Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787450

Identifier: 91787450

GI number: 91787450

Start: 1611467

End: 1612105

Strand: Direct

Name: 91787450

Synonym: Bpro_1560

Alternate gene names: NA

Gene position: 1611467-1612105 (Clockwise)

Preceding gene: 91787449

Following gene: 91787452

Centisome position: 30.99

GC content: 58.22

Gene sequence:

>639_bases
ATGCAAAAAAACGAAGAGCAGTTCTGGGCAAACTTGCTGGTGGGCAGCAATCCGGGATGGTCGGTGAGGATGCCCGAAAG
TTGGGGTGAGGGCGGTGCAGCCCTTGCACATCTATCGGCCAAAATCTACGCCTTCGACATCAGCACCGGCTGGAGTGGAA
CCTGTGCGCTCACCCCTGACGACTTGATTCGGGCGGCGGACATTCTGGAAGGGTCCCATATCAGGCGGAATGCGGCTGTC
AGCTACGCTCATCGCGAACTGCTGCGTGCAGCTGATGGTAAGGCCACCGCCAGCGCGGATGCAACTCGTCGCGCCATGGT
GCTGAACATGTATTACATTGCCCAGTCCCAAACACTGAAGGTGGTTCGTACGCGTTATGGCTCCGTGCGCGGGCACTGGC
TGTGCTTGCTCTACCGCTTCAAGCAGGGACAGAGCATTATTCGACCTGCCTTTCGACGCAATGTTATCGGCCGCGAGTCC
ATGTCACGGGAAATGCTTGCCCGGTGGGCCAGCGAAGTGATGCACGAAGACCAGAACGCCCAGGACTCTGGGCTGCTGCG
CCAGCTGCGCGCAGGCAATCCACTGCTGCTTAGAAATCACTCTTTGGTAGCCTTGCCAGAAAACTGGCGTTCGAAGTGA

Upstream 100 bases:

>100_bases
GGCCGCATCCAGTACGACGCTGATCTGGACATGCACCCTGGCGCCGGTATTTCCGGTCAAATCATCGGCCCCGAGACCAA
CCTGTAATCCCAGGGACTGC

Downstream 100 bases:

>100_bases
GTGCTTGGCCAATCAAGCACCGACCGACCAGCGGCGGCTCATCTTTGGACCCTGTGCCGCTTTGACCTATGGCACCGGTT
TCGTGCGCATCTACTTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MQKNEEQFWANLLVGSNPGWSVRMPESWGEGGAALAHLSAKIYAFDISTGWSGTCALTPDDLIRAADILEGSHIRRNAAV
SYAHRELLRAADGKATASADATRRAMVLNMYYIAQSQTLKVVRTRYGSVRGHWLCLLYRFKQGQSIIRPAFRRNVIGRES
MSREMLARWASEVMHEDQNAQDSGLLRQLRAGNPLLLRNHSLVALPENWRSK

Sequences:

>Translated_212_residues
MQKNEEQFWANLLVGSNPGWSVRMPESWGEGGAALAHLSAKIYAFDISTGWSGTCALTPDDLIRAADILEGSHIRRNAAV
SYAHRELLRAADGKATASADATRRAMVLNMYYIAQSQTLKVVRTRYGSVRGHWLCLLYRFKQGQSIIRPAFRRNVIGRES
MSREMLARWASEVMHEDQNAQDSGLLRQLRAGNPLLLRNHSLVALPENWRSK
>Mature_212_residues
MQKNEEQFWANLLVGSNPGWSVRMPESWGEGGAALAHLSAKIYAFDISTGWSGTCALTPDDLIRAADILEGSHIRRNAAV
SYAHRELLRAADGKATASADATRRAMVLNMYYIAQSQTLKVVRTRYGSVRGHWLCLLYRFKQGQSIIRPAFRRNVIGRES
MSREMLARWASEVMHEDQNAQDSGLLRQLRAGNPLLLRNHSLVALPENWRSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23852; Mature: 23852

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNEEQFWANLLVGSNPGWSVRMPESWGEGGAALAHLSAKIYAFDISTGWSGTCALTPD
CCCCHHHHHHHHEECCCCCCEEECCCCCCCCCHHHHEEEEEEEEEEECCCCCCEEEECHH
DLIRAADILEGSHIRRNAAVSYAHRELLRAADGKATASADATRRAMVLNMYYIAQSQTLK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEHHHHHCCHHHH
VVRTRYGSVRGHWLCLLYRFKQGQSIIRPAFRRNVIGRESMSREMLARWASEVMHEDQNA
HHHHHHCCCCHHHHHEEEHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
QDSGLLRQLRAGNPLLLRNHSLVALPENWRSK
CHHHHHHHHHCCCCEEEECCCEEEECCCCCCC
>Mature Secondary Structure
MQKNEEQFWANLLVGSNPGWSVRMPESWGEGGAALAHLSAKIYAFDISTGWSGTCALTPD
CCCCHHHHHHHHEECCCCCCEEECCCCCCCCCHHHHEEEEEEEEEEECCCCCCEEEECHH
DLIRAADILEGSHIRRNAAVSYAHRELLRAADGKATASADATRRAMVLNMYYIAQSQTLK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEHHHHHCCHHHH
VVRTRYGSVRGHWLCLLYRFKQGQSIIRPAFRRNVIGRESMSREMLARWASEVMHEDQNA
HHHHHHCCCCHHHHHEEEHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
QDSGLLRQLRAGNPLLLRNHSLVALPENWRSK
CHHHHHHHHHCCCCEEEECCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA