| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787499
Identifier: 91787499
GI number: 91787499
Start: 1668947
End: 1670101
Strand: Reverse
Name: 91787499
Synonym: Bpro_1617
Alternate gene names: NA
Gene position: 1670101-1668947 (Counterclockwise)
Preceding gene: 91787500
Following gene: 91787497
Centisome position: 32.12
GC content: 58.01
Gene sequence:
>1155_bases ATGAAAAAAATCTCCTCGCCTCTCCTCGCCCGGCTTCTTCTCGCCACACTCTGCAGTTTTTCCAGCGCCGGCCACGCTGC GCAGGAGATTGTTTTTGGGCAGGTTGCATCGCAAACCAACCCGGCGTCGGCAGCCAACGCCAAGGGCCTTGCCGTTGGCA TCCAGACTTACTTCGCCAAAGTCAACGCCAAAGGCGGCATCGCGGGCAACAAGCTCAAGCTGGTGACGCTTGACGATGAC CTGCAGGGCCCGAAAATGCTGGAACTGACCCAGCAGCTGGTTGCCGACCCCTCCATTGTTGGCCTGCTGGGCTTCCTCAA CAGCGCAGGGCTGGCTGAAATGGCCAAACAGGATTTGCCCGTGAAGGCGGGCATCGCGTTGATCACACCGCTTCAGGGTG ACAAGCATGTGATCAGCGCCGGAAATGTATTTCCTCTGCGCAGTGGTTACGCGGACGAAGTCACTGCCTTGCTCAAGGAA GCAAAGAGTTGGGACAAGAACGAAGTCGCGATCGTCAACATGAACATTGCTTTTGGACCGCCCCTGGCCCAACTGGCAAT CCAGCAGGCCAATGCACAAGGCCTGAAAATCGCTACCCATCAAGTGATTGATGTCAGTCCCGCAGCATTTGACGCCAGCG TTAAAGCGGCGGTTGCAGCAGTGTCGAAGTCCCAGCCGAAAGCAGTCCTGGTGCTGGCCGCCGGCAAACCCGCCTCTGAA TTCATCAGGGCCTTCCGCGAGGCACCGGGTGGCGCTACCCAGGTCTATGGGCTGTCTGTACTGTTGCACGACGCGCTGGT CAACGCCGTTGGCGCAGACAAGGCGCGGGGTATCGTGTTGAGCCAGGCGGTTCCCTACCCCTTCATTCCAAGCAAGGCCG TCATCAACGAATACCTGACGGACATGAATAAATATGCGGCAGGACAGCCACTCTCCTTCTCCAGCCTTGAGGGCTACCTG GGCGCCAAGATAGCCGCAGAAGCAGTGCACCGGGCAGGCAGTCAACCCACACGAGCGAAAGTCCTGGCGGCATTGACGAA CCTGGGTGAGTTCGATCTGGGTGGACTCTATGTCAAATACACGCCAGTCAAACGCCAGGGCTGGGGAGGCGTGGAGCTTT CAATCATCAATGGCCAGGGAGCGCTAAAAAAATAA
Upstream 100 bases:
>100_bases ACGCCAGGCCTGAACTGCTTGAGCTGTATCTGGGGGTTTGAGCATGCGAGCCTTCGCTTGCATGCTCTGGCCATTTTCCT GAATTCAAAAAAACATTGGC
Downstream 100 bases:
>100_bases CGCGCCAGGCGACAGAGCGTTTTCAGGATGCCCTTGCGGGCTGGCTGTTACTGACTCGCACCTTGTACATCACACAGAGC GATGAATGCTGGCAACCCCA
Product: extracellular ligand-binding receptor
Products: NA
Alternate protein names: Abc-Type Branched-Chain Amino Acid Transport Systems
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKKISSPLLARLLLATLCSFSSAGHAAQEIVFGQVASQTNPASAANAKGLAVGIQTYFAKVNAKGGIAGNKLKLVTLDDD LQGPKMLELTQQLVADPSIVGLLGFLNSAGLAEMAKQDLPVKAGIALITPLQGDKHVISAGNVFPLRSGYADEVTALLKE AKSWDKNEVAIVNMNIAFGPPLAQLAIQQANAQGLKIATHQVIDVSPAAFDASVKAAVAAVSKSQPKAVLVLAAGKPASE FIRAFREAPGGATQVYGLSVLLHDALVNAVGADKARGIVLSQAVPYPFIPSKAVINEYLTDMNKYAAGQPLSFSSLEGYL GAKIAAEAVHRAGSQPTRAKVLAALTNLGEFDLGGLYVKYTPVKRQGWGGVELSIINGQGALKK
Sequences:
>Translated_384_residues MKKISSPLLARLLLATLCSFSSAGHAAQEIVFGQVASQTNPASAANAKGLAVGIQTYFAKVNAKGGIAGNKLKLVTLDDD LQGPKMLELTQQLVADPSIVGLLGFLNSAGLAEMAKQDLPVKAGIALITPLQGDKHVISAGNVFPLRSGYADEVTALLKE AKSWDKNEVAIVNMNIAFGPPLAQLAIQQANAQGLKIATHQVIDVSPAAFDASVKAAVAAVSKSQPKAVLVLAAGKPASE FIRAFREAPGGATQVYGLSVLLHDALVNAVGADKARGIVLSQAVPYPFIPSKAVINEYLTDMNKYAAGQPLSFSSLEGYL GAKIAAEAVHRAGSQPTRAKVLAALTNLGEFDLGGLYVKYTPVKRQGWGGVELSIINGQGALKK >Mature_384_residues MKKISSPLLARLLLATLCSFSSAGHAAQEIVFGQVASQTNPASAANAKGLAVGIQTYFAKVNAKGGIAGNKLKLVTLDDD LQGPKMLELTQQLVADPSIVGLLGFLNSAGLAEMAKQDLPVKAGIALITPLQGDKHVISAGNVFPLRSGYADEVTALLKE AKSWDKNEVAIVNMNIAFGPPLAQLAIQQANAQGLKIATHQVIDVSPAAFDASVKAAVAAVSKSQPKAVLVLAAGKPASE FIRAFREAPGGATQVYGLSVLLHDALVNAVGADKARGIVLSQAVPYPFIPSKAVINEYLTDMNKYAAGQPLSFSSLEGYL GAKIAAEAVHRAGSQPTRAKVLAALTNLGEFDLGGLYVKYTPVKRQGWGGVELSIINGQGALKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39869; Mature: 39869
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKISSPLLARLLLATLCSFSSAGHAAQEIVFGQVASQTNPASAANAKGLAVGIQTYFAK CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHE VNAKGGIAGNKLKLVTLDDDLQGPKMLELTQQLVADPSIVGLLGFLNSAGLAEMAKQDLP ECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCC VKAGIALITPLQGDKHVISAGNVFPLRSGYADEVTALLKEAKSWDKNEVAIVNMNIAFGP CCCCEEEEECCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCC PLAQLAIQQANAQGLKIATHQVIDVSPAAFDASVKAAVAAVSKSQPKAVLVLAAGKPASE CHHHHHHHHCCCCCEEEEEEEEEECCCHHHCHHHHHHHHHHHCCCCCEEEEEECCCCHHH FIRAFREAPGGATQVYGLSVLLHDALVNAVGADKARGIVLSQAVPYPFIPSKAVINEYLT HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHH DMNKYAAGQPLSFSSLEGYLGAKIAAEAVHRAGSQPTRAKVLAALTNLGEFDLGGLYVKY HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEE TPVKRQGWGGVELSIINGQGALKK ECCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MKKISSPLLARLLLATLCSFSSAGHAAQEIVFGQVASQTNPASAANAKGLAVGIQTYFAK CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHE VNAKGGIAGNKLKLVTLDDDLQGPKMLELTQQLVADPSIVGLLGFLNSAGLAEMAKQDLP ECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCC VKAGIALITPLQGDKHVISAGNVFPLRSGYADEVTALLKEAKSWDKNEVAIVNMNIAFGP CCCCEEEEECCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCC PLAQLAIQQANAQGLKIATHQVIDVSPAAFDASVKAAVAAVSKSQPKAVLVLAAGKPASE CHHHHHHHHCCCCCEEEEEEEEEECCCHHHCHHHHHHHHHHHCCCCCEEEEEECCCCHHH FIRAFREAPGGATQVYGLSVLLHDALVNAVGADKARGIVLSQAVPYPFIPSKAVINEYLT HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHH DMNKYAAGQPLSFSSLEGYLGAKIAAEAVHRAGSQPTRAKVLAALTNLGEFDLGGLYVKY HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEE TPVKRQGWGGVELSIINGQGALKK ECCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA