| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is mhpD2 [H]
Identifier: 91787407
GI number: 91787407
Start: 1569056
End: 1569898
Strand: Direct
Name: mhpD2 [H]
Synonym: Bpro_1513
Alternate gene names: 91787407
Gene position: 1569056-1569898 (Clockwise)
Preceding gene: 91787405
Following gene: 91787409
Centisome position: 30.17
GC content: 64.41
Gene sequence:
>843_bases ATGAGTTCCCCACTCCTGTTTTCCAGCCTCGTGTCCGACCTGTCGCGTGCCCGGCTTCACGCGGAGCCTTTGCGCTGGCC CGCGACGGTACCGTCTGATGTAGGCACAGCCTACGCTGCGGCGCTGGCTGTGCGCGAGGAGCGCTGTGCCGCCGGAGAGC GCGCCGCAGGCTACAAAGTCGGCTTTACCAACCGCAACCTGTGGCCGCGCTATGAGGTCTATGCGCCCATCTGGGGCACT GTTTGGCAAGGTGGCTTGACGCTGATTGATGCAGGGGCGCCGAACATCGGCAAGGTGCGATTGGAGGGCCTCTGCGAGCC CCGCATCGAACCCGAGATCGTGTTTTGCCTGCGCTTCCCGCCACCGCCCGCATGCACGCTGGCGCAGCTGGTGGACGCCA TTGACTGGATAGCCCACGGCTTTGAGATTGTGCACACCCATTTCCCGGGCTGGAAGTTCACGGCCGCACAGGCGGTGGCG GATGCCGGCCTCCATGCCCACCTGCTGGTGGGCCATCCCGTGAAATTGACCGCAGGTATTGCGCCGGACGCGCTGGTTCA GGCGCTCGCCGGCTTGCGGCTGAGGCTTTACGTGGATGGGGAGCTGAAGGAAGAAGGCGTGGGCGCCAATGTGCTGGATG GGCCGTTGCAGGCTTTATTGCATTTTGTGGAGGCGCTGCGCGCCACCCCGGGCGCACCACCACTGCTGGCCGGCGATCTG ATCACCACGGGCAGTCTGACCGATGCCTGGCCGGTACAGGGCGGACAAATATGGCACACGGACATTCAATCGCCAGACCC GGTGGCAGAAGACCTCGAGGGGTTGTGCCTGCGTTTTGAATGA
Upstream 100 bases:
>100_bases CCATGTTGCCATTGTGAAGTATGGCTGGGGTGTATCGCTGTGGTCTGCGAAATGGCGCTCCCCGTTGCGCGGTGGGTCTG GTTGTGGCTAACATGCAGCC
Downstream 100 bases:
>100_bases CATTGATGGCCTCAAGCCTTGATCCCCTGAAGCCCTGATCCCCTGAAACCTGAAACCCTTTGGCTGGCACGCGCTGGAGC GCGGAGCCGCTGGCAACCCG
Product: hydratase/decarboxylase
Products: NA
Alternate protein names: 2-hydroxypentadienoic acid hydratase 2 [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSSPLLFSSLVSDLSRARLHAEPLRWPATVPSDVGTAYAAALAVREERCAAGERAAGYKVGFTNRNLWPRYEVYAPIWGT VWQGGLTLIDAGAPNIGKVRLEGLCEPRIEPEIVFCLRFPPPPACTLAQLVDAIDWIAHGFEIVHTHFPGWKFTAAQAVA DAGLHAHLLVGHPVKLTAGIAPDALVQALAGLRLRLYVDGELKEEGVGANVLDGPLQALLHFVEALRATPGAPPLLAGDL ITTGSLTDAWPVQGGQIWHTDIQSPDPVAEDLEGLCLRFE
Sequences:
>Translated_280_residues MSSPLLFSSLVSDLSRARLHAEPLRWPATVPSDVGTAYAAALAVREERCAAGERAAGYKVGFTNRNLWPRYEVYAPIWGT VWQGGLTLIDAGAPNIGKVRLEGLCEPRIEPEIVFCLRFPPPPACTLAQLVDAIDWIAHGFEIVHTHFPGWKFTAAQAVA DAGLHAHLLVGHPVKLTAGIAPDALVQALAGLRLRLYVDGELKEEGVGANVLDGPLQALLHFVEALRATPGAPPLLAGDL ITTGSLTDAWPVQGGQIWHTDIQSPDPVAEDLEGLCLRFE >Mature_279_residues SSPLLFSSLVSDLSRARLHAEPLRWPATVPSDVGTAYAAALAVREERCAAGERAAGYKVGFTNRNLWPRYEVYAPIWGTV WQGGLTLIDAGAPNIGKVRLEGLCEPRIEPEIVFCLRFPPPPACTLAQLVDAIDWIAHGFEIVHTHFPGWKFTAAQAVAD AGLHAHLLVGHPVKLTAGIAPDALVQALAGLRLRLYVDGELKEEGVGANVLDGPLQALLHFVEALRATPGAPPLLAGDLI TTGSLTDAWPVQGGQIWHTDIQSPDPVAEDLEGLCLRFE
Specific function: Catalyzes the conversion of 2-hydroxypentadienoic acid (enolic form of 2-oxopent-4-enoate) to 4-hydroxy-2-ketopentanoic acid [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family. MhpD subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=267, Percent_Identity=26.2172284644195, Blast_Score=72, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.2.1.80 [H]
Molecular weight: Translated: 30045; Mature: 29914
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPLLFSSLVSDLSRARLHAEPLRWPATVPSDVGTAYAAALAVREERCAAGERAAGYKV CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE GFTNRNLWPRYEVYAPIWGTVWQGGLTLIDAGAPNIGKVRLEGLCEPRIEPEIVFCLRFP ECCCCCCCCCEEEECCHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCCCEEEEEEECC PPPACTLAQLVDAIDWIAHGFEIVHTHFPGWKFTAAQAVADAGLHAHLLVGHPVKLTAGI CCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEECCC APDALVQALAGLRLRLYVDGELKEEGVGANVLDGPLQALLHFVEALRATPGAPPLLAGDL CHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCE ITTGSLTDAWPVQGGQIWHTDIQSPDPVAEDLEGLCLRFE EECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCEEEECC >Mature Secondary Structure SSPLLFSSLVSDLSRARLHAEPLRWPATVPSDVGTAYAAALAVREERCAAGERAAGYKV CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE GFTNRNLWPRYEVYAPIWGTVWQGGLTLIDAGAPNIGKVRLEGLCEPRIEPEIVFCLRFP ECCCCCCCCCEEEECCHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCCCEEEEEEECC PPPACTLAQLVDAIDWIAHGFEIVHTHFPGWKFTAAQAVADAGLHAHLLVGHPVKLTAGI CCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEECCC APDALVQALAGLRLRLYVDGELKEEGVGANVLDGPLQALLHFVEALRATPGAPPLLAGDL CHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCE ITTGSLTDAWPVQGGQIWHTDIQSPDPVAEDLEGLCLRFE EECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA