Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787499

Identifier: 91787499

GI number: 91787499

Start: 1668947

End: 1670101

Strand: Reverse

Name: 91787499

Synonym: Bpro_1617

Alternate gene names: NA

Gene position: 1670101-1668947 (Counterclockwise)

Preceding gene: 91787500

Following gene: 91787497

Centisome position: 32.12

GC content: 58.01

Gene sequence:

>1155_bases
ATGAAAAAAATCTCCTCGCCTCTCCTCGCCCGGCTTCTTCTCGCCACACTCTGCAGTTTTTCCAGCGCCGGCCACGCTGC
GCAGGAGATTGTTTTTGGGCAGGTTGCATCGCAAACCAACCCGGCGTCGGCAGCCAACGCCAAGGGCCTTGCCGTTGGCA
TCCAGACTTACTTCGCCAAAGTCAACGCCAAAGGCGGCATCGCGGGCAACAAGCTCAAGCTGGTGACGCTTGACGATGAC
CTGCAGGGCCCGAAAATGCTGGAACTGACCCAGCAGCTGGTTGCCGACCCCTCCATTGTTGGCCTGCTGGGCTTCCTCAA
CAGCGCAGGGCTGGCTGAAATGGCCAAACAGGATTTGCCCGTGAAGGCGGGCATCGCGTTGATCACACCGCTTCAGGGTG
ACAAGCATGTGATCAGCGCCGGAAATGTATTTCCTCTGCGCAGTGGTTACGCGGACGAAGTCACTGCCTTGCTCAAGGAA
GCAAAGAGTTGGGACAAGAACGAAGTCGCGATCGTCAACATGAACATTGCTTTTGGACCGCCCCTGGCCCAACTGGCAAT
CCAGCAGGCCAATGCACAAGGCCTGAAAATCGCTACCCATCAAGTGATTGATGTCAGTCCCGCAGCATTTGACGCCAGCG
TTAAAGCGGCGGTTGCAGCAGTGTCGAAGTCCCAGCCGAAAGCAGTCCTGGTGCTGGCCGCCGGCAAACCCGCCTCTGAA
TTCATCAGGGCCTTCCGCGAGGCACCGGGTGGCGCTACCCAGGTCTATGGGCTGTCTGTACTGTTGCACGACGCGCTGGT
CAACGCCGTTGGCGCAGACAAGGCGCGGGGTATCGTGTTGAGCCAGGCGGTTCCCTACCCCTTCATTCCAAGCAAGGCCG
TCATCAACGAATACCTGACGGACATGAATAAATATGCGGCAGGACAGCCACTCTCCTTCTCCAGCCTTGAGGGCTACCTG
GGCGCCAAGATAGCCGCAGAAGCAGTGCACCGGGCAGGCAGTCAACCCACACGAGCGAAAGTCCTGGCGGCATTGACGAA
CCTGGGTGAGTTCGATCTGGGTGGACTCTATGTCAAATACACGCCAGTCAAACGCCAGGGCTGGGGAGGCGTGGAGCTTT
CAATCATCAATGGCCAGGGAGCGCTAAAAAAATAA

Upstream 100 bases:

>100_bases
ACGCCAGGCCTGAACTGCTTGAGCTGTATCTGGGGGTTTGAGCATGCGAGCCTTCGCTTGCATGCTCTGGCCATTTTCCT
GAATTCAAAAAAACATTGGC

Downstream 100 bases:

>100_bases
CGCGCCAGGCGACAGAGCGTTTTCAGGATGCCCTTGCGGGCTGGCTGTTACTGACTCGCACCTTGTACATCACACAGAGC
GATGAATGCTGGCAACCCCA

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: Abc-Type Branched-Chain Amino Acid Transport Systems

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKKISSPLLARLLLATLCSFSSAGHAAQEIVFGQVASQTNPASAANAKGLAVGIQTYFAKVNAKGGIAGNKLKLVTLDDD
LQGPKMLELTQQLVADPSIVGLLGFLNSAGLAEMAKQDLPVKAGIALITPLQGDKHVISAGNVFPLRSGYADEVTALLKE
AKSWDKNEVAIVNMNIAFGPPLAQLAIQQANAQGLKIATHQVIDVSPAAFDASVKAAVAAVSKSQPKAVLVLAAGKPASE
FIRAFREAPGGATQVYGLSVLLHDALVNAVGADKARGIVLSQAVPYPFIPSKAVINEYLTDMNKYAAGQPLSFSSLEGYL
GAKIAAEAVHRAGSQPTRAKVLAALTNLGEFDLGGLYVKYTPVKRQGWGGVELSIINGQGALKK

Sequences:

>Translated_384_residues
MKKISSPLLARLLLATLCSFSSAGHAAQEIVFGQVASQTNPASAANAKGLAVGIQTYFAKVNAKGGIAGNKLKLVTLDDD
LQGPKMLELTQQLVADPSIVGLLGFLNSAGLAEMAKQDLPVKAGIALITPLQGDKHVISAGNVFPLRSGYADEVTALLKE
AKSWDKNEVAIVNMNIAFGPPLAQLAIQQANAQGLKIATHQVIDVSPAAFDASVKAAVAAVSKSQPKAVLVLAAGKPASE
FIRAFREAPGGATQVYGLSVLLHDALVNAVGADKARGIVLSQAVPYPFIPSKAVINEYLTDMNKYAAGQPLSFSSLEGYL
GAKIAAEAVHRAGSQPTRAKVLAALTNLGEFDLGGLYVKYTPVKRQGWGGVELSIINGQGALKK
>Mature_384_residues
MKKISSPLLARLLLATLCSFSSAGHAAQEIVFGQVASQTNPASAANAKGLAVGIQTYFAKVNAKGGIAGNKLKLVTLDDD
LQGPKMLELTQQLVADPSIVGLLGFLNSAGLAEMAKQDLPVKAGIALITPLQGDKHVISAGNVFPLRSGYADEVTALLKE
AKSWDKNEVAIVNMNIAFGPPLAQLAIQQANAQGLKIATHQVIDVSPAAFDASVKAAVAAVSKSQPKAVLVLAAGKPASE
FIRAFREAPGGATQVYGLSVLLHDALVNAVGADKARGIVLSQAVPYPFIPSKAVINEYLTDMNKYAAGQPLSFSSLEGYL
GAKIAAEAVHRAGSQPTRAKVLAALTNLGEFDLGGLYVKYTPVKRQGWGGVELSIINGQGALKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39869; Mature: 39869

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISSPLLARLLLATLCSFSSAGHAAQEIVFGQVASQTNPASAANAKGLAVGIQTYFAK
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHE
VNAKGGIAGNKLKLVTLDDDLQGPKMLELTQQLVADPSIVGLLGFLNSAGLAEMAKQDLP
ECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCC
VKAGIALITPLQGDKHVISAGNVFPLRSGYADEVTALLKEAKSWDKNEVAIVNMNIAFGP
CCCCEEEEECCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCC
PLAQLAIQQANAQGLKIATHQVIDVSPAAFDASVKAAVAAVSKSQPKAVLVLAAGKPASE
CHHHHHHHHCCCCCEEEEEEEEEECCCHHHCHHHHHHHHHHHCCCCCEEEEEECCCCHHH
FIRAFREAPGGATQVYGLSVLLHDALVNAVGADKARGIVLSQAVPYPFIPSKAVINEYLT
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
DMNKYAAGQPLSFSSLEGYLGAKIAAEAVHRAGSQPTRAKVLAALTNLGEFDLGGLYVKY
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEE
TPVKRQGWGGVELSIINGQGALKK
ECCCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MKKISSPLLARLLLATLCSFSSAGHAAQEIVFGQVASQTNPASAANAKGLAVGIQTYFAK
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHE
VNAKGGIAGNKLKLVTLDDDLQGPKMLELTQQLVADPSIVGLLGFLNSAGLAEMAKQDLP
ECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCC
VKAGIALITPLQGDKHVISAGNVFPLRSGYADEVTALLKEAKSWDKNEVAIVNMNIAFGP
CCCCEEEEECCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCC
PLAQLAIQQANAQGLKIATHQVIDVSPAAFDASVKAAVAAVSKSQPKAVLVLAAGKPASE
CHHHHHHHHCCCCCEEEEEEEEEECCCHHHCHHHHHHHHHHHCCCCCEEEEEECCCCHHH
FIRAFREAPGGATQVYGLSVLLHDALVNAVGADKARGIVLSQAVPYPFIPSKAVINEYLT
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
DMNKYAAGQPLSFSSLEGYLGAKIAAEAVHRAGSQPTRAKVLAALTNLGEFDLGGLYVKY
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEE
TPVKRQGWGGVELSIINGQGALKK
ECCCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA