| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787273
Identifier: 91787273
GI number: 91787273
Start: 1416098
End: 1417033
Strand: Reverse
Name: 91787273
Synonym: Bpro_1378
Alternate gene names: NA
Gene position: 1417033-1416098 (Counterclockwise)
Preceding gene: 91787276
Following gene: 91787271
Centisome position: 27.25
GC content: 60.68
Gene sequence:
>936_bases ATGACAAAGAAACCCAATGCCGGAGAAACCACCATGGGAAACGTCATCTACGAAGCTTACCGCCGCAACCGCAACCGCAA CCTGAACCTGCGAGAGCAAGTTGAGCGTAAAGCCCGCGAAACCCGGGCTAAGGAAATCGATCGCTTGATCGTGGCACCGC TGCTTCGAGGGCTCAGACGGACCTTCAGCCGCGGACGGCAGCGCCCGCCTATCGCTTCCATCGCGCTGAGAGCTTGCGGC CTGATAGGCGTCGTGATTCTCGGTGGACTGCTCGTTGCCTGCGGTTCAAGCGTGCCCGACGCAGGCGCCGCCGTGGCCGC GCCGACCCGTGCTCAGACCAAAACAGTTGCGGAAAGACACTTTATCTTTGAACGGCTCGATCACTCGGTTGTGAATCAAC ACAGCACCGCGCACGAATCCGACCTGCCCGGAGCGTCCATCGCCGCGTATGGGGACTCCGTCGTCACCTACCAGCAAGCC CATGCGCTTGCCGAGCAGGGAAAACAGCAGGAAGCGGACGTGCTGGTACAGACCCGGGCCACCGAAGCCATGGATGCCAT TGCGGCCATGGCCAAGGAAAACAAAGGGTCGATTGAAGCCTTCTGGGATGCCGTCAAGGGCGCCGGTGGGAAGGCCTGGC AGGGTATGGCCGACTTGGGCAAGGATGAAACGCCCAAAGCCAAGCTCGCGCAGCTGCAGCAAACCCTGGCCGACAGGCAG GCGCGCGGTGCCCTGAATGACAGCACAGGCGTGACAGCAAGCTATGCCAAGGGCATCGCCAACCTTGAAGCTGAAATATC CAAACTGCAAGAGTTGGTCACGGCAAATCAGGCCGCTGCGAAAGCGCAAGGAGACGCCGATCAGATCAACGAGCGAGCCA CGACGGGGATACCGCAGCACGGTTCTTCTTTGAACGGCTCGATCACACGGTGGTGA
Upstream 100 bases:
>100_bases AGCTCACAACCTGACCAGGACGCACTGTGCGCATCGCGGCGAGGTCGCACTCACTTGGCGCGATGGACTTCACCACGACA CTTCTCACCAGGAGCTGCAT
Downstream 100 bases:
>100_bases ATCAACACAGCACCGCGCACGATTCCGACTTGCCCGGAGCGTCGATCGCCGCCTACGGAATGTAGAGCGCGCCATTGCCA ATGGGCCACAGGCGCGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTKKPNAGETTMGNVIYEAYRRNRNRNLNLREQVERKARETRAKEIDRLIVAPLLRGLRRTFSRGRQRPPIASIALRACG LIGVVILGGLLVACGSSVPDAGAAVAAPTRAQTKTVAERHFIFERLDHSVVNQHSTAHESDLPGASIAAYGDSVVTYQQA HALAEQGKQQEADVLVQTRATEAMDAIAAMAKENKGSIEAFWDAVKGAGGKAWQGMADLGKDETPKAKLAQLQQTLADRQ ARGALNDSTGVTASYAKGIANLEAEISKLQELVTANQAAAKAQGDADQINERATTGIPQHGSSLNGSITRW
Sequences:
>Translated_311_residues MTKKPNAGETTMGNVIYEAYRRNRNRNLNLREQVERKARETRAKEIDRLIVAPLLRGLRRTFSRGRQRPPIASIALRACG LIGVVILGGLLVACGSSVPDAGAAVAAPTRAQTKTVAERHFIFERLDHSVVNQHSTAHESDLPGASIAAYGDSVVTYQQA HALAEQGKQQEADVLVQTRATEAMDAIAAMAKENKGSIEAFWDAVKGAGGKAWQGMADLGKDETPKAKLAQLQQTLADRQ ARGALNDSTGVTASYAKGIANLEAEISKLQELVTANQAAAKAQGDADQINERATTGIPQHGSSLNGSITRW >Mature_310_residues TKKPNAGETTMGNVIYEAYRRNRNRNLNLREQVERKARETRAKEIDRLIVAPLLRGLRRTFSRGRQRPPIASIALRACGL IGVVILGGLLVACGSSVPDAGAAVAAPTRAQTKTVAERHFIFERLDHSVVNQHSTAHESDLPGASIAAYGDSVVTYQQAH ALAEQGKQQEADVLVQTRATEAMDAIAAMAKENKGSIEAFWDAVKGAGGKAWQGMADLGKDETPKAKLAQLQQTLADRQA RGALNDSTGVTASYAKGIANLEAEISKLQELVTANQAAAKAQGDADQINERATTGIPQHGSSLNGSITRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33285; Mature: 33154
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKPNAGETTMGNVIYEAYRRNRNRNLNLREQVERKARETRAKEIDRLIVAPLLRGLRR CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFSRGRQRPPIASIALRACGLIGVVILGGLLVACGSSVPDAGAAVAAPTRAQTKTVAERH HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH FIFERLDHSVVNQHSTAHESDLPGASIAAYGDSVVTYQQAHALAEQGKQQEADVLVQTRA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH TEAMDAIAAMAKENKGSIEAFWDAVKGAGGKAWQGMADLGKDETPKAKLAQLQQTLADRQ HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH ARGALNDSTGVTASYAKGIANLEAEISKLQELVTANQAAAKAQGDADQINERATTGIPQH HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC GSSLNGSITRW CCCCCCCCCCC >Mature Secondary Structure TKKPNAGETTMGNVIYEAYRRNRNRNLNLREQVERKARETRAKEIDRLIVAPLLRGLRR CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFSRGRQRPPIASIALRACGLIGVVILGGLLVACGSSVPDAGAAVAAPTRAQTKTVAERH HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH FIFERLDHSVVNQHSTAHESDLPGASIAAYGDSVVTYQQAHALAEQGKQQEADVLVQTRA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH TEAMDAIAAMAKENKGSIEAFWDAVKGAGGKAWQGMADLGKDETPKAKLAQLQQTLADRQ HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH ARGALNDSTGVTASYAKGIANLEAEISKLQELVTANQAAAKAQGDADQINERATTGIPQH HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC GSSLNGSITRW CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA