Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yjjJ [H]

Identifier: 91787459

GI number: 91787459

Start: 1619805

End: 1621160

Strand: Direct

Name: yjjJ [H]

Synonym: Bpro_1570

Alternate gene names: 91787459

Gene position: 1619805-1621160 (Clockwise)

Preceding gene: 91787458

Following gene: 91787460

Centisome position: 31.15

GC content: 63.27

Gene sequence:

>1356_bases
ATGACGACTTCCGAGGACCTGCTCCGAACACTACGAACTTGGCACAAGCTGCCCGCCAAGCAACTGCTTGAGCGGCTTGG
CATCAGTCGCGCGACGCTCATGCGCGCAGTTCGTGAGCTTGGCTCGCAGGTAGTTGCTCGCGGGCGGGCGCGCAGGACAG
CATACGCTGCCCGCCGTGCGCTGCGCGGCAGTTTGCAGGCGCTGCCGCTCTACCGCATTGACCAGGATGGCCAGGCCCAC
GAAGTTGCGATGCTGTATCCGGTCTATCCGGCAGGGTGTGCGCTTGACTTTCTTGAGTCGCTTGACTGGCCGTTGGATGA
AGACATGCGGGACGGCTGGTTTGAAGGCCTGCCTTACTTTCTGGACGATATGCGCCCACAAGGATTCTTGGGGCGGCACT
TTGCTCGACGTCACGCCGACTTGCTCCAAGTCAGCGCGGACCCCAAGGTTTGGTCGGAGGACGACACGCTGCATGCGCTG
ACGTTGTTAGGCAGTGACACGCCAGGCAACTACGTCCTGGGAGAGCCGGCATTGCGCCAGTGGCTGGCCCATTCTCAACA
GAACGCACTTCCCCTGGAATCGAGCCAAGTTGTGCCTGCCTACCTGCTCAAGGCCGAAGAGGCTATGACTCACGGGACTG
CGGGCTCCTCGGCAGGAGGAGAGTTCCCGAAGTTCACCGCGTTTCGCGAGGTGGCGGGCAAGCCGATCCACGTCATCGTC
AAGTTTTCGGGCTCCGATGAGGCGCCCGGAACTGTGCGCTGGTCTGACCTGCTGGTCTGCGAACACTTGGCCCTGTGCGC
CGTCGCCGAGCACCTGGGTCTTGAGGCCGCGGTCAGCCGCATCCATCAGGCGGGCGGGCGAACTTTCCTGGAGGTGGAGC
GGTTTGACCGCCATGGCAGGCTCGGGCGCTCGCCCGTCTGCTCTTGGTCAGCCTTGAACGCAGCTCTGTTTGGGTTTGCC
GGCAAGCCTTGGCCGGAGGGCGGCGCCGCCCTGCTCAGGCAAGGGCTCATCGACACCGAATGCCTGGTCGCCCTGCAACG
ACTTTGGTTGTTCGGGCAGCTCATTGCCAACACAGACATGCACGACGGCAACCTGTCGTTCAGGCCCGGGCTTCAACCGG
CCCCGGTATATGACATGCTGCCCATGGGGTACGCCCCGGTGCGCGGCGTGGAGCTGCCGGTAAAGGAGTTTGTGCCCCCT
CTGCCCCTGCCCGCCGAGAAAGACGCCTGGCTGACGGCTGCCCATGCGGCGGAGCACTTCTGGACAGCAGCAAGCGGCGA
CGCGCGAATCAGCAAGAACTTCAGAGCAATTTGTAGCCAAAACGCGAGCAAGGTTCGCAAGGCCTTGTACGGCTGA

Upstream 100 bases:

>100_bases
GTTTTAATTTATCGTTTCAATAATCGTTTCCAATTACAATGACTATTGGCGAAATTATCATTCACAAAAATTTTCGTTTA
ATCTACTTGTAAATCGTTTC

Downstream 100 bases:

>100_bases
GTCCAGGTCGCAAGAATTACGCACGACCGATGGTGGCCGTGCGCGAATCCCCACCAATGATGGGAGAGGACCGCATGGAG
AGCGTTGCCGGCGAGATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MTTSEDLLRTLRTWHKLPAKQLLERLGISRATLMRAVRELGSQVVARGRARRTAYAARRALRGSLQALPLYRIDQDGQAH
EVAMLYPVYPAGCALDFLESLDWPLDEDMRDGWFEGLPYFLDDMRPQGFLGRHFARRHADLLQVSADPKVWSEDDTLHAL
TLLGSDTPGNYVLGEPALRQWLAHSQQNALPLESSQVVPAYLLKAEEAMTHGTAGSSAGGEFPKFTAFREVAGKPIHVIV
KFSGSDEAPGTVRWSDLLVCEHLALCAVAEHLGLEAAVSRIHQAGGRTFLEVERFDRHGRLGRSPVCSWSALNAALFGFA
GKPWPEGGAALLRQGLIDTECLVALQRLWLFGQLIANTDMHDGNLSFRPGLQPAPVYDMLPMGYAPVRGVELPVKEFVPP
LPLPAEKDAWLTAAHAAEHFWTAASGDARISKNFRAICSQNASKVRKALYG

Sequences:

>Translated_451_residues
MTTSEDLLRTLRTWHKLPAKQLLERLGISRATLMRAVRELGSQVVARGRARRTAYAARRALRGSLQALPLYRIDQDGQAH
EVAMLYPVYPAGCALDFLESLDWPLDEDMRDGWFEGLPYFLDDMRPQGFLGRHFARRHADLLQVSADPKVWSEDDTLHAL
TLLGSDTPGNYVLGEPALRQWLAHSQQNALPLESSQVVPAYLLKAEEAMTHGTAGSSAGGEFPKFTAFREVAGKPIHVIV
KFSGSDEAPGTVRWSDLLVCEHLALCAVAEHLGLEAAVSRIHQAGGRTFLEVERFDRHGRLGRSPVCSWSALNAALFGFA
GKPWPEGGAALLRQGLIDTECLVALQRLWLFGQLIANTDMHDGNLSFRPGLQPAPVYDMLPMGYAPVRGVELPVKEFVPP
LPLPAEKDAWLTAAHAAEHFWTAASGDARISKNFRAICSQNASKVRKALYG
>Mature_450_residues
TTSEDLLRTLRTWHKLPAKQLLERLGISRATLMRAVRELGSQVVARGRARRTAYAARRALRGSLQALPLYRIDQDGQAHE
VAMLYPVYPAGCALDFLESLDWPLDEDMRDGWFEGLPYFLDDMRPQGFLGRHFARRHADLLQVSADPKVWSEDDTLHALT
LLGSDTPGNYVLGEPALRQWLAHSQQNALPLESSQVVPAYLLKAEEAMTHGTAGSSAGGEFPKFTAFREVAGKPIHVIVK
FSGSDEAPGTVRWSDLLVCEHLALCAVAEHLGLEAAVSRIHQAGGRTFLEVERFDRHGRLGRSPVCSWSALNAALFGFAG
KPWPEGGAALLRQGLIDTECLVALQRLWLFGQLIANTDMHDGNLSFRPGLQPAPVYDMLPMGYAPVRGVELPVKEFVPPL
PLPAEKDAWLTAAHAAEHFWTAASGDARISKNFRAICSQNASKVRKALYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790845, Length=434, Percent_Identity=37.3271889400922, Blast_Score=265, Evalue=5e-72,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012893
- InterPro:   IPR012894 [H]

Pfam domain/function: PF07804 HipA_C; PF07805 HipA_N [H]

EC number: NA

Molecular weight: Translated: 49697; Mature: 49566

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSEDLLRTLRTWHKLPAKQLLERLGISRATLMRAVRELGSQVVARGRARRTAYAARRA
CCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRGSLQALPLYRIDQDGQAHEVAMLYPVYPAGCALDFLESLDWPLDEDMRDGWFEGLPYF
HHHHHHHCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCHHH
LDDMRPQGFLGRHFARRHADLLQVSADPKVWSEDDTLHALTLLGSDTPGNYVLGEPALRQ
HHCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEECCCCCCCEEECCHHHHH
WLAHSQQNALPLESSQVVPAYLLKAEEAMTHGTAGSSAGGEFPKFTAFREVAGKPIHVIV
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE
KFSGSDEAPGTVRWSDLLVCEHLALCAVAEHLGLEAAVSRIHQAGGRTFLEVERFDRHGR
EECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEHHHHHHCCC
LGRSPVCSWSALNAALFGFAGKPWPEGGAALLRQGLIDTECLVALQRLWLFGQLIANTDM
CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
HDGNLSFRPGLQPAPVYDMLPMGYAPVRGVELPVKEFVPPLPLPAEKDAWLTAAHAAEHF
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHH
WTAASGDARISKNFRAICSQNASKVRKALYG
HCCCCCCHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
TTSEDLLRTLRTWHKLPAKQLLERLGISRATLMRAVRELGSQVVARGRARRTAYAARRA
CCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRGSLQALPLYRIDQDGQAHEVAMLYPVYPAGCALDFLESLDWPLDEDMRDGWFEGLPYF
HHHHHHHCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCHHH
LDDMRPQGFLGRHFARRHADLLQVSADPKVWSEDDTLHALTLLGSDTPGNYVLGEPALRQ
HHCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEECCCCCCCEEECCHHHHH
WLAHSQQNALPLESSQVVPAYLLKAEEAMTHGTAGSSAGGEFPKFTAFREVAGKPIHVIV
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE
KFSGSDEAPGTVRWSDLLVCEHLALCAVAEHLGLEAAVSRIHQAGGRTFLEVERFDRHGR
EECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEHHHHHHCCC
LGRSPVCSWSALNAALFGFAGKPWPEGGAALLRQGLIDTECLVALQRLWLFGQLIANTDM
CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
HDGNLSFRPGLQPAPVYDMLPMGYAPVRGVELPVKEFVPPLPLPAEKDAWLTAAHAAEHF
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHH
WTAASGDARISKNFRAICSQNASKVRKALYG
HCCCCCCHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 3299264 [H]