Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787443

Identifier: 91787443

GI number: 91787443

Start: 1605461

End: 1606924

Strand: Direct

Name: 91787443

Synonym: Bpro_1553

Alternate gene names: NA

Gene position: 1605461-1606924 (Clockwise)

Preceding gene: 91787439

Following gene: 91787444

Centisome position: 30.87

GC content: 62.09

Gene sequence:

>1464_bases
ATGACCAAACAAGACCAAACCGCTCTCCACGGCAGCAAAGAACTCAGCGCACGGGAAGTCAACCGCCTGATCTCGTCAGA
ACTCAGAAGCGCCAAGCGCATCGCCCAAGCCAAACGAGCAGGCTCCGGCACGGGCGTGAGTGTCCTGCAGCGCGTCCAGC
AACGCTACAAAAGGAACCCCAAGGCGCAAATGGCCATGTTCTTCGGCGAATTCACCCTGCGCGCCGGAACCGGCAGAGCA
CGCCCCGTATCAGAACGCACCCGCACCGTCTACGCTGACGAGCTCATCCGCATGCTCGATGAACTCAGTGAACTTCGCGC
AGGCGTGCAGGAAATAGGCGAAATCGGCAAAAGCCATGCCGTCAAACTCATCAAACACTGGGGCGCGCGCGGCCAGGCCG
CCTCCACCATCCAGAACAAGATCAGCATCCTGCGCCGCTTCCTCACGTTCATCGGAAAAGACAGCGCCATCCCCAAGGGA
GAGGACTTGAAGACCTGGCTCAACCGCCAGGGTGTCACCGCACCTATTACCCGCCAGAACATCCCCACCGAGAGCAAGGC
ATGGGATGAGAACCAGGTTGACCTGCACAAGGTGCTGGCCGAGCTGAGCAAGGAAAGCGCCATCACCGCCATCCAACTGG
AGGTACAGGCGGCATTCGGCCTGCGCATGAAGGAATCCATCCAGCTCAATCCCCAGGCGGCAGACTGCGGCACCTTCCTG
CGCGTCCTACACGGCACCAAAGGCGGCTTGCCACGCGACGTGGACTTTGACGAGGACCCTGCCATGCGCGAGTGGCAGAG
AGATGTACTTGAACGGGCAAAACTCCACGCCCAGCAAAATCGCAAGGGAACCCTGTCCATCCAGGGCAAACGCCTGGATC
AGAGCAAGGCCCACTTCTATTACCAGTGCCGCAAAATCGGCATCACCCGCGACCAGCTCGGCGTCACCGCCCATGGCCTG
CGCCACCAGTACGCCGCCCGCCGCTATGCCCGACTGGCAGGCATGGCCGCGCCAGTGACCAGGAACGCCCCTCTGCACGT
CACCGACGAGGTGCGCAGCGCCGATCTGGCCGCCCGGGAACAGGTCAGCCGTGAACTCGGCCACTTCCGCCCCGACATCA
CTCAGGCCTACACCGGCTCCCTGCCCATGATGGAAAAGGGCCGCAAACAGCGCATCCGTGACTGGGTCGAACGCACAGAG
GAGAACCCTGAGTTCCAGGCTGTCATGAAAGACGCCGGCGTTGTCTCCGTCTGGATGGGGGGACGCTTTGCCATGGGTCT
GCCAGTCGAAGCCAGCGAGAAATTCCGGCTCATCGTCCAGACAGCCAGCCGCCAGCCCCTGGATGGGGATGCCCGCTCCA
TGCTCAAACAGCGCCTCATGGGCATGTACGACCGTGCCATCGACCTCAGCGAGCACTTTGAAGCCGGCCAGCCCGATGAC
GCATTGGAACTCATGGTCCGCTGA

Upstream 100 bases:

>100_bases
AGGCATGTCACGGCCAGCACTGGACCAACAGACACCTACTTGATGGGCTCCGTGACTTCCATTTCAAACCAGTAAGTACA
TCCAAACCGAAAGCGTAGAT

Downstream 100 bases:

>100_bases
GTCAGAACGGCACCACAGCCCCACACCCCGGATAACTCAGAGCCTCAGCCCACCCTCAGAAAGGAAAACACTATGTCAGC
AAGCAGTACGCCCGACCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Fis Family Transcriptional Regulator; Poisomerase/Recombinase/Integrase; DNA Breaking-Rejoining Protein; Tyrosine Recombinase; Phage Integrase Family Protein; Phage Integrase N-Terminal SAM-Like; Regulatory Protein; Integrase Protein; Phage Integrase N-Terminal SAM-Like Protein; Transcriptional Regulator Fis Family

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MTKQDQTALHGSKELSAREVNRLISSELRSAKRIAQAKRAGSGTGVSVLQRVQQRYKRNPKAQMAMFFGEFTLRAGTGRA
RPVSERTRTVYADELIRMLDELSELRAGVQEIGEIGKSHAVKLIKHWGARGQAASTIQNKISILRRFLTFIGKDSAIPKG
EDLKTWLNRQGVTAPITRQNIPTESKAWDENQVDLHKVLAELSKESAITAIQLEVQAAFGLRMKESIQLNPQAADCGTFL
RVLHGTKGGLPRDVDFDEDPAMREWQRDVLERAKLHAQQNRKGTLSIQGKRLDQSKAHFYYQCRKIGITRDQLGVTAHGL
RHQYAARRYARLAGMAAPVTRNAPLHVTDEVRSADLAAREQVSRELGHFRPDITQAYTGSLPMMEKGRKQRIRDWVERTE
ENPEFQAVMKDAGVVSVWMGGRFAMGLPVEASEKFRLIVQTASRQPLDGDARSMLKQRLMGMYDRAIDLSEHFEAGQPDD
ALELMVR

Sequences:

>Translated_487_residues
MTKQDQTALHGSKELSAREVNRLISSELRSAKRIAQAKRAGSGTGVSVLQRVQQRYKRNPKAQMAMFFGEFTLRAGTGRA
RPVSERTRTVYADELIRMLDELSELRAGVQEIGEIGKSHAVKLIKHWGARGQAASTIQNKISILRRFLTFIGKDSAIPKG
EDLKTWLNRQGVTAPITRQNIPTESKAWDENQVDLHKVLAELSKESAITAIQLEVQAAFGLRMKESIQLNPQAADCGTFL
RVLHGTKGGLPRDVDFDEDPAMREWQRDVLERAKLHAQQNRKGTLSIQGKRLDQSKAHFYYQCRKIGITRDQLGVTAHGL
RHQYAARRYARLAGMAAPVTRNAPLHVTDEVRSADLAAREQVSRELGHFRPDITQAYTGSLPMMEKGRKQRIRDWVERTE
ENPEFQAVMKDAGVVSVWMGGRFAMGLPVEASEKFRLIVQTASRQPLDGDARSMLKQRLMGMYDRAIDLSEHFEAGQPDD
ALELMVR
>Mature_486_residues
TKQDQTALHGSKELSAREVNRLISSELRSAKRIAQAKRAGSGTGVSVLQRVQQRYKRNPKAQMAMFFGEFTLRAGTGRAR
PVSERTRTVYADELIRMLDELSELRAGVQEIGEIGKSHAVKLIKHWGARGQAASTIQNKISILRRFLTFIGKDSAIPKGE
DLKTWLNRQGVTAPITRQNIPTESKAWDENQVDLHKVLAELSKESAITAIQLEVQAAFGLRMKESIQLNPQAADCGTFLR
VLHGTKGGLPRDVDFDEDPAMREWQRDVLERAKLHAQQNRKGTLSIQGKRLDQSKAHFYYQCRKIGITRDQLGVTAHGLR
HQYAARRYARLAGMAAPVTRNAPLHVTDEVRSADLAAREQVSRELGHFRPDITQAYTGSLPMMEKGRKQRIRDWVERTEE
NPEFQAVMKDAGVVSVWMGGRFAMGLPVEASEKFRLIVQTASRQPLDGDARSMLKQRLMGMYDRAIDLSEHFEAGQPDDA
LELMVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54830; Mature: 54698

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQDQTALHGSKELSAREVNRLISSELRSAKRIAQAKRAGSGTGVSVLQRVQQRYKRNP
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
KAQMAMFFGEFTLRAGTGRARPVSERTRTVYADELIRMLDELSELRAGVQEIGEIGKSHA
HHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKLIKHWGARGQAASTIQNKISILRRFLTFIGKDSAIPKGEDLKTWLNRQGVTAPITRQN
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
IPTESKAWDENQVDLHKVLAELSKESAITAIQLEVQAAFGLRMKESIQLNPQAADCGTFL
CCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEHHHHCCCHHHCCCCCCCHHHHHHHH
RVLHGTKGGLPRDVDFDEDPAMREWQRDVLERAKLHAQQNRKGTLSIQGKRLDQSKAHFY
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH
YQCRKIGITRDQLGVTAHGLRHQYAARRYARLAGMAAPVTRNAPLHVTDEVRSADLAARE
HHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHH
QVSRELGHFRPDITQAYTGSLPMMEKGRKQRIRDWVERTEENPEFQAVMKDAGVVSVWMG
HHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEC
GRFAMGLPVEASEKFRLIVQTASRQPLDGDARSMLKQRLMGMYDRAIDLSEHFEAGQPDD
CEEEECCCCCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCH
ALELMVR
HHHHHCC
>Mature Secondary Structure 
TKQDQTALHGSKELSAREVNRLISSELRSAKRIAQAKRAGSGTGVSVLQRVQQRYKRNP
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
KAQMAMFFGEFTLRAGTGRARPVSERTRTVYADELIRMLDELSELRAGVQEIGEIGKSHA
HHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKLIKHWGARGQAASTIQNKISILRRFLTFIGKDSAIPKGEDLKTWLNRQGVTAPITRQN
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
IPTESKAWDENQVDLHKVLAELSKESAITAIQLEVQAAFGLRMKESIQLNPQAADCGTFL
CCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEHHHHCCCHHHCCCCCCCHHHHHHHH
RVLHGTKGGLPRDVDFDEDPAMREWQRDVLERAKLHAQQNRKGTLSIQGKRLDQSKAHFY
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH
YQCRKIGITRDQLGVTAHGLRHQYAARRYARLAGMAAPVTRNAPLHVTDEVRSADLAARE
HHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHH
QVSRELGHFRPDITQAYTGSLPMMEKGRKQRIRDWVERTEENPEFQAVMKDAGVVSVWMG
HHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEC
GRFAMGLPVEASEKFRLIVQTASRQPLDGDARSMLKQRLMGMYDRAIDLSEHFEAGQPDD
CEEEECCCCCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCH
ALELMVR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA