Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is rhmT [H]

Identifier: 91787386

GI number: 91787386

Start: 1547505

End: 1548815

Strand: Direct

Name: rhmT [H]

Synonym: Bpro_1492

Alternate gene names: 91787386

Gene position: 1547505-1548815 (Clockwise)

Preceding gene: 91787385

Following gene: 91787387

Centisome position: 29.76

GC content: 64.3

Gene sequence:

>1311_bases
ATGAACCCCCAAATCAACCCCGAACTCGAGCGGGTCACGGCCAAGGCCATTCGCCGGCTCGTGCCTTTTCTTTTGCTGAT
GTATGTGCTGGCCTTTCTGGACCGCGCCAACATCGGCTTTGCCAAGCAGGCCTTCCAGCTCGACACCGGCGTGTCGAACG
CCGCTTATGCCTTCGGCGCCGGCATCTTCTTCATTGGCTACGCGCTGTTCGAAGTTCCCAGCAACCTGATCATGCACCGC
GTCGGCGCCCGCGCCTGGATGTGCCGCATCATGGTCACGTGGGGGCTGGTGTCGGCGGCGCTGATGTTCGTCACCAGCGA
GACCTCGTTTTACGTGCTGCGCTTTCTGCTCGGCGTGGCCGAAGCGGGCTTCTTTCCCGGCGTGATCTATTTCCTCACGA
AGTGGTTCCCGGTCCATGCGCGGACCCGCGTGATCGGCATGTTTTATTTCGGCGCGCCACTGGCTTTCATTTTTGGCAGC
CCGCTGTCGGGACTCCTGCTGGAAATGCAGGGCGCGTTCGGCCTGCACGGCTGGCAGTGGATGTTTCTCATTGAAGGCCT
GCTGGCCAGCGCGGTCGGCGTCTGGGCCTTCTGGTACCTGGACAACCGGCCTGAAGATGCGAAGTGGCTGACGCTGGCCG
AGCGTGCCACGCTGGCCACGGCAATTGCCCGGGAAGAGCAGCACAAGGCCGAGCATGGACCGCGCAGCGTGCTGGCCGCG
CTGACCAATGGGCGCGTGCTCTTCCTGGCGGCAATCTATTTCATCATCCAGATGAGCGTTTACGGCGTCGTGTTCTACCT
GCCCACCCAAGTAGCGACACTGCTGGGCAAGAAGGTCGGCTTCGACGTCGGCCTGGTGACGGCCATTCCCTGGATTTGCG
CCGTCATTGCCGTCTACCTGATTCCCCGCCTGGCCGAGCGCCGGCAGCAGCACGCCGGCATGGCCTGCGCGACGCTGGTG
GTTTGCGCCGCGGGCATTGCCCTGTCGGTGTCGGCCGGCTCACCGCTGCTGTCGTTGATTGCGCTGTGCTTTGCCGCCGC
CGGCTTCATCGCCGTCCAGCCCCTGTTCTGGACCTTCCCGACGGCCTACCTTGGTGGCGCTGCAGCGGCCGGTGGCATTG
CACTGATCAACTCGATCGGCTCGCTGGGCGGCTTCTTTGCACCGAACGTCAAGACCTGGGCCGAAAAAGCTTTCGAGTCG
CCAAGCGCCGGGCTGTACCTGCTGGCCGGTACAACGCTGCTGGGCGCAGTGCTGTTCCTGGCGCTGCGCGCCCGGCAGCC
CGTAGCAGTCGCAGTGGTCCGCTCGGCCTGA

Upstream 100 bases:

>100_bases
AGCCCAAGCGCGGCGCCGGCCCCCAGGCTGGCTTGCGCTGCCGCATGAGCAAGAAGCAGCCGCAGAGCTGCACCACACCC
CAACCCCGGAGACACATTTC

Downstream 100 bases:

>100_bases
CCCCGTTCACCTTCATCCAGCAGCAACTCCAGAAGCAACACAAGCAATCATGAACAACATGCCGACCATCAAGCACGTGC
GTGCCTTCACCGTCCGCGGC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MNPQINPELERVTAKAIRRLVPFLLLMYVLAFLDRANIGFAKQAFQLDTGVSNAAYAFGAGIFFIGYALFEVPSNLIMHR
VGARAWMCRIMVTWGLVSAALMFVTSETSFYVLRFLLGVAEAGFFPGVIYFLTKWFPVHARTRVIGMFYFGAPLAFIFGS
PLSGLLLEMQGAFGLHGWQWMFLIEGLLASAVGVWAFWYLDNRPEDAKWLTLAERATLATAIAREEQHKAEHGPRSVLAA
LTNGRVLFLAAIYFIIQMSVYGVVFYLPTQVATLLGKKVGFDVGLVTAIPWICAVIAVYLIPRLAERRQQHAGMACATLV
VCAAGIALSVSAGSPLLSLIALCFAAAGFIAVQPLFWTFPTAYLGGAAAAGGIALINSIGSLGGFFAPNVKTWAEKAFES
PSAGLYLLAGTTLLGAVLFLALRARQPVAVAVVRSA

Sequences:

>Translated_436_residues
MNPQINPELERVTAKAIRRLVPFLLLMYVLAFLDRANIGFAKQAFQLDTGVSNAAYAFGAGIFFIGYALFEVPSNLIMHR
VGARAWMCRIMVTWGLVSAALMFVTSETSFYVLRFLLGVAEAGFFPGVIYFLTKWFPVHARTRVIGMFYFGAPLAFIFGS
PLSGLLLEMQGAFGLHGWQWMFLIEGLLASAVGVWAFWYLDNRPEDAKWLTLAERATLATAIAREEQHKAEHGPRSVLAA
LTNGRVLFLAAIYFIIQMSVYGVVFYLPTQVATLLGKKVGFDVGLVTAIPWICAVIAVYLIPRLAERRQQHAGMACATLV
VCAAGIALSVSAGSPLLSLIALCFAAAGFIAVQPLFWTFPTAYLGGAAAAGGIALINSIGSLGGFFAPNVKTWAEKAFES
PSAGLYLLAGTTLLGAVLFLALRARQPVAVAVVRSA
>Mature_436_residues
MNPQINPELERVTAKAIRRLVPFLLLMYVLAFLDRANIGFAKQAFQLDTGVSNAAYAFGAGIFFIGYALFEVPSNLIMHR
VGARAWMCRIMVTWGLVSAALMFVTSETSFYVLRFLLGVAEAGFFPGVIYFLTKWFPVHARTRVIGMFYFGAPLAFIFGS
PLSGLLLEMQGAFGLHGWQWMFLIEGLLASAVGVWAFWYLDNRPEDAKWLTLAERATLATAIAREEQHKAEHGPRSVLAA
LTNGRVLFLAAIYFIIQMSVYGVVFYLPTQVATLLGKKVGFDVGLVTAIPWICAVIAVYLIPRLAERRQQHAGMACATLV
VCAAGIALSVSAGSPLLSLIALCFAAAGFIAVQPLFWTFPTAYLGGAAAAGGIALINSIGSLGGFFAPNVKTWAEKAFES
PSAGLYLLAGTTLLGAVLFLALRARQPVAVAVVRSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=421, Percent_Identity=50.5938242280285, Blast_Score=417, Evalue=1e-118,
Organism=Escherichia coli, GI87082320, Length=445, Percent_Identity=24.2696629213483, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI2367379, Length=220, Percent_Identity=25.9090909090909, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322025, Length=250, Percent_Identity=27.2, Blast_Score=94, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6319876, Length=223, Percent_Identity=24.6636771300448, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322612, Length=263, Percent_Identity=21.6730038022814, Blast_Score=67, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6324410, Length=153, Percent_Identity=26.1437908496732, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6321698, Length=273, Percent_Identity=21.978021978022, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323032, Length=217, Percent_Identity=26.2672811059908, Blast_Score=63, Evalue=1e-10,
Organism=Drosophila melanogaster, GI24658696, Length=314, Percent_Identity=25.796178343949, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47082; Mature: 47082

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQINPELERVTAKAIRRLVPFLLLMYVLAFLDRANIGFAKQAFQLDTGVSNAAYAFGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHH
GIFFIGYALFEVPSNLIMHRVGARAWMCRIMVTWGLVSAALMFVTSETSFYVLRFLLGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EAGFFPGVIYFLTKWFPVHARTRVIGMFYFGAPLAFIFGSPLSGLLLEMQGAFGLHGWQW
HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHH
MFLIEGLLASAVGVWAFWYLDNRPEDAKWLTLAERATLATAIAREEQHKAEHGPRSVLAA
HHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LTNGRVLFLAAIYFIIQMSVYGVVFYLPTQVATLLGKKVGFDVGLVTAIPWICAVIAVYL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IPRLAERRQQHAGMACATLVVCAAGIALSVSAGSPLLSLIALCFAAAGFIAVQPLFWTFP
HHHHHHHHHHHCCHHHHHHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TAYLGGAAAAGGIALINSIGSLGGFFAPNVKTWAEKAFESPSAGLYLLAGTTLLGAVLFL
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHH
ALRARQPVAVAVVRSA
HHHCCCCEEEEEEECC
>Mature Secondary Structure
MNPQINPELERVTAKAIRRLVPFLLLMYVLAFLDRANIGFAKQAFQLDTGVSNAAYAFGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHH
GIFFIGYALFEVPSNLIMHRVGARAWMCRIMVTWGLVSAALMFVTSETSFYVLRFLLGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EAGFFPGVIYFLTKWFPVHARTRVIGMFYFGAPLAFIFGSPLSGLLLEMQGAFGLHGWQW
HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHH
MFLIEGLLASAVGVWAFWYLDNRPEDAKWLTLAERATLATAIAREEQHKAEHGPRSVLAA
HHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LTNGRVLFLAAIYFIIQMSVYGVVFYLPTQVATLLGKKVGFDVGLVTAIPWICAVIAVYL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IPRLAERRQQHAGMACATLVVCAAGIALSVSAGSPLLSLIALCFAAAGFIAVQPLFWTFP
HHHHHHHHHHHCCHHHHHHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TAYLGGAAAAGGIALINSIGSLGGFFAPNVKTWAEKAFESPSAGLYLLAGTTLLGAVLFL
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHH
ALRARQPVAVAVVRSA
HHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]