| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787436
Identifier: 91787436
GI number: 91787436
Start: 1596845
End: 1597678
Strand: Direct
Name: 91787436
Synonym: Bpro_1546
Alternate gene names: NA
Gene position: 1596845-1597678 (Clockwise)
Preceding gene: 91787435
Following gene: 91787438
Centisome position: 30.71
GC content: 54.56
Gene sequence:
>834_bases ATGGCAGGTCTGGATTTATCCAGGATTGATACGGATCTGTCGGTCTACATCCAAAAGGTCAAGGCCAAGCTGAAAACCGA GGAAATGGACGAAGGTGAGTCCGGCTACACGTTAACCAAACGGGATGGGACGTCAACCATCATCGTGAATGAGTTGGAAC GGCGTGAGCGCCAGAGATTCTCCGCTTGCCATGAGATCGGGCATATCGTGCTTGAACTGAGCTCCAATCACAAGGAGACT CCGGCTTGGTCTTACGCTAAACGTGAAGACAACGAAATTGCCTGCGACATGTTCGCGGCTGAGCTGCTAATGCCGTATGA CCAATTCAAAGCCGATGTGGATAAGGCGGAGCCTTCTTTTGAGTTGGTTGAGCGCCTTCGTGCCAAGTATGTAACTTCGT TTTCCGCCACGGCCTCACGGGTCGCCGCCGTCACGGACTACCCCTGTGCTTTTGTCACGATGAACTCCAGTGTCATTCGC CACGCATCGCGCTCTGCAGCGCTGCGCACGCTGAATGCCTGGATAGCGCCGAAATCGCCCATCCCCGACGGCTCCGTGGC CCGTCAGCTGGTGAAGGATGGTCAGCGTTCAGGCGAATCTCCAGATGTTTCCCAAGACGTATGGTTCCAAGACTGGCCTC AAGGTTATGACCTTACCGAGCTGGCCAAGCACTATTCCCAATATGACGAAACCTTCGCACTGCTTTGGTTTGAGGGCGAT AGTGGTCCAGAAGAGCCGGTCAATACGTTCTCGGGAAAGCCGCAAGAGGATGATGGTGGGCTCAAGGAACTGGATGGGGT CTTACAGTTCTCGAAGCGGACGAAGCGCAGGTAG
Upstream 100 bases:
>100_bases GCGCGCCCCGACCTGGAAACCATCGAAACCCGCGTACGCAAAGCGTTCGAAGACTGACGTGATCAACGAACTGGATATCC GAAACAAAGCGCGCCAATTT
Downstream 100 bases:
>100_bases CACCAAGGTAGGCTCGACACAGGCGCCGCGAGCTTGACCTGCAGCCGAACAATGCCAGGCACAGTCTGGATGGGGTGTCA ATCGCTGTCCCTACAGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MAGLDLSRIDTDLSVYIQKVKAKLKTEEMDEGESGYTLTKRDGTSTIIVNELERRERQRFSACHEIGHIVLELSSNHKET PAWSYAKREDNEIACDMFAAELLMPYDQFKADVDKAEPSFELVERLRAKYVTSFSATASRVAAVTDYPCAFVTMNSSVIR HASRSAALRTLNAWIAPKSPIPDGSVARQLVKDGQRSGESPDVSQDVWFQDWPQGYDLTELAKHYSQYDETFALLWFEGD SGPEEPVNTFSGKPQEDDGGLKELDGVLQFSKRTKRR
Sequences:
>Translated_277_residues MAGLDLSRIDTDLSVYIQKVKAKLKTEEMDEGESGYTLTKRDGTSTIIVNELERRERQRFSACHEIGHIVLELSSNHKET PAWSYAKREDNEIACDMFAAELLMPYDQFKADVDKAEPSFELVERLRAKYVTSFSATASRVAAVTDYPCAFVTMNSSVIR HASRSAALRTLNAWIAPKSPIPDGSVARQLVKDGQRSGESPDVSQDVWFQDWPQGYDLTELAKHYSQYDETFALLWFEGD SGPEEPVNTFSGKPQEDDGGLKELDGVLQFSKRTKRR >Mature_276_residues AGLDLSRIDTDLSVYIQKVKAKLKTEEMDEGESGYTLTKRDGTSTIIVNELERRERQRFSACHEIGHIVLELSSNHKETP AWSYAKREDNEIACDMFAAELLMPYDQFKADVDKAEPSFELVERLRAKYVTSFSATASRVAAVTDYPCAFVTMNSSVIRH ASRSAALRTLNAWIAPKSPIPDGSVARQLVKDGQRSGESPDVSQDVWFQDWPQGYDLTELAKHYSQYDETFALLWFEGDS GPEEPVNTFSGKPQEDDGGLKELDGVLQFSKRTKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31231; Mature: 31100
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLDLSRIDTDLSVYIQKVKAKLKTEEMDEGESGYTLTKRDGTSTIIVNELERRERQRF CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHH SACHEIGHIVLELSSNHKETPAWSYAKREDNEIACDMFAAELLMPYDQFKADVDKAEPSF HHHHHHHHEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCH ELVERLRAKYVTSFSATASRVAAVTDYPCAFVTMNSSVIRHASRSAALRTLNAWIAPKSP HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCC IPDGSVARQLVKDGQRSGESPDVSQDVWFQDWPQGYDLTELAKHYSQYDETFALLWFEGD CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECC SGPEEPVNTFSGKPQEDDGGLKELDGVLQFSKRTKRR CCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGLDLSRIDTDLSVYIQKVKAKLKTEEMDEGESGYTLTKRDGTSTIIVNELERRERQRF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHH SACHEIGHIVLELSSNHKETPAWSYAKREDNEIACDMFAAELLMPYDQFKADVDKAEPSF HHHHHHHHEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCH ELVERLRAKYVTSFSATASRVAAVTDYPCAFVTMNSSVIRHASRSAALRTLNAWIAPKSP HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCC IPDGSVARQLVKDGQRSGESPDVSQDVWFQDWPQGYDLTELAKHYSQYDETFALLWFEGD CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECC SGPEEPVNTFSGKPQEDDGGLKELDGVLQFSKRTKRR CCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA