| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787457
Identifier: 91787457
GI number: 91787457
Start: 1618450
End: 1619460
Strand: Direct
Name: 91787457
Synonym: Bpro_1568
Alternate gene names: NA
Gene position: 1618450-1619460 (Clockwise)
Preceding gene: 91787456
Following gene: 91787458
Centisome position: 31.12
GC content: 61.72
Gene sequence:
>1011_bases ATGGACTATCTACCGCTTTCAGACAACGCAGCCCGACAAGTCATCGACGCCTCCACCATCTTCGAGGAGTGGCGCCGCGT TGAGAGGGCGGCGCGGGCCTACGTCGGCGGCATGTACTGGAAGCGGCAGGGGGAATATGAGTACCTCGTCAAAACCCTGC CCGACAACCGTCAAAAGCGCATCGACCCACGCTCCGCCAAGACGGAGGCGATTTTCAAGGATTTCACCGAGCGCAAGACC GAGATAGAGGCGCGACTGAAGTCACTGCAAGGCGCCCTGAAGGAGGCCGAGCGATTGAACAAGGCGCTGAAGGCGGGTCG TGTGCCGTCCAAAGTCGTTGCCGTATTGCAGGCTCTTGAGGGTGCGGGTCTGGGTGAACATCTCAGGGTGGTTGGTACCC ACGCTCTGTACGCCTATGAGACGGCTGCTGGCGTTCGCATCGTGCAGGGAGCGCTGGCAACGCAGGATGTCGACCTGCTT TGGGATGCCGGGCGGCGCGTGAGCTTTGTCACCACCATGGACAAGCTCGACAAGTCGATGCTCGAGGTGCTGCAAAAGGC CGAACCGAGCTTTCGGCGCAAAGAGGGGCAGACCGAAACAGCGATTGATGATAAGGGGTTCGAGGTGGACTTCCTGCGCC GCCAGGTCGCAGAGGGTGACCCCCACCCGTTTCGTTTCACGGACGACGAGGAGGACTTGTGGCCCGTGCAAGCCGAGCGC GCTGCGGTGCTGACAAGTACGCCCCTGTTTGAGCATCTGGTCATCTCCGCGACGGGGCGCATGGCGCTTATGCGAACCAT TGACCCCGCTGTGTTCGTGAGCTTCAAACGCTGGATGGCTGACAACGCGCAGAAAAGGCCAGAGCTAAAGCGGCGACGCG ATGTGCGCCAGGCCGATATCGTGGAAGCGCTCTTGAAGGAGGGTCTGCTGCAGACGCAAGTCCCGACCACTGCCCCGGCG CCAGAGCCGGAGCAGGTGCCCAACGAGTCGGGTACAAGTCCAGCGCCATGA
Upstream 100 bases:
>100_bases TTACGTCGTTGGTGACGTATCGATGGTGTAAAAATTCATATAACTTGTTGATTTTATTGAATTGGCCGTACAAAATACAA AAATAATATTTATACGGCCA
Downstream 100 bases:
>100_bases GGCTTAGTGGCGTGCTGGTGTGCACCGCAGGTGGACACCCTTCAAGGCAAAGGCGATGGAGAGGTCAGGCGGGCGGCCGC TGGTTGTCATTGTCTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MDYLPLSDNAARQVIDASTIFEEWRRVERAARAYVGGMYWKRQGEYEYLVKTLPDNRQKRIDPRSAKTEAIFKDFTERKT EIEARLKSLQGALKEAERLNKALKAGRVPSKVVAVLQALEGAGLGEHLRVVGTHALYAYETAAGVRIVQGALATQDVDLL WDAGRRVSFVTTMDKLDKSMLEVLQKAEPSFRRKEGQTETAIDDKGFEVDFLRRQVAEGDPHPFRFTDDEEDLWPVQAER AAVLTSTPLFEHLVISATGRMALMRTIDPAVFVSFKRWMADNAQKRPELKRRRDVRQADIVEALLKEGLLQTQVPTTAPA PEPEQVPNESGTSPAP
Sequences:
>Translated_336_residues MDYLPLSDNAARQVIDASTIFEEWRRVERAARAYVGGMYWKRQGEYEYLVKTLPDNRQKRIDPRSAKTEAIFKDFTERKT EIEARLKSLQGALKEAERLNKALKAGRVPSKVVAVLQALEGAGLGEHLRVVGTHALYAYETAAGVRIVQGALATQDVDLL WDAGRRVSFVTTMDKLDKSMLEVLQKAEPSFRRKEGQTETAIDDKGFEVDFLRRQVAEGDPHPFRFTDDEEDLWPVQAER AAVLTSTPLFEHLVISATGRMALMRTIDPAVFVSFKRWMADNAQKRPELKRRRDVRQADIVEALLKEGLLQTQVPTTAPA PEPEQVPNESGTSPAP >Mature_336_residues MDYLPLSDNAARQVIDASTIFEEWRRVERAARAYVGGMYWKRQGEYEYLVKTLPDNRQKRIDPRSAKTEAIFKDFTERKT EIEARLKSLQGALKEAERLNKALKAGRVPSKVVAVLQALEGAGLGEHLRVVGTHALYAYETAAGVRIVQGALATQDVDLL WDAGRRVSFVTTMDKLDKSMLEVLQKAEPSFRRKEGQTETAIDDKGFEVDFLRRQVAEGDPHPFRFTDDEEDLWPVQAER AAVLTSTPLFEHLVISATGRMALMRTIDPAVFVSFKRWMADNAQKRPELKRRRDVRQADIVEALLKEGLLQTQVPTTAPA PEPEQVPNESGTSPAP
Specific function: Unknown
COG id: COG5397
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37875; Mature: 37875
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYLPLSDNAARQVIDASTIFEEWRRVERAARAYVGGMYWKRQGEYEYLVKTLPDNRQKR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHC IDPRSAKTEAIFKDFTERKTEIEARLKSLQGALKEAERLNKALKAGRVPSKVVAVLQALE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GAGLGEHLRVVGTHALYAYETAAGVRIVQGALATQDVDLLWDAGRRVSFVTTMDKLDKSM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEHHHHHHHHHHHH LEVLQKAEPSFRRKEGQTETAIDDKGFEVDFLRRQVAEGDPHPFRFTDDEEDLWPVQAER HHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH AAVLTSTPLFEHLVISATGRMALMRTIDPAVFVSFKRWMADNAQKRPELKRRRDVRQADI HHHHHCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VEALLKEGLLQTQVPTTAPAPEPEQVPNESGTSPAP HHHHHHCCHHHCCCCCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure MDYLPLSDNAARQVIDASTIFEEWRRVERAARAYVGGMYWKRQGEYEYLVKTLPDNRQKR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHC IDPRSAKTEAIFKDFTERKTEIEARLKSLQGALKEAERLNKALKAGRVPSKVVAVLQALE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GAGLGEHLRVVGTHALYAYETAAGVRIVQGALATQDVDLLWDAGRRVSFVTTMDKLDKSM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEHHHHHHHHHHHH LEVLQKAEPSFRRKEGQTETAIDDKGFEVDFLRRQVAEGDPHPFRFTDDEEDLWPVQAER HHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH AAVLTSTPLFEHLVISATGRMALMRTIDPAVFVSFKRWMADNAQKRPELKRRRDVRQADI HHHHHCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VEALLKEGLLQTQVPTTAPAPEPEQVPNESGTSPAP HHHHHHCCHHHCCCCCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA