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The map label for this gene is ycbG [H]

Identifier: 91787180

GI number: 91787180

Start: 1325428

End: 1326132

Strand: Reverse

Name: ycbG [H]

Synonym: Bpro_1284

Alternate gene names: 91787180

Gene position: 1326132-1325428 (Counterclockwise)

Preceding gene: 91787181

Following gene: 91787174

Centisome position: 25.5

GC content: 59.43

Gene sequence:

>705_bases
ATGACTGAAGACGCCGACGATCTGCTGGTCCGAATTATCGAGATCGCCGTGCGGACGCGGGCTGACAGCAGCGGCCGCGT
CCGTCTTCCGACCGAGCGCGAGCTTTCCGAATTGCTGCAGGTGCAACGCCCTACGGTGCGGGAGCGCCTGACCATTCTTG
AAACACTGGGTTTCGTGCAGCGTCGCCAGGGCAGCGGCACCTATCTCACACTGCCAAATTCGCAATTCCTGCAGTTCTAT
TTTGAAGTCGGCCTGAAACTGGGCTTCGTTTCAATCGATCAGATGCAAAAGGCCATGGAGATGATCGGCCTGGAAATGGT
CGGGAGCGCCGCCATCCACGCCAGCAGCGCAGATATCGATCTGCTGGAGCAGGCGGTCCAACAGTTGGCCGCGACCACCA
GTGTCAATGAATTTGTCGATGGCCAATTCGAGTTTCACGCCGGACTGGCACGTGCTTGCCACAATCCCGTCATCAGCCTG
CTGATCGATGGACTGGCGCGGGTAATTCGGGCGGTGCTATTGAGCCGGGTACGGGTGCTATCGATGGTGCGGGGCGCCTT
TGACCGCAATGTGGACGCTTACTCATCGGTGGTGCAGTCATTGCGTGACCGGGAGCCCGAAATGGCGCGCATTGCGCTCC
AGGAGTGCTACGCGCTGTGGCGGCGCGAAGCTTCGAAAATATCGATGCTGGACCTGACCGAGTGA

Upstream 100 bases:

>100_bases
AGCGCGCTGCTATGCTCTAATCCGCCTCCATCGAGGATCGCGAATTGCCGGAACGCGCGCGCCTGGCCCTGTTTTTTCAC
CGACCGCATGCACCAAACTC

Downstream 100 bases:

>100_bases
GCCGCGGCGGTTGGCCCGGTCACCCAGGAGTTGCCATGCCAGCCAAAAATCTCAAGTCGCCTTCGCGGCCACCTGCAGGC
GCTGGTACTTTTGCCAGAGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTEDADDLLVRIIEIAVRTRADSSGRVRLPTERELSELLQVQRPTVRERLTILETLGFVQRRQGSGTYLTLPNSQFLQFY
FEVGLKLGFVSIDQMQKAMEMIGLEMVGSAAIHASSADIDLLEQAVQQLAATTSVNEFVDGQFEFHAGLARACHNPVISL
LIDGLARVIRAVLLSRVRVLSMVRGAFDRNVDAYSSVVQSLRDREPEMARIALQECYALWRREASKISMLDLTE

Sequences:

>Translated_234_residues
MTEDADDLLVRIIEIAVRTRADSSGRVRLPTERELSELLQVQRPTVRERLTILETLGFVQRRQGSGTYLTLPNSQFLQFY
FEVGLKLGFVSIDQMQKAMEMIGLEMVGSAAIHASSADIDLLEQAVQQLAATTSVNEFVDGQFEFHAGLARACHNPVISL
LIDGLARVIRAVLLSRVRVLSMVRGAFDRNVDAYSSVVQSLRDREPEMARIALQECYALWRREASKISMLDLTE
>Mature_233_residues
TEDADDLLVRIIEIAVRTRADSSGRVRLPTERELSELLQVQRPTVRERLTILETLGFVQRRQGSGTYLTLPNSQFLQFYF
EVGLKLGFVSIDQMQKAMEMIGLEMVGSAAIHASSADIDLLEQAVQQLAATTSVNEFVDGQFEFHAGLARACHNPVISLL
IDGLARVIRAVLLSRVRVLSMVRGAFDRNVDAYSSVVQSLRDREPEMARIALQECYALWRREASKISMLDLTE

Specific function: Repressor For The Uxurba Operon. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26258; Mature: 26126

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEDADDLLVRIIEIAVRTRADSSGRVRLPTERELSELLQVQRPTVRERLTILETLGFVQ
CCCCHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RRQGSGTYLTLPNSQFLQFYFEVGLKLGFVSIDQMQKAMEMIGLEMVGSAAIHASSADID
HCCCCCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LLEQAVQQLAATTSVNEFVDGQFEFHAGLARACHNPVISLLIDGLARVIRAVLLSRVRVL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMVRGAFDRNVDAYSSVVQSLRDREPEMARIALQECYALWRREASKISMLDLTE
HHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TEDADDLLVRIIEIAVRTRADSSGRVRLPTERELSELLQVQRPTVRERLTILETLGFVQ
CCCHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RRQGSGTYLTLPNSQFLQFYFEVGLKLGFVSIDQMQKAMEMIGLEMVGSAAIHASSADID
HCCCCCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LLEQAVQQLAATTSVNEFVDGQFEFHAGLARACHNPVISLLIDGLARVIRAVLLSRVRVL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMVRGAFDRNVDAYSSVVQSLRDREPEMARIALQECYALWRREASKISMLDLTE
HHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]