| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787428
Identifier: 91787428
GI number: 91787428
Start: 1589776
End: 1590789
Strand: Direct
Name: 91787428
Synonym: Bpro_1538
Alternate gene names: NA
Gene position: 1589776-1590789 (Clockwise)
Preceding gene: 91787427
Following gene: 91787435
Centisome position: 30.57
GC content: 58.09
Gene sequence:
>1014_bases ATGAACCTCCACACCATTCCCGTTCGCCCCTTTGCCGAAGGGATCATTCGCATTGCCACCACTTCCGAGCCCGGCGCAGA GAAGATTGTGTTTGACGGCAGCATGGAAATCCTCTCGCGTCATCACCAGGCACGTGAGGCAAATGCGATTGAAGTCCCCC GTCTGGCGAAGCACCCCATTCGGGATAAGTTGATGGAAGCAAAGCCCAACAAGGAAGCCCGGAAGCTGGTGGAAGTGCCA ATCCGCATGTTCTTTGGCAAGACCAGCAATGCCCTGACAGTGGCCTACCAGGCGTATGACGCAGATGGCCGCCCTGTTTG CCGGGGCAACGGGGAAACCGCCAAACGCACCTCACTGTCCGATGAAAACGTGCGCGTGGTGATGGATGCGCCTTGCTCAG GGGCTGAAAGCTGCGAGTTTGTAGCCTCTGGCCAGGCACGGTGCCGGCGCCAGGTCTGCATGTCTGTGCAGATACCCGGC CAGGACAACCCGCTGAGCACTTTCGAGGTCCGTTCCTCGTCATACAACACCTACAAGACCCTCAAGGGCCAGCTGGAGCT GGTGGAACGACGTTTCGGTGGGCTGCGCCATGTTCCGCTCAAGCTCCAGATCTGGCAGACCTCCAATCAGGCCAGTGACT TCGAATCGTTCGATGTCTTCAAAATCGCCTTGGAAACGGCTACTGAATTGGAAGCCATGAAGGCCGTCAAGATCGCCCGG ACAGAAGAGTCGGAAGCGGGTTTGGAGTCTGATGTGGATACGGCCTACACAGCCGCCACCGATGGTGTGGGCGAAGAAGA TTTTGAAATTGTGACTGACTTTTACACCCAGCGGCCAGCTACTGCAGCTCGTCGAAGTGGCGGCGCCTCGCTTGTTGACC AGCTGACGGGTGCAACGGGACAGGTTGCGGGCACATCCCTTGCGGAAAATGTCATTGCCCATGCTATGGCGCGTGCGGGT GAGGACTCCGGGAAGAAAAAGGCCCACTGCTCCGGGTCAACAATCCAAGCCTGA
Upstream 100 bases:
>100_bases TACAAGAAACCGCCCACCTGACACTTGACAACTGATGTTTGTGTGTTGATATGGGTATGCAACGCGCTCTTGGCGCACTA TCAATTCGGAGAGCTACCAA
Downstream 100 bases:
>100_bases TTTCTGAATCCAGATGAGCAATCAAAACATCATACGACTGGTTATTGGAGATGTGACTTAACCCATTGAACTCACCGGCG TCTCCGATGCTATTGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MNLHTIPVRPFAEGIIRIATTSEPGAEKIVFDGSMEILSRHHQAREANAIEVPRLAKHPIRDKLMEAKPNKEARKLVEVP IRMFFGKTSNALTVAYQAYDADGRPVCRGNGETAKRTSLSDENVRVVMDAPCSGAESCEFVASGQARCRRQVCMSVQIPG QDNPLSTFEVRSSSYNTYKTLKGQLELVERRFGGLRHVPLKLQIWQTSNQASDFESFDVFKIALETATELEAMKAVKIAR TEESEAGLESDVDTAYTAATDGVGEEDFEIVTDFYTQRPATAARRSGGASLVDQLTGATGQVAGTSLAENVIAHAMARAG EDSGKKKAHCSGSTIQA
Sequences:
>Translated_337_residues MNLHTIPVRPFAEGIIRIATTSEPGAEKIVFDGSMEILSRHHQAREANAIEVPRLAKHPIRDKLMEAKPNKEARKLVEVP IRMFFGKTSNALTVAYQAYDADGRPVCRGNGETAKRTSLSDENVRVVMDAPCSGAESCEFVASGQARCRRQVCMSVQIPG QDNPLSTFEVRSSSYNTYKTLKGQLELVERRFGGLRHVPLKLQIWQTSNQASDFESFDVFKIALETATELEAMKAVKIAR TEESEAGLESDVDTAYTAATDGVGEEDFEIVTDFYTQRPATAARRSGGASLVDQLTGATGQVAGTSLAENVIAHAMARAG EDSGKKKAHCSGSTIQA >Mature_337_residues MNLHTIPVRPFAEGIIRIATTSEPGAEKIVFDGSMEILSRHHQAREANAIEVPRLAKHPIRDKLMEAKPNKEARKLVEVP IRMFFGKTSNALTVAYQAYDADGRPVCRGNGETAKRTSLSDENVRVVMDAPCSGAESCEFVASGQARCRRQVCMSVQIPG QDNPLSTFEVRSSSYNTYKTLKGQLELVERRFGGLRHVPLKLQIWQTSNQASDFESFDVFKIALETATELEAMKAVKIAR TEESEAGLESDVDTAYTAATDGVGEEDFEIVTDFYTQRPATAARRSGGASLVDQLTGATGQVAGTSLAENVIAHAMARAG EDSGKKKAHCSGSTIQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36629; Mature: 36629
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLHTIPVRPFAEGIIRIATTSEPGAEKIVFDGSMEILSRHHQAREANAIEVPRLAKHPI CCCEECCCCHHHCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCHHHCCCH RDKLMEAKPNKEARKLVEVPIRMFFGKTSNALTVAYQAYDADGRPVCRGNGETAKRTSLS HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEECCCCCCHHHCCCC DENVRVVMDAPCSGAESCEFVASGQARCRRQVCMSVQIPGQDNPLSTFEVRSSSYNTYKT CCCEEEEEECCCCCCCCCHHHHCCHHHHHHHHHEEEECCCCCCCCCEEEEECCCCCHHHH LKGQLELVERRFGGLRHVPLKLQIWQTSNQASDFESFDVFKIALETATELEAMKAVKIAR HHHHHHHHHHHHCCCEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC TEESEAGLESDVDTAYTAATDGVGEEDFEIVTDFYTQRPATAARRSGGASLVDQLTGATG CCCHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCC QVAGTSLAENVIAHAMARAGEDSGKKKAHCSGSTIQA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNLHTIPVRPFAEGIIRIATTSEPGAEKIVFDGSMEILSRHHQAREANAIEVPRLAKHPI CCCEECCCCHHHCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCHHHCCCH RDKLMEAKPNKEARKLVEVPIRMFFGKTSNALTVAYQAYDADGRPVCRGNGETAKRTSLS HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEECCCCCCHHHCCCC DENVRVVMDAPCSGAESCEFVASGQARCRRQVCMSVQIPGQDNPLSTFEVRSSSYNTYKT CCCEEEEEECCCCCCCCCHHHHCCHHHHHHHHHEEEECCCCCCCCCEEEEECCCCCHHHH LKGQLELVERRFGGLRHVPLKLQIWQTSNQASDFESFDVFKIALETATELEAMKAVKIAR HHHHHHHHHHHHCCCEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC TEESEAGLESDVDTAYTAATDGVGEEDFEIVTDFYTQRPATAARRSGGASLVDQLTGATG CCCHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCC QVAGTSLAENVIAHAMARAGEDSGKKKAHCSGSTIQA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA