| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is gmk
Identifier: 91787231
GI number: 91787231
Start: 1375816
End: 1376436
Strand: Reverse
Name: gmk
Synonym: Bpro_1335
Alternate gene names: 91787231
Gene position: 1376436-1375816 (Counterclockwise)
Preceding gene: 91787232
Following gene: 91787230
Centisome position: 26.47
GC content: 58.62
Gene sequence:
>621_bases ATGGACTACCCCGGAAACCTGTTTGTTGTGGCCGCCCCCAGTGGTGCGGGCAAATCCAGCCTGGTGAAGGCCCTGATGGA GCTGGACTCAGCCATCCAGCCCGCCGTTTCACACACCACGCGGCCTCCACGCGGGCAGGAAAAGCATGGCAGGGAGTACT TTTTCCTGTCGCCGGAAGAGTTTGACAGCATGGTACAGCGCGATGCATTTCTGGAGTGGGCGCATGTGCACGGGCACCGT TACGGCACCTCGCGGCAGGCCATCGAAGAGCGCATCGCGCACGGCAAAGACGTGATTCTGGAGATTGATTTCCAGGGTGC GATCAACATCAAGCGGATTTTCTCGAACGCCGTGCTGATTTTCATCCTCCCCCCGAGCTGGGAAGAATTGCGCTCCCGCC TGCAGCGGCGCGGCGAAGACAGCCCCGAAGTCATCGAATTGAGGCTGAAAAACGCCGCCACCGAGATGGCCCAGGCCAGG GAATTCGACTTCGTTATAATCAATGAGTTGTTTGAGCGGGCAGTTTTCGACCTGAAAACCATTGTCCATGCCCAGCGGCT CAAGTTTTCGGCCCAGCGACGCGCTCGCGCCGAGACTTTCAGGGCCCTTCAAATTCCTTAA
Upstream 100 bases:
>100_bases AGCAGATCCGCGAACAGGTGCAGAACATCGAGTGAGCCTGAGCGACAATCACTCAATACCGAATTACTACCAAATCAATA GCAATTAACGCCCACTAAGC
Downstream 100 bases:
>100_bases GTTATTGATCACACCGGAGATCACCATGGCCCGTATTACCGTCGAAGATTGCCTCGAAAAAATCCCCAACCGCTTCCAGC TGGTTTTGGCCGCCACTTAC
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MDYPGNLFVVAAPSGAGKSSLVKALMELDSAIQPAVSHTTRPPRGQEKHGREYFFLSPEEFDSMVQRDAFLEWAHVHGHR YGTSRQAIEERIAHGKDVILEIDFQGAINIKRIFSNAVLIFILPPSWEELRSRLQRRGEDSPEVIELRLKNAATEMAQAR EFDFVIINELFERAVFDLKTIVHAQRLKFSAQRRARAETFRALQIP
Sequences:
>Translated_206_residues MDYPGNLFVVAAPSGAGKSSLVKALMELDSAIQPAVSHTTRPPRGQEKHGREYFFLSPEEFDSMVQRDAFLEWAHVHGHR YGTSRQAIEERIAHGKDVILEIDFQGAINIKRIFSNAVLIFILPPSWEELRSRLQRRGEDSPEVIELRLKNAATEMAQAR EFDFVIINELFERAVFDLKTIVHAQRLKFSAQRRARAETFRALQIP >Mature_206_residues MDYPGNLFVVAAPSGAGKSSLVKALMELDSAIQPAVSHTTRPPRGQEKHGREYFFLSPEEFDSMVQRDAFLEWAHVHGHR YGTSRQAIEERIAHGKDVILEIDFQGAINIKRIFSNAVLIFILPPSWEELRSRLQRRGEDSPEVIELRLKNAATEMAQAR EFDFVIINELFERAVFDLKTIVHAQRLKFSAQRRARAETFRALQIP
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874831, Length=175, Percent_Identity=37.7142857142857, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI226874833, Length=175, Percent_Identity=37.7142857142857, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI4504221, Length=175, Percent_Identity=37.7142857142857, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI14780902, Length=188, Percent_Identity=27.6595744680851, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI38570142, Length=180, Percent_Identity=30, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI111154074, Length=159, Percent_Identity=31.4465408805031, Blast_Score=68, Evalue=4e-12, Organism=Homo sapiens, GI21361598, Length=190, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI4505237, Length=174, Percent_Identity=27.0114942528736, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI262118263, Length=174, Percent_Identity=27.0114942528736, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI262118255, Length=174, Percent_Identity=27.0114942528736, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI262118259, Length=174, Percent_Identity=27.0114942528736, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI21389483, Length=194, Percent_Identity=25.2577319587629, Blast_Score=64, Evalue=8e-11, Organism=Escherichia coli, GI1790080, Length=192, Percent_Identity=52.0833333333333, Blast_Score=194, Evalue=2e-51, Organism=Caenorhabditis elegans, GI193203132, Length=176, Percent_Identity=38.0681818181818, Blast_Score=124, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17508835, Length=176, Percent_Identity=38.0681818181818, Blast_Score=123, Evalue=6e-29, Organism=Caenorhabditis elegans, GI71984092, Length=134, Percent_Identity=32.8358208955224, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=182, Percent_Identity=40.1098901098901, Blast_Score=136, Evalue=2e-33, Organism=Drosophila melanogaster, GI21356141, Length=158, Percent_Identity=41.7721518987342, Blast_Score=117, Evalue=5e-27, Organism=Drosophila melanogaster, GI85816281, Length=131, Percent_Identity=31.2977099236641, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI85816106, Length=131, Percent_Identity=31.2977099236641, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI45551002, Length=131, Percent_Identity=31.2977099236641, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI116007136, Length=174, Percent_Identity=30.4597701149425, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45554481, Length=174, Percent_Identity=30.4597701149425, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45554489, Length=174, Percent_Identity=30.4597701149425, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24640542, Length=174, Percent_Identity=30.4597701149425, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI85724806, Length=174, Percent_Identity=30.4597701149425, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI161077626, Length=174, Percent_Identity=30.4597701149425, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI221330166, Length=127, Percent_Identity=29.1338582677165, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI221330162, Length=127, Percent_Identity=29.1338582677165, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_POLSJ (Q12DV7)
Other databases:
- EMBL: CP000316 - RefSeq: YP_548183.1 - ProteinModelPortal: Q12DV7 - SMR: Q12DV7 - STRING: Q12DV7 - GeneID: 4011982 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_1335 - NMPDR: fig|296591.1.peg.1923 - eggNOG: COG0194 - HOGENOM: HBG671982 - OMA: DIDWQGT - PhylomeDB: Q12DV7 - ProtClustDB: PRK00300 - BioCyc: PSP296591:BPRO_1335-MONOMER - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 23570; Mature: 23570
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYPGNLFVVAAPSGAGKSSLVKALMELDSAIQPAVSHTTRPPRGQEKHGREYFFLSPEE CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHH FDSMVQRDAFLEWAHVHGHRYGTSRQAIEERIAHGKDVILEIDFQGAINIKRIFSNAVLI HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCEEE FILPPSWEELRSRLQRRGEDSPEVIELRLKNAATEMAQAREFDFVIINELFERAVFDLKT EEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IVHAQRLKFSAQRRARAETFRALQIP HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDYPGNLFVVAAPSGAGKSSLVKALMELDSAIQPAVSHTTRPPRGQEKHGREYFFLSPEE CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHH FDSMVQRDAFLEWAHVHGHRYGTSRQAIEERIAHGKDVILEIDFQGAINIKRIFSNAVLI HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCEEE FILPPSWEELRSRLQRRGEDSPEVIELRLKNAATEMAQAREFDFVIINELFERAVFDLKT EEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IVHAQRLKFSAQRRARAETFRALQIP HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA