| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787360
Identifier: 91787360
GI number: 91787360
Start: 1516757
End: 1517764
Strand: Reverse
Name: 91787360
Synonym: Bpro_1466
Alternate gene names: NA
Gene position: 1517764-1516757 (Counterclockwise)
Preceding gene: 91787361
Following gene: 91787359
Centisome position: 29.19
GC content: 67.26
Gene sequence:
>1008_bases ATGTCAAGCACGTTCAGAGCTCCAGGTACTTCAGGCACTTTCTTCAACCCACTGCGCCGCGCACTGGTCGCCAGCAGCTT CCTCTTTGCCGGGCTGGCCTGCGCGGCGGGCTACCCCGAGCGGCCTCTTACGCTGGTCGCGCCCTACCCGGCCGGCGGCG CAGCCGACGTGCTGGCCCGCCTCCTGGCCCGCAAGCTCGAAGAGCAACTGGGCCAGCCGGTGGTGGTGGAGAACAAGCCC GGCGCCGGCACCGCCATTGGCGCGGCCGCCGTGGCCAACGCCAAACCCGACGGCTACACGCTGCTCGTCAGCTCCAACTC CACCTTCACGCTGAACCCGGCCTTGCAGGCCAAGCTCTCGTACGACCCGGTCAAGGGCTTCGAGCCCATCGGCATGGTCG GCTCGGTGGCGCTGGCGGTGCTGGCCCATCCGTCCGTCACGGCGAGCACCGTGCCACAGCTGGTGGCCGCCGCCAAAGCC AATCCGGACAAGTTCCTCTATGGCAGTTTCGGCAACGGCACCAGCTCCAACTTTGCCGGGGCCATGTTCAACAGCGCCAC CGGCCTGAAAATGACCCATGTGCCTTACAAGGGCAGCGCGCCGCTGATGACCGACCTGATCGGCGGGCAGATTCCCCTGT CGTTTGACACCGTGGTGGCTGCGGCACCACAACTCAAGACCGGCAAGATCAAGGTGCTGGCCGTCACAACGGCAAAGCGC TCGGCCCTGCTGCCCGACGTGCCGACCGTGGCCGAGTCGGGCTACCCCGGTTTCGACATGACCGCCTGGCTGGCGCTGGT AGCACCGCGCGGCCTGCCGGCCGACGTCAAGGCCCGGCTCGACAAGGCCCTGGCTACCACGATGGCCAGCACCGACACCC AGGACAAGATGAAGGCTGCCGGCTTCGAGCCAGGCTACCGCGCCATTGCCGACTGGCCCGGCATGGTCACCGCCGACATC GCCCGCATGAAAGCCATTGCCGAGCGCTCGCAAATCAAGGTGGACTGA
Upstream 100 bases:
>100_bases TTCGTTGCGGCGCTGGACGCCGTGGTTACGGCACGCCATGCGCTGTTGCCCGTTGCAGGTTGAATCGTTTTCTTTTCTTT TCTTTTTACGAGAGGTCATC
Downstream 100 bases:
>100_bases TATGACGGCCCCCACGCTCGGCACTGACGTGTCCTCGCTGCCCCCCGAGGGGGCGCATTTCGCCTTGGGGCGGCCCGGCG GCGAAACAGCAGCCTCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSSTFRAPGTSGTFFNPLRRALVASSFLFAGLACAAGYPERPLTLVAPYPAGGAADVLARLLARKLEEQLGQPVVVENKP GAGTAIGAAAVANAKPDGYTLLVSSNSTFTLNPALQAKLSYDPVKGFEPIGMVGSVALAVLAHPSVTASTVPQLVAAAKA NPDKFLYGSFGNGTSSNFAGAMFNSATGLKMTHVPYKGSAPLMTDLIGGQIPLSFDTVVAAAPQLKTGKIKVLAVTTAKR SALLPDVPTVAESGYPGFDMTAWLALVAPRGLPADVKARLDKALATTMASTDTQDKMKAAGFEPGYRAIADWPGMVTADI ARMKAIAERSQIKVD
Sequences:
>Translated_335_residues MSSTFRAPGTSGTFFNPLRRALVASSFLFAGLACAAGYPERPLTLVAPYPAGGAADVLARLLARKLEEQLGQPVVVENKP GAGTAIGAAAVANAKPDGYTLLVSSNSTFTLNPALQAKLSYDPVKGFEPIGMVGSVALAVLAHPSVTASTVPQLVAAAKA NPDKFLYGSFGNGTSSNFAGAMFNSATGLKMTHVPYKGSAPLMTDLIGGQIPLSFDTVVAAAPQLKTGKIKVLAVTTAKR SALLPDVPTVAESGYPGFDMTAWLALVAPRGLPADVKARLDKALATTMASTDTQDKMKAAGFEPGYRAIADWPGMVTADI ARMKAIAERSQIKVD >Mature_334_residues SSTFRAPGTSGTFFNPLRRALVASSFLFAGLACAAGYPERPLTLVAPYPAGGAADVLARLLARKLEEQLGQPVVVENKPG AGTAIGAAAVANAKPDGYTLLVSSNSTFTLNPALQAKLSYDPVKGFEPIGMVGSVALAVLAHPSVTASTVPQLVAAAKAN PDKFLYGSFGNGTSSNFAGAMFNSATGLKMTHVPYKGSAPLMTDLIGGQIPLSFDTVVAAAPQLKTGKIKVLAVTTAKRS ALLPDVPTVAESGYPGFDMTAWLALVAPRGLPADVKARLDKALATTMASTDTQDKMKAAGFEPGYRAIADWPGMVTADIA RMKAIAERSQIKVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34571; Mature: 34440
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTFRAPGTSGTFFNPLRRALVASSFLFAGLACAAGYPERPLTLVAPYPAGGAADVLAR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH LLARKLEEQLGQPVVVENKPGAGTAIGAAAVANAKPDGYTLLVSSNSTFTLNPALQAKLS HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCEEEECHHHEEEEC YDPVKGFEPIGMVGSVALAVLAHPSVTASTVPQLVAAAKANPDKFLYGSFGNGTSSNFAG CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCH AMFNSATGLKMTHVPYKGSAPLMTDLIGGQIPLSFDTVVAAAPQLKTGKIKVLAVTTAKR HHHCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCC SALLPDVPTVAESGYPGFDMTAWLALVAPRGLPADVKARLDKALATTMASTDTQDKMKAA CCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHC GFEPGYRAIADWPGMVTADIARMKAIAERSQIKVD CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSTFRAPGTSGTFFNPLRRALVASSFLFAGLACAAGYPERPLTLVAPYPAGGAADVLAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH LLARKLEEQLGQPVVVENKPGAGTAIGAAAVANAKPDGYTLLVSSNSTFTLNPALQAKLS HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCEEEECHHHEEEEC YDPVKGFEPIGMVGSVALAVLAHPSVTASTVPQLVAAAKANPDKFLYGSFGNGTSSNFAG CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCH AMFNSATGLKMTHVPYKGSAPLMTDLIGGQIPLSFDTVVAAAPQLKTGKIKVLAVTTAKR HHHCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCC SALLPDVPTVAESGYPGFDMTAWLALVAPRGLPADVKARLDKALATTMASTDTQDKMKAA CCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHC GFEPGYRAIADWPGMVTADIARMKAIAERSQIKVD CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]