Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787192

Identifier: 91787192

GI number: 91787192

Start: 1337854

End: 1339638

Strand: Reverse

Name: 91787192

Synonym: Bpro_1296

Alternate gene names: NA

Gene position: 1339638-1337854 (Counterclockwise)

Preceding gene: 91787196

Following gene: 91787191

Centisome position: 25.76

GC content: 64.82

Gene sequence:

>1785_bases
ATGAAGAAAAGACTTAGCCGTGCCCTCGGCTGCCTCTGCCTCGCCGCCCCCATGGTGCTGGCGCAGACCCAAGCGCCCGC
CCCCGCCGCACCCGCTGCACCTTCCGGGCTCGCCGAAGCCAAAGCCGCGCAGGACGCAGCGCCGCCCGCCTCGCCGCTCG
ATAGCGCACTGTTTTACCAGCTGCTTGTGGGTGAAATCACCACGCAGGATGGAGAGCCCGCCGCGGGTTTCGCGCTGATG
CTGGACGCAGCCCGCAAAACGGGCGAGGCCCAGCTTTACCAGCGAGCCACCGATATTGCCCTGCAGTCGCGCTCCGGCGA
CGCCGCGCTGCAGGCGGCACAGGCCTGGAAGCAGGCCCAGCCTGCCTCGCGCGAGGCCAACCGCTATGTGCTGCAAATCC
TGATCGCACTGAACCGCATTCCCGAAACGGCAGACCTGCTGAAAACCGAGATCGCCCTGGCACCGGAGGCCGAGCGCAAT
GCGGTCCTGGCCGCAGTGCCGCGCGCCTACGCCCGTGTCAGTGACAAAAAATTGTCCAGCACCGTTGTGCAGGAGGGCCT
GGACACCTACCTGAACAATCCCGCCACCGCCGGCGCCGCCTGGGCCACCGTAGGACGCATGCGGCTGGCCGCAGACGACA
GCAATGGCGCACTCGACGCGGCCAAACGCGGCCAGGCCGCCGACGCTCACGCGGAAGGCCCGGCCATGCTGGCGCTGGAG
CTGATGGACCCCAAACTGCCCGAAGCAGAAGGCCTGGTCAGGAAATACCTTGAAGGCAACGCCAAGGCCCAGCCCGAATT
CCGCATGGCTTACGCACGGGCCCTGCTGGATGCACAGCGCTATGCAGAAGCGGCCACGCAGTTGCAGGCGGTGACCCGTG
AAAAACCCGACTACCCGGAAAGCTGGCTGGTGCTGGGCTCTTTGCAACTGCAGGACAACCAGCTCGCGCAGGCGCAGGCC
TCGCTGCAACGCTATGTCACGCTGGCGGAGCAGCAGGCTGCGGATACCGACCGTAACCGCGGACTGGCCCAAGCCTACCT
CTCGCTGTCGCAAGTGGCTGAAAAGCGCAAGGACTATGCAGCAGCGGAAAACTGGCTGAACAAAATCGAGGATGCGTCCG
AACTGACGGCGGCGCAAACCCGCCGCGCCTCCATCCTGGCGAGCCAGGGCAAGCTCGAAGAAGGCCGGAAGCTCATCCGC
CAGCTGCCCGAACGCAGCCCTGGTGATGCGCGGCTGAAGCTCAACGCCGAAGTCGGACTGCTTCGCGATCTGAAGCAATA
CCGGCTTGCCCATGATGTGCTGGCCGAGGCCCTGAGCAAGACGCCCGATGAACCGGAACTGCTGTACGACCAGGCCATGA
TGGCCGAAAAACTCGCATCGCTCGGCGAGATGGAGCGCCTGCTGCGCCAGGTCATCCAGCTCAAGCCCGACTATCACCAC
GCGTACAACGCGCTCGGTTATTCGCTGGCAGACCGCGGTGTTCGCCTGCCGGAAGCCCGTGACCTGATCCAGAAAGCGCT
CGGCTTCGCGCCGACCGACCCCTTTATCAAGGACAGCCTGGGCTGGGTTGAATACCGCATGGGCAACAAGACGGAAGCAC
TCCGCATTTTTGAGGCCGCCTACAAGGCCAAACCCGACGCGGAAATTGCCGCGCACTACGGGGAGGTCTTGTGGAGTCTG
GGCCAGCGCGAACGGGCGACGGCGATCTGGAAGGAAGGCTTGCTGTTGAACCCCGACAACGAGACCTTGCAGGAAACCCT
CAAGCGCCTGCGTGTCAAGCTGTAA

Upstream 100 bases:

>100_bases
GCATGGCTCACAGTCAGACGGCAAAAAACATCAACCCGCGACACAGACCCTGAGGACAAGAGGGAAAACGCATCCGCGGA
GCTTCAATTATCATGGGTTG

Downstream 100 bases:

>100_bases
TCCGGACCCCGCCCCTTGTTGCTCCTTGCCCGCCTGCGCTCAGCTTTTTTTTCAGGCTGCCTGATTGCTGCTTTTCTAAT
CGCAGGATGCGCCAATCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 594

Protein sequence:

>594_residues
MKKRLSRALGCLCLAAPMVLAQTQAPAPAAPAAPSGLAEAKAAQDAAPPASPLDSALFYQLLVGEITTQDGEPAAGFALM
LDAARKTGEAQLYQRATDIALQSRSGDAALQAAQAWKQAQPASREANRYVLQILIALNRIPETADLLKTEIALAPEAERN
AVLAAVPRAYARVSDKKLSSTVVQEGLDTYLNNPATAGAAWATVGRMRLAADDSNGALDAAKRGQAADAHAEGPAMLALE
LMDPKLPEAEGLVRKYLEGNAKAQPEFRMAYARALLDAQRYAEAATQLQAVTREKPDYPESWLVLGSLQLQDNQLAQAQA
SLQRYVTLAEQQAADTDRNRGLAQAYLSLSQVAEKRKDYAAAENWLNKIEDASELTAAQTRRASILASQGKLEEGRKLIR
QLPERSPGDARLKLNAEVGLLRDLKQYRLAHDVLAEALSKTPDEPELLYDQAMMAEKLASLGEMERLLRQVIQLKPDYHH
AYNALGYSLADRGVRLPEARDLIQKALGFAPTDPFIKDSLGWVEYRMGNKTEALRIFEAAYKAKPDAEIAAHYGEVLWSL
GQRERATAIWKEGLLLNPDNETLQETLKRLRVKL

Sequences:

>Translated_594_residues
MKKRLSRALGCLCLAAPMVLAQTQAPAPAAPAAPSGLAEAKAAQDAAPPASPLDSALFYQLLVGEITTQDGEPAAGFALM
LDAARKTGEAQLYQRATDIALQSRSGDAALQAAQAWKQAQPASREANRYVLQILIALNRIPETADLLKTEIALAPEAERN
AVLAAVPRAYARVSDKKLSSTVVQEGLDTYLNNPATAGAAWATVGRMRLAADDSNGALDAAKRGQAADAHAEGPAMLALE
LMDPKLPEAEGLVRKYLEGNAKAQPEFRMAYARALLDAQRYAEAATQLQAVTREKPDYPESWLVLGSLQLQDNQLAQAQA
SLQRYVTLAEQQAADTDRNRGLAQAYLSLSQVAEKRKDYAAAENWLNKIEDASELTAAQTRRASILASQGKLEEGRKLIR
QLPERSPGDARLKLNAEVGLLRDLKQYRLAHDVLAEALSKTPDEPELLYDQAMMAEKLASLGEMERLLRQVIQLKPDYHH
AYNALGYSLADRGVRLPEARDLIQKALGFAPTDPFIKDSLGWVEYRMGNKTEALRIFEAAYKAKPDAEIAAHYGEVLWSL
GQRERATAIWKEGLLLNPDNETLQETLKRLRVKL
>Mature_594_residues
MKKRLSRALGCLCLAAPMVLAQTQAPAPAAPAAPSGLAEAKAAQDAAPPASPLDSALFYQLLVGEITTQDGEPAAGFALM
LDAARKTGEAQLYQRATDIALQSRSGDAALQAAQAWKQAQPASREANRYVLQILIALNRIPETADLLKTEIALAPEAERN
AVLAAVPRAYARVSDKKLSSTVVQEGLDTYLNNPATAGAAWATVGRMRLAADDSNGALDAAKRGQAADAHAEGPAMLALE
LMDPKLPEAEGLVRKYLEGNAKAQPEFRMAYARALLDAQRYAEAATQLQAVTREKPDYPESWLVLGSLQLQDNQLAQAQA
SLQRYVTLAEQQAADTDRNRGLAQAYLSLSQVAEKRKDYAAAENWLNKIEDASELTAAQTRRASILASQGKLEEGRKLIR
QLPERSPGDARLKLNAEVGLLRDLKQYRLAHDVLAEALSKTPDEPELLYDQAMMAEKLASLGEMERLLRQVIQLKPDYHH
AYNALGYSLADRGVRLPEARDLIQKALGFAPTDPFIKDSLGWVEYRMGNKTEALRIFEAAYKAKPDAEIAAHYGEVLWSL
GQRERATAIWKEGLLLNPDNETLQETLKRLRVKL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 64827; Mature: 64827

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRLSRALGCLCLAAPMVLAQTQAPAPAAPAAPSGLAEAKAAQDAAPPASPLDSALFYQ
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
LLVGEITTQDGEPAAGFALMLDAARKTGEAQLYQRATDIALQSRSGDAALQAAQAWKQAQ
HHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PASREANRYVLQILIALNRIPETADLLKTEIALAPEAERNAVLAAVPRAYARVSDKKLSS
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TVVQEGLDTYLNNPATAGAAWATVGRMRLAADDSNGALDAAKRGQAADAHAEGPAMLALE
HHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEE
LMDPKLPEAEGLVRKYLEGNAKAQPEFRMAYARALLDAQRYAEAATQLQAVTREKPDYPE
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SWLVLGSLQLQDNQLAQAQASLQRYVTLAEQQAADTDRNRGLAQAYLSLSQVAEKRKDYA
CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHH
AAENWLNKIEDASELTAAQTRRASILASQGKLEEGRKLIRQLPERSPGDARLKLNAEVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCHHH
LRDLKQYRLAHDVLAEALSKTPDEPELLYDQAMMAEKLASLGEMERLLRQVIQLKPDYHH
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AYNALGYSLADRGVRLPEARDLIQKALGFAPTDPFIKDSLGWVEYRMGNKTEALRIFEAA
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCHHHEECCCCHHHHHHHHHH
YKAKPDAEIAAHYGEVLWSLGQRERATAIWKEGLLLNPDNETLQETLKRLRVKL
HHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKRLSRALGCLCLAAPMVLAQTQAPAPAAPAAPSGLAEAKAAQDAAPPASPLDSALFYQ
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
LLVGEITTQDGEPAAGFALMLDAARKTGEAQLYQRATDIALQSRSGDAALQAAQAWKQAQ
HHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PASREANRYVLQILIALNRIPETADLLKTEIALAPEAERNAVLAAVPRAYARVSDKKLSS
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TVVQEGLDTYLNNPATAGAAWATVGRMRLAADDSNGALDAAKRGQAADAHAEGPAMLALE
HHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEE
LMDPKLPEAEGLVRKYLEGNAKAQPEFRMAYARALLDAQRYAEAATQLQAVTREKPDYPE
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SWLVLGSLQLQDNQLAQAQASLQRYVTLAEQQAADTDRNRGLAQAYLSLSQVAEKRKDYA
CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHH
AAENWLNKIEDASELTAAQTRRASILASQGKLEEGRKLIRQLPERSPGDARLKLNAEVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCHHH
LRDLKQYRLAHDVLAEALSKTPDEPELLYDQAMMAEKLASLGEMERLLRQVIQLKPDYHH
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AYNALGYSLADRGVRLPEARDLIQKALGFAPTDPFIKDSLGWVEYRMGNKTEALRIFEAA
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCHHHEECCCCHHHHHHHHHH
YKAKPDAEIAAHYGEVLWSLGQRERATAIWKEGLLLNPDNETLQETLKRLRVKL
HHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]