Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787360

Identifier: 91787360

GI number: 91787360

Start: 1516757

End: 1517764

Strand: Reverse

Name: 91787360

Synonym: Bpro_1466

Alternate gene names: NA

Gene position: 1517764-1516757 (Counterclockwise)

Preceding gene: 91787361

Following gene: 91787359

Centisome position: 29.19

GC content: 67.26

Gene sequence:

>1008_bases
ATGTCAAGCACGTTCAGAGCTCCAGGTACTTCAGGCACTTTCTTCAACCCACTGCGCCGCGCACTGGTCGCCAGCAGCTT
CCTCTTTGCCGGGCTGGCCTGCGCGGCGGGCTACCCCGAGCGGCCTCTTACGCTGGTCGCGCCCTACCCGGCCGGCGGCG
CAGCCGACGTGCTGGCCCGCCTCCTGGCCCGCAAGCTCGAAGAGCAACTGGGCCAGCCGGTGGTGGTGGAGAACAAGCCC
GGCGCCGGCACCGCCATTGGCGCGGCCGCCGTGGCCAACGCCAAACCCGACGGCTACACGCTGCTCGTCAGCTCCAACTC
CACCTTCACGCTGAACCCGGCCTTGCAGGCCAAGCTCTCGTACGACCCGGTCAAGGGCTTCGAGCCCATCGGCATGGTCG
GCTCGGTGGCGCTGGCGGTGCTGGCCCATCCGTCCGTCACGGCGAGCACCGTGCCACAGCTGGTGGCCGCCGCCAAAGCC
AATCCGGACAAGTTCCTCTATGGCAGTTTCGGCAACGGCACCAGCTCCAACTTTGCCGGGGCCATGTTCAACAGCGCCAC
CGGCCTGAAAATGACCCATGTGCCTTACAAGGGCAGCGCGCCGCTGATGACCGACCTGATCGGCGGGCAGATTCCCCTGT
CGTTTGACACCGTGGTGGCTGCGGCACCACAACTCAAGACCGGCAAGATCAAGGTGCTGGCCGTCACAACGGCAAAGCGC
TCGGCCCTGCTGCCCGACGTGCCGACCGTGGCCGAGTCGGGCTACCCCGGTTTCGACATGACCGCCTGGCTGGCGCTGGT
AGCACCGCGCGGCCTGCCGGCCGACGTCAAGGCCCGGCTCGACAAGGCCCTGGCTACCACGATGGCCAGCACCGACACCC
AGGACAAGATGAAGGCTGCCGGCTTCGAGCCAGGCTACCGCGCCATTGCCGACTGGCCCGGCATGGTCACCGCCGACATC
GCCCGCATGAAAGCCATTGCCGAGCGCTCGCAAATCAAGGTGGACTGA

Upstream 100 bases:

>100_bases
TTCGTTGCGGCGCTGGACGCCGTGGTTACGGCACGCCATGCGCTGTTGCCCGTTGCAGGTTGAATCGTTTTCTTTTCTTT
TCTTTTTACGAGAGGTCATC

Downstream 100 bases:

>100_bases
TATGACGGCCCCCACGCTCGGCACTGACGTGTCCTCGCTGCCCCCCGAGGGGGCGCATTTCGCCTTGGGGCGGCCCGGCG
GCGAAACAGCAGCCTCCACG

Product: hypothetical protein

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSSTFRAPGTSGTFFNPLRRALVASSFLFAGLACAAGYPERPLTLVAPYPAGGAADVLARLLARKLEEQLGQPVVVENKP
GAGTAIGAAAVANAKPDGYTLLVSSNSTFTLNPALQAKLSYDPVKGFEPIGMVGSVALAVLAHPSVTASTVPQLVAAAKA
NPDKFLYGSFGNGTSSNFAGAMFNSATGLKMTHVPYKGSAPLMTDLIGGQIPLSFDTVVAAAPQLKTGKIKVLAVTTAKR
SALLPDVPTVAESGYPGFDMTAWLALVAPRGLPADVKARLDKALATTMASTDTQDKMKAAGFEPGYRAIADWPGMVTADI
ARMKAIAERSQIKVD

Sequences:

>Translated_335_residues
MSSTFRAPGTSGTFFNPLRRALVASSFLFAGLACAAGYPERPLTLVAPYPAGGAADVLARLLARKLEEQLGQPVVVENKP
GAGTAIGAAAVANAKPDGYTLLVSSNSTFTLNPALQAKLSYDPVKGFEPIGMVGSVALAVLAHPSVTASTVPQLVAAAKA
NPDKFLYGSFGNGTSSNFAGAMFNSATGLKMTHVPYKGSAPLMTDLIGGQIPLSFDTVVAAAPQLKTGKIKVLAVTTAKR
SALLPDVPTVAESGYPGFDMTAWLALVAPRGLPADVKARLDKALATTMASTDTQDKMKAAGFEPGYRAIADWPGMVTADI
ARMKAIAERSQIKVD
>Mature_334_residues
SSTFRAPGTSGTFFNPLRRALVASSFLFAGLACAAGYPERPLTLVAPYPAGGAADVLARLLARKLEEQLGQPVVVENKPG
AGTAIGAAAVANAKPDGYTLLVSSNSTFTLNPALQAKLSYDPVKGFEPIGMVGSVALAVLAHPSVTASTVPQLVAAAKAN
PDKFLYGSFGNGTSSNFAGAMFNSATGLKMTHVPYKGSAPLMTDLIGGQIPLSFDTVVAAAPQLKTGKIKVLAVTTAKRS
ALLPDVPTVAESGYPGFDMTAWLALVAPRGLPADVKARLDKALATTMASTDTQDKMKAAGFEPGYRAIADWPGMVTADIA
RMKAIAERSQIKVD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34571; Mature: 34440

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTFRAPGTSGTFFNPLRRALVASSFLFAGLACAAGYPERPLTLVAPYPAGGAADVLAR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH
LLARKLEEQLGQPVVVENKPGAGTAIGAAAVANAKPDGYTLLVSSNSTFTLNPALQAKLS
HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCEEEECHHHEEEEC
YDPVKGFEPIGMVGSVALAVLAHPSVTASTVPQLVAAAKANPDKFLYGSFGNGTSSNFAG
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCH
AMFNSATGLKMTHVPYKGSAPLMTDLIGGQIPLSFDTVVAAAPQLKTGKIKVLAVTTAKR
HHHCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCC
SALLPDVPTVAESGYPGFDMTAWLALVAPRGLPADVKARLDKALATTMASTDTQDKMKAA
CCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHC
GFEPGYRAIADWPGMVTADIARMKAIAERSQIKVD
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSTFRAPGTSGTFFNPLRRALVASSFLFAGLACAAGYPERPLTLVAPYPAGGAADVLAR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH
LLARKLEEQLGQPVVVENKPGAGTAIGAAAVANAKPDGYTLLVSSNSTFTLNPALQAKLS
HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCEEEECHHHEEEEC
YDPVKGFEPIGMVGSVALAVLAHPSVTASTVPQLVAAAKANPDKFLYGSFGNGTSSNFAG
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCH
AMFNSATGLKMTHVPYKGSAPLMTDLIGGQIPLSFDTVVAAAPQLKTGKIKVLAVTTAKR
HHHCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCC
SALLPDVPTVAESGYPGFDMTAWLALVAPRGLPADVKARLDKALATTMASTDTQDKMKAA
CCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHC
GFEPGYRAIADWPGMVTADIARMKAIAERSQIKVD
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]