| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is murB [H]
Identifier: 91787481
GI number: 91787481
Start: 1648864
End: 1649931
Strand: Direct
Name: murB [H]
Synonym: Bpro_1597
Alternate gene names: 91787481
Gene position: 1648864-1649931 (Clockwise)
Preceding gene: 91787478
Following gene: 91787482
Centisome position: 31.71
GC content: 63.3
Gene sequence:
>1068_bases GTGATGTTAGTCGAGAAAAACGTTCCGCTCCAGCATTCCAACAGCTTTGGCATTATGGCCAAGGCGCTTTCCCTCGTCCG GGTCAGTGCCGAGTCCGACATTGCCGCCGTGCTGCAGGATGATGCGTTGCGCGCCATGTCCAAGTTTGTGCTGGGCGGTG GCAGCAACATCGTGCTGACCGGTGACGTCAAACCCCTGGTGCTCAAGGTGGAGATCATGGGCAAGCGCCTGGTCGGCGAA ACCGCCAAGGCCTGGATCGTCGAGGCCGGGGCTGGCGAGAACTGGCACGATCTGGTCACCTGGACCCTGCAGATGGGCTA CCCGGGCCTGGAAAACCTGGCACTGATCCCCGGCACCGTCGGCGCATCGCCTGTGCAGAACATTGGCGCCTATGGGGTGG AGCTGCAGGACCGCTTCGAGTCGCTCGATGCCGTGGACCTGACCACCGGCCAGCGCTTTACCCTCAATGCCGCGCAGTGC GCGTTCGGCTACCGCGATTCCGTGTTCAAACACACCAGCATCGCCACCAGTGCGGGCACGCCCGGTTTCGGCTTGGCGGG CAAGGCGCTGATCACCCATGTGCGGTTTTCCCTGCCCAAGGCCTGGAAGGCCGTGCTGGGGTATGCCGATATCGAGAAAA AGATGCAGCAGGCCGGGGTCCATGCGCCGGATGCGCAGCAAATTTACGACTGGATTTGCGAAATCCGCCGGGCCAAGCTG CCCGATCCGCAGGTCATCGGCAATGCCGGCAGCTTCTTCAAGAACCCGACCGTTTCACCCGAGCAGTGCGCCGACATCAT CCAGCGCGAGCCCAAAATTGTTCACTACCCGCTGGCCGACGGCACGGTCAAGCTGGCCGCAGGCTGGCTCATCGACGCCT GCGGCTGGAAAGGCAAATCCGTAGGCAATGCCGGCGTGTACGACAGGCAGGCACTGGTGCTGGTGAACCGCGGCGGCCCC GGCAACCCGGTGACGGGCGGTGAAGTGATGACCCTGGCCAAGGCCATCCAGACCAGCGTGTACGAACGTTTTGGCATCCT GCTGGAGCCCGAGCCGGTGGTGGTCTGA
Upstream 100 bases:
>100_bases CTGGAAGTAAGAGAAAAGGACAGGTGAAAAAGGGGGGCGTAGAGGGCGGTAAAAGGGCGGGAAGAGGTGGGGCAGGGGCG GGCAGGGATGAGACAATCCC
Downstream 100 bases:
>100_bases TGGACCTTTTCCATCTGAATTTCCGCCGCCGCATCAACGCGCTCGTGTGGGCGCGGCGCGCGGTGGTGCTGGCCGCGGTG CTCGCGGTATGGGTCTGGCA
Product: UDP-N-acetylmuramate dehydrogenase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MMLVEKNVPLQHSNSFGIMAKALSLVRVSAESDIAAVLQDDALRAMSKFVLGGGSNIVLTGDVKPLVLKVEIMGKRLVGE TAKAWIVEAGAGENWHDLVTWTLQMGYPGLENLALIPGTVGASPVQNIGAYGVELQDRFESLDAVDLTTGQRFTLNAAQC AFGYRDSVFKHTSIATSAGTPGFGLAGKALITHVRFSLPKAWKAVLGYADIEKKMQQAGVHAPDAQQIYDWICEIRRAKL PDPQVIGNAGSFFKNPTVSPEQCADIIQREPKIVHYPLADGTVKLAAGWLIDACGWKGKSVGNAGVYDRQALVLVNRGGP GNPVTGGEVMTLAKAIQTSVYERFGILLEPEPVVV
Sequences:
>Translated_355_residues MMLVEKNVPLQHSNSFGIMAKALSLVRVSAESDIAAVLQDDALRAMSKFVLGGGSNIVLTGDVKPLVLKVEIMGKRLVGE TAKAWIVEAGAGENWHDLVTWTLQMGYPGLENLALIPGTVGASPVQNIGAYGVELQDRFESLDAVDLTTGQRFTLNAAQC AFGYRDSVFKHTSIATSAGTPGFGLAGKALITHVRFSLPKAWKAVLGYADIEKKMQQAGVHAPDAQQIYDWICEIRRAKL PDPQVIGNAGSFFKNPTVSPEQCADIIQREPKIVHYPLADGTVKLAAGWLIDACGWKGKSVGNAGVYDRQALVLVNRGGP GNPVTGGEVMTLAKAIQTSVYERFGILLEPEPVVV >Mature_355_residues MMLVEKNVPLQHSNSFGIMAKALSLVRVSAESDIAAVLQDDALRAMSKFVLGGGSNIVLTGDVKPLVLKVEIMGKRLVGE TAKAWIVEAGAGENWHDLVTWTLQMGYPGLENLALIPGTVGASPVQNIGAYGVELQDRFESLDAVDLTTGQRFTLNAAQC AFGYRDSVFKHTSIATSAGTPGFGLAGKALITHVRFSLPKAWKAVLGYADIEKKMQQAGVHAPDAQQIYDWICEIRRAKL PDPQVIGNAGSFFKNPTVSPEQCADIIQREPKIVHYPLADGTVKLAAGWLIDACGWKGKSVGNAGVYDRQALVLVNRGGP GNPVTGGEVMTLAKAIQTSVYERFGILLEPEPVVV
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790407, Length=345, Percent_Identity=43.4782608695652, Blast_Score=267, Evalue=7e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 37993; Mature: 37993
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLVEKNVPLQHSNSFGIMAKALSLVRVSAESDIAAVLQDDALRAMSKFVLGGGSNIVLT CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE GDVKPLVLKVEIMGKRLVGETAKAWIVEAGAGENWHDLVTWTLQMGYPGLENLALIPGTV CCCCEEEEEEEECCCHHHCCCCEEEEEECCCCCCCHHEEEEEEECCCCCCCCCEECCCCC GASPVQNIGAYGVELQDRFESLDAVDLTTGQRFTLNAAQCAFGYRDSVFKHTSIATSAGT CCCHHHHHCCCCCCHHHHHCCCCEEEECCCCEEEEEHHHHHCCCHHHHHHHHEEECCCCC PGFGLAGKALITHVRFSLPKAWKAVLGYADIEKKMQQAGVHAPDAQQIYDWICEIRRAKL CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC PDPQVIGNAGSFFKNPTVSPEQCADIIQREPKIVHYPLADGTVKLAAGWLIDACGWKGKS CCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEECEEEECCCCCCCC VGNAGVYDRQALVLVNRGGPGNPVTGGEVMTLAKAIQTSVYERFGILLEPEPVVV CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCC >Mature Secondary Structure MMLVEKNVPLQHSNSFGIMAKALSLVRVSAESDIAAVLQDDALRAMSKFVLGGGSNIVLT CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE GDVKPLVLKVEIMGKRLVGETAKAWIVEAGAGENWHDLVTWTLQMGYPGLENLALIPGTV CCCCEEEEEEEECCCHHHCCCCEEEEEECCCCCCCHHEEEEEEECCCCCCCCCEECCCCC GASPVQNIGAYGVELQDRFESLDAVDLTTGQRFTLNAAQCAFGYRDSVFKHTSIATSAGT CCCHHHHHCCCCCCHHHHHCCCCEEEECCCCEEEEEHHHHHCCCHHHHHHHHEEECCCCC PGFGLAGKALITHVRFSLPKAWKAVLGYADIEKKMQQAGVHAPDAQQIYDWICEIRRAKL CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC PDPQVIGNAGSFFKNPTVSPEQCADIIQREPKIVHYPLADGTVKLAAGWLIDACGWKGKS CCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEECEEEECCCCCCCC VGNAGVYDRQALVLVNRGGPGNPVTGGEVMTLAKAIQTSVYERFGILLEPEPVVV CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA