Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91787241

Identifier: 91787241

GI number: 91787241

Start: 1384016

End: 1384501

Strand: Reverse

Name: 91787241

Synonym: Bpro_1346

Alternate gene names: NA

Gene position: 1384501-1384016 (Counterclockwise)

Preceding gene: 91787242

Following gene: 91787240

Centisome position: 26.62

GC content: 50.0

Gene sequence:

>486_bases
GTGAACAAAAAATCTGAAGAACCTAGCACCATCGACTGCGAGCGCGAGATTCATGGTCAAAGTGTTGACTACTATCTCCA
GCAGCTTGTTTCACTTGCCAACGAGAATGAATACGAAATTGGCATAACGCTTTTGCTGGGCGGCAGCGTAGTCTCCGGAA
TCCTCATTGGCGGCAGGAAGTACTTTGACACCTTCGCTGCTGACTTTTCCGCGGCATGGACTGGCGAAGACAAAGATGAA
ATTCACAATTCGTTCGCTGCGTACGGCGATATTTACGACCCAGCAAAGCGAAAGCAACTGCCGATGCCGCCGCAATACAT
ACATTTGCAAAATGCGAGGATTCAGTTCCTAAACGGCAGCATGCCTACCAATGGAGGTGTTCTTTGGCGCGGCAAGATCA
ATGCCGTTTCTGGCTTTCATCTGGGGATGCTGGCGTACGGTGGCAACAATTCATTCATACCCAAGCCGGTTTACGAGGCG
GCTTAA

Upstream 100 bases:

>100_bases
AGAGGATGCACCCCCGAAACCTGCCGCCTAGAATTGACTGCAGAGTTAGCTCGGGACGGGGAAGTTTCTTTCATTCGTTA
GGTATCACAAGGAGATCGTT

Downstream 100 bases:

>100_bases
TTCGTTAGGTGCTACAGGGCCTATTCGATCAAGCTCCAGTGCTTTTTCCACCGCGCCTCTGCGGCGCTCTTTACACAGGA
GCTCACACGTTAGCGTAAGC

Product: gas vesicle protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MNKKSEEPSTIDCEREIHGQSVDYYLQQLVSLANENEYEIGITLLLGGSVVSGILIGGRKYFDTFAADFSAAWTGEDKDE
IHNSFAAYGDIYDPAKRKQLPMPPQYIHLQNARIQFLNGSMPTNGGVLWRGKINAVSGFHLGMLAYGGNNSFIPKPVYEA
A

Sequences:

>Translated_161_residues
MNKKSEEPSTIDCEREIHGQSVDYYLQQLVSLANENEYEIGITLLLGGSVVSGILIGGRKYFDTFAADFSAAWTGEDKDE
IHNSFAAYGDIYDPAKRKQLPMPPQYIHLQNARIQFLNGSMPTNGGVLWRGKINAVSGFHLGMLAYGGNNSFIPKPVYEA
A
>Mature_161_residues
MNKKSEEPSTIDCEREIHGQSVDYYLQQLVSLANENEYEIGITLLLGGSVVSGILIGGRKYFDTFAADFSAAWTGEDKDE
IHNSFAAYGDIYDPAKRKQLPMPPQYIHLQNARIQFLNGSMPTNGGVLWRGKINAVSGFHLGMLAYGGNNSFIPKPVYEA
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17779; Mature: 17779

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKSEEPSTIDCEREIHGQSVDYYLQQLVSLANENEYEIGITLLLGGSVVSGILIGGRK
CCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHCCCHH
YFDTFAADFSAAWTGEDKDEIHNSFAAYGDIYDPAKRKQLPMPPQYIHLQNARIQFLNGS
HHHHHHHCCCEECCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEECCCEEEEECCC
MPTNGGVLWRGKINAVSGFHLGMLAYGGNNSFIPKPVYEAA
CCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKKSEEPSTIDCEREIHGQSVDYYLQQLVSLANENEYEIGITLLLGGSVVSGILIGGRK
CCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHCCCHH
YFDTFAADFSAAWTGEDKDEIHNSFAAYGDIYDPAKRKQLPMPPQYIHLQNARIQFLNGS
HHHHHHHCCCEECCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEECCCEEEEECCC
MPTNGGVLWRGKINAVSGFHLGMLAYGGNNSFIPKPVYEAA
CCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA