| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787295
Identifier: 91787295
GI number: 91787295
Start: 1437909
End: 1438373
Strand: Reverse
Name: 91787295
Synonym: Bpro_1400
Alternate gene names: NA
Gene position: 1438373-1437909 (Counterclockwise)
Preceding gene: 91787296
Following gene: 91787294
Centisome position: 27.66
GC content: 60.0
Gene sequence:
>465_bases ATGTCGGATATTGAAAAAGACCAGGTCGTTGGCGTGCTGAACCGGATACTTGAGGCCGAGCTCGCCGGCGTCGTCCGCTA CACCCACTACTCATTTCTGGTATTCGGGTTCGGCCGTATTCCGGTTGTTGCCTGGTTGCGCGAACAGGCCACTGAATCGC TGTTGCATGCCCAGCAAGCCGGGGAATGGATCACCACGCTCGGCGCCTATCCGTCGCTTGCGATCGGCAAGCTGCTGGAC AGCCACACCTTTGATATCGCCGCGATCCTGCGCGAGTCACTGGAAGCCGAGACGGGTGCCTTGAAGCTGTACCGCGAGCT ATTGACACTGGTGGAGCATCGCTCCGTCGCGCTGGAAGAATACGCTCGCCAGATGATCCAACTGGAAGAACTGCATGCCG GGGACGTGGACAAGATGCTGCGCAAACCGGGACATGCCGCGGCGTTCGCCCAGCCCCAAGGTTGA
Upstream 100 bases:
>100_bases AGACCGATCCTGGGCCGCGAGCGTCTGGATCGTGTGGAGACTTCGCCTGAGATGGTTGAGTTTCCTGTCCGTATTGAAAG AGCTTTAGGAGGGACGCGTC
Downstream 100 bases:
>100_bases CGGGAGCGGGTGCGGGGTAGAAGGCCTGACCCGGGACCGACAGCGACAGCCCGCCCGCAGAGCTGGCGAAACCGGAACCC TGAACGCCTTGGGAGAGTGT
Product: Ferritin and Dps
Products: NA
Alternate protein names: Ferritin And Dps; Bacterioferritin; Ferritin-Like Domain Subfamily; Dps Family Ferritin
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSDIEKDQVVGVLNRILEAELAGVVRYTHYSFLVFGFGRIPVVAWLREQATESLLHAQQAGEWITTLGAYPSLAIGKLLD SHTFDIAAILRESLEAETGALKLYRELLTLVEHRSVALEEYARQMIQLEELHAGDVDKMLRKPGHAAAFAQPQG
Sequences:
>Translated_154_residues MSDIEKDQVVGVLNRILEAELAGVVRYTHYSFLVFGFGRIPVVAWLREQATESLLHAQQAGEWITTLGAYPSLAIGKLLD SHTFDIAAILRESLEAETGALKLYRELLTLVEHRSVALEEYARQMIQLEELHAGDVDKMLRKPGHAAAFAQPQG >Mature_153_residues SDIEKDQVVGVLNRILEAELAGVVRYTHYSFLVFGFGRIPVVAWLREQATESLLHAQQAGEWITTLGAYPSLAIGKLLDS HTFDIAAILRESLEAETGALKLYRELLTLVEHRSVALEEYARQMIQLEELHAGDVDKMLRKPGHAAAFAQPQG
Specific function: Unknown
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17141; Mature: 17010
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIEKDQVVGVLNRILEAELAGVVRYTHYSFLVFGFGRIPVVAWLREQATESLLHAQQA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEWITTLGAYPSLAIGKLLDSHTFDIAAILRESLEAETGALKLYRELLTLVEHRSVALEE HHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YARQMIQLEELHAGDVDKMLRKPGHAAAFAQPQG HHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SDIEKDQVVGVLNRILEAELAGVVRYTHYSFLVFGFGRIPVVAWLREQATESLLHAQQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEWITTLGAYPSLAIGKLLDSHTFDIAAILRESLEAETGALKLYRELLTLVEHRSVALEE HHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YARQMIQLEELHAGDVDKMLRKPGHAAAFAQPQG HHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA