| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787167
Identifier: 91787167
GI number: 91787167
Start: 1313946
End: 1314917
Strand: Reverse
Name: 91787167
Synonym: Bpro_1270
Alternate gene names: NA
Gene position: 1314917-1313946 (Counterclockwise)
Preceding gene: 91787168
Following gene: 91787166
Centisome position: 25.29
GC content: 64.92
Gene sequence:
>972_bases ATGAAACGACGCACCCTGCTGCAGGCAGCCCCGGCCCTGATTTACGCCCCCGGCCTGGCCTTCGCCCAGGCGGCCTACCC GGCCAAACCCATCCGCTACATCGTGCCGGTTGCCGCCGGTGGTGGCAGCGACATGGTGGGCCGCACCGTGACCGAACGCT GGGGCATCCAGCTCAAGCAGAGTTTCATCGTGGACAACCAGGGCGGCGGCGGCGGCGTGATTGCAGCCCAGGCCACGGCC CGCGCGGCGCCCGATGGCTACACGCTGATGCAAGGCTATGTGGCGACGCATGGCACCAGCCCCGCGACGCGCAGGCTGCC TTATGACGCGGTGAAGGATTTCACGGCCATTGGCATGATTGGCGCCACGCCCAATGTGCTGGTTGTGAATGCCGCCCTGC CCGTCACCACGGTCAAGGAATTCATCGAGTACGTGCGCAAAAACCCTGGCAAGGTGAGCTACGGCTCGGCCGGCCAGGGC TCGCTCACGCACCTGACCATGGAACTCTTCAAGCAGCAGATCAACTCCTTCATGGTGCACATTCCCTACCGCGGCGTGGC GCCGGCTTTCACTGATCTTATCGGCGGGCAGACGCAGGCCATGTTCCCCGGGCTGGCGGCTGCAGTTCCGCATATCCGCT CCGGCCGGGTACGCCCGCTCGCGGTGACCGGCCTGACGCGGCACCCGCAATTCAAGGACTTGCCGACACTGGATGAGTCG GGCTTCAAGGGCTTTGATGCGCAGCAATGGTACGGCGTGGTTGGCCCGGCCGGCATGCCTGCACCCATCGTGAAGCAGCT CAACGAATCGCTGGCCACCGTGCTCAAGGCACCCGACCTGCGCGAGAAGCTTGCCGTCGAAGCGATTGAACCCATGGTGA TGTCGCCCGAGCAGTTTGCCGCCTTCATCAAGGCCGACATCGTGCGCTGGACCAAGCTGGCCAAAGACCGCAAGATCGAG CTGGACAGCTGA
Upstream 100 bases:
>100_bases CCGAATCAACGAATCACGCCCGAACAAACGCGGCCCCAAGACTGGTCCAAACCAGCAGCGGCACCCCCTTGATTTTTCAT TGCAATCCGGAGACAAACCC
Downstream 100 bases:
>100_bases TCCCCGGAAGTCATAAAACACGGCCTGCAGCCCGTATTTTCTGGCGCAGGCTGCTATTTATTTAATAGCTTATTGTCACT CTCATTAACCCCGCTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKRRTLLQAAPALIYAPGLAFAQAAYPAKPIRYIVPVAAGGGSDMVGRTVTERWGIQLKQSFIVDNQGGGGGVIAAQATA RAAPDGYTLMQGYVATHGTSPATRRLPYDAVKDFTAIGMIGATPNVLVVNAALPVTTVKEFIEYVRKNPGKVSYGSAGQG SLTHLTMELFKQQINSFMVHIPYRGVAPAFTDLIGGQTQAMFPGLAAAVPHIRSGRVRPLAVTGLTRHPQFKDLPTLDES GFKGFDAQQWYGVVGPAGMPAPIVKQLNESLATVLKAPDLREKLAVEAIEPMVMSPEQFAAFIKADIVRWTKLAKDRKIE LDS
Sequences:
>Translated_323_residues MKRRTLLQAAPALIYAPGLAFAQAAYPAKPIRYIVPVAAGGGSDMVGRTVTERWGIQLKQSFIVDNQGGGGGVIAAQATA RAAPDGYTLMQGYVATHGTSPATRRLPYDAVKDFTAIGMIGATPNVLVVNAALPVTTVKEFIEYVRKNPGKVSYGSAGQG SLTHLTMELFKQQINSFMVHIPYRGVAPAFTDLIGGQTQAMFPGLAAAVPHIRSGRVRPLAVTGLTRHPQFKDLPTLDES GFKGFDAQQWYGVVGPAGMPAPIVKQLNESLATVLKAPDLREKLAVEAIEPMVMSPEQFAAFIKADIVRWTKLAKDRKIE LDS >Mature_323_residues MKRRTLLQAAPALIYAPGLAFAQAAYPAKPIRYIVPVAAGGGSDMVGRTVTERWGIQLKQSFIVDNQGGGGGVIAAQATA RAAPDGYTLMQGYVATHGTSPATRRLPYDAVKDFTAIGMIGATPNVLVVNAALPVTTVKEFIEYVRKNPGKVSYGSAGQG SLTHLTMELFKQQINSFMVHIPYRGVAPAFTDLIGGQTQAMFPGLAAAVPHIRSGRVRPLAVTGLTRHPQFKDLPTLDES GFKGFDAQQWYGVVGPAGMPAPIVKQLNESLATVLKAPDLREKLAVEAIEPMVMSPEQFAAFIKADIVRWTKLAKDRKIE LDS
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34600; Mature: 34600
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRTLLQAAPALIYAPGLAFAQAAYPAKPIRYIVPVAAGGGSDMVGRTVTERWGIQLKQ CCCHHHHHHCCHHEEECCHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCEEEE SFIVDNQGGGGGVIAAQATARAAPDGYTLMQGYVATHGTSPATRRLPYDAVKDFTAIGMI EEEEECCCCCCCEEEECCHHCCCCCCHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHEEE GATPNVLVVNAALPVTTVKEFIEYVRKNPGKVSYGSAGQGSLTHLTMELFKQQINSFMVH CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHEEEE IPYRGVAPAFTDLIGGQTQAMFPGLAAAVPHIRSGRVRPLAVTGLTRHPQFKDLPTLDES CCCCCCCHHHHHHHCCCCHHHCCCHHHHCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCC GFKGFDAQQWYGVVGPAGMPAPIVKQLNESLATVLKAPDLREKLAVEAIEPMVMSPEQFA CCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHH AFIKADIVRWTKLAKDRKIELDS HHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKRRTLLQAAPALIYAPGLAFAQAAYPAKPIRYIVPVAAGGGSDMVGRTVTERWGIQLKQ CCCHHHHHHCCHHEEECCHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCEEEE SFIVDNQGGGGGVIAAQATARAAPDGYTLMQGYVATHGTSPATRRLPYDAVKDFTAIGMI EEEEECCCCCCCEEEECCHHCCCCCCHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHEEE GATPNVLVVNAALPVTTVKEFIEYVRKNPGKVSYGSAGQGSLTHLTMELFKQQINSFMVH CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHEEEE IPYRGVAPAFTDLIGGQTQAMFPGLAAAVPHIRSGRVRPLAVTGLTRHPQFKDLPTLDES CCCCCCCHHHHHHHCCCCHHHCCCHHHHCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCC GFKGFDAQQWYGVVGPAGMPAPIVKQLNESLATVLKAPDLREKLAVEAIEPMVMSPEQFA CCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHH AFIKADIVRWTKLAKDRKIELDS HHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]