARFGILPAVI GPYVVNAVGRRHARRLALTTTRIPAAEALAIGLVQQVVGLDALDAALDAAIAELLVGGPGAQREIKQLFAQLEVGPITNE VRELTAQTISRVRGTDEAREGFAAFLGKRPPNWMAQ >Mature_276_residues MKVSIAPSGNRSSHAMKNLTLSSRAPGVAQVTMSRPAVFNAFDEAMITELETAFTQLAADPAVRVIVLAGEGRHFSAGAD LQWMQRASTASREWNLDDARRFAGMLACIESCPKPTVARVQGAALGGGVGLVCACDLAIAADNASFAVSEARFGILPAVI GPYVVNAVGRRHARRLALTTTRIPAAEALAIGLVQQVVGLDALDAALDAAIAELLVGGPGAQREIKQLFAQLEVGPITNE VRELTAQTISRVRGTDEAREGFAAFLGKRPPNWMAQ
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI70995211, Length=206, Percent_Identity=33.0097087378641, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI194097323, Length=252, Percent_Identity=30.1587301587302, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI31542718, Length=257, Percent_Identity=28.4046692607004, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI37594469, Length=183, Percent_Identity=27.8688524590164, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI37594471, Length=183, Percent_Identity=27.8688524590164, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4502327, Length=260, Percent_Identity=32.6923076923077, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI68989263, Length=181, Percent_Identity=29.8342541436464, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI260274832, Length=270, Percent_Identity=23.3333333333333, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI45643119, Length=195, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI260275230, Length=195, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI157694516, Length=214, Percent_Identity=24.7663551401869, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI213417737, Length=214, Percent_Identity=24.7663551401869, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787659, Length=254, Percent_Identity=33.0708661417323, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1788597, Length=268, Percent_Identity=30.5970149253731, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI221142681, Length=269, Percent_Identity=32.3420074349442, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787660, Length=267, Percent_Identity=29.5880149812734, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI87082183, Length=259, Percent_Identity=25.4826254826255, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788682, Length=201, Percent_Identity=28.3582089552239, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI25145438, Length=271, Percent_Identity=30.2583025830258, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17536985, Length=204, Percent_Identity=32.843137254902, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17554946, Length=284, Percent_Identity=27.8169014084507, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17534483, Length=203, Percent_Identity=27.0935960591133, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17540714, Length=196, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17549921, Length=182, Percent_Identity=30.2197802197802, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17540306, Length=240, Percent_Identity=27.9166666666667, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17558304, Length=166, Percent_Identity=30.7228915662651, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17560910, Length=190, Percent_Identity=30.5263157894737, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17535521, Length=251, Percent_Identity=25.0996015936255, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25144276, Length=156, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17508951, Length=156, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17508953, Length=156, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI19920382, Length=196, Percent_Identity=35.2040816326531, Blast_Score=103, Evalue=9e-23, Organism=Drosophila melanogaster, GI20129971, Length=264, Percent_Identity=30.3030303030303, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24653477, Length=264, Percent_Identity=30.3030303030303, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24653139, Length=287, Percent_Identity=29.9651567944251, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI19922422, Length=265, Percent_Identity=22.6415094339623, Blast_Score=86, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 29028; Mature: 29028
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSIAPSGNRSSHAMKNLTLSSRAPGVAQVTMSRPAVFNAFDEAMITELETAFTQLAAD CEEECCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC PAVRVIVLAGEGRHFSAGADLQWMQRASTASREWNLDDARRFAGMLACIESCPKPTVARV CCEEEEEEECCCCEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH QGAALGGGVGLVCACDLAIAADNASFAVSEARFGILPAVIGPYVVNAVGRRHARRLALTT CCCCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRIPAAEALAIGLVQQVVGLDALDAALDAAIAELLVGGPGAQREIKQLFAQLEVGPITNE CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH VRELTAQTISRVRGTDEAREGFAAFLGKRPPNWMAQ HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKVSIAPSGNRSSHAMKNLTLSSRAPGVAQVTMSRPAVFNAFDEAMITELETAFTQLAAD CEEECCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC PAVRVIVLAGEGRHFSAGADLQWMQRASTASREWNLDDARRFAGMLACIESCPKPTVARV CCEEEEEEECCCCEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH QGAALGGGVGLVCACDLAIAADNASFAVSEARFGILPAVIGPYVVNAVGRRHARRLALTT CCCCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRIPAAEALAIGLVQQVVGLDALDAALDAAIAELLVGGPGAQREIKQLFAQLEVGPITNE CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH VRELTAQTISRVRGTDEAREGFAAFLGKRPPNWMAQ HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA