Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yfhK [H]

Identifier: 91787017

GI number: 91787017

Start: 1155747

End: 1157168

Strand: Reverse

Name: yfhK [H]

Synonym: Bpro_1119

Alternate gene names: 91787017

Gene position: 1157168-1155747 (Counterclockwise)

Preceding gene: 91787018

Following gene: 91787016

Centisome position: 22.25

GC content: 65.61

Gene sequence:

>1422_bases
ATGCTGCAGCGATTTTCGTTTCGGCAACTGCTTGTCATCGCGTTCCTGCTGATCGCCGCCTTGCTGGGCGCCGCGTCGCT
GCGCGCGCTGTTTACCCTGGAAGATCTCACGCAGCAAAGCCGTGACAGCGCAGCCCGCGCGCTCGAACTGGGCAGCGCGG
CCCAGTCGCTGGGCGAGCGCAGCGTCTCGATGGAACGCACCTCCAGGCAATCGGTGGTACTGGACGATCGGGTGCTCCGC
GAGCGCTTCGATGACGAGGTCCGCGAGTCGACAGCTGTGCTGGACAGCCTGGTGAGAAATGGCATTCCGGCGGTCAAGGC
ACGGCAGTGGCGCGCCCACCTGCAGACCATCGCCAGCCTGATGTCTGGACCGCCGGCAACCGCGCTGGACCGCGAGCGCC
AGCTGGCGCAGGAGTTTCGCGAGCTGGAGGGGGTCAATGCAACGATCGCGATGCAGGTGCAGCAGGCCATACAGCAGCGC
AACAAATTACTGGAAGGCCGACTGGAAGCCAGCCGCCAACGCCTGGCGCAGCAAGTGGGCTGGGCCATCGCCCTGGCGGT
GGTCATGGCGCTGGCTTTTGGCATCTGGTTCACGCTGCCGCTGAAACGCCTGGAGCATGCCATTGTGGGCCTCGGTGAAA
ACCGGCTGGACCAGGTGATTGCGATCCAGGGGCCGGCAGACCTGGCCCTGGTGGGTCAGCGGCTGAACTGGCTGCGGCTG
CGGCTGGTCGAGCTGGATGCCGACAAGTCCCGCTTTTTACGCCACATCTCGCACGAGCTCAAGACGCCGCTGGCCTCCCT
GCGTGAAGGGGTGTCGCTGCTGGAAGACGGCGTCGCCGGTCCCTTGAGCGATGACCAGCGCGAGATTGCCCAAATCCTGA
AGCACAACACCGGCGTGCTGCAGGGACAGATCGAGGATTTGCTGCGCTTCAACACGGCAGCGTTCGAAGCGCGCCAGTTG
CGCAGGCAGACGTTGGACCTGCTGCAGCTCATGGAGGAGCAGGTCGACGCGCAGCGCCTGCAATGGCGCGCGCGGGAACT
GTCGGTGGCCGTCGTGGGTGAGCCGCTCCGGATGGAGCTGGACCCCGAGAAAATCGGGACTGCGCTGGCCAACCTGCTGT
CCAACGCCATCCGCTACTCACCGCCCAGGGGCATGATCCGCCTGGAGCTGGTGGCGCTGCCGGGCCGGGTCCGCATCGAT
ATTCACGACCAGGGCATCGGCGTCGCTGCGGCCGACCGCGAGCGGATTTTCGAGCCCTTCTTTCGCGGCGAGCGGCAACC
CGCCGACGTGGTACGCGGCAGCGGAATTGGCCTGTCCATCGTGCACGAATACATCGCGGCGCACGGCGGGCGCCTCGAAC
TGCTGCCAGACCAACCTGGTGCACACTTGCGGATTGAGCTTCCCCATGTTTCCAAATCCTGA

Upstream 100 bases:

>100_bases
CATCACACAGGCGACACAGCGCTCGCTGCGCGGCGAAGTCCTGACGCGGGACGTCGCCGTGCAGGCCTGAGGCAACGGGT
TGCGCCAATACACCACGCAC

Downstream 100 bases:

>100_bases
CTTTTCCACACGCCGCATCCACGCGGGCCTGCTGGCCCTGGCGGCTGCGGCTGCACTGGCGGCCTGCAGTACCGGCCCCT
CCCGGCAGGATGTCAGGCAA

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MLQRFSFRQLLVIAFLLIAALLGAASLRALFTLEDLTQQSRDSAARALELGSAAQSLGERSVSMERTSRQSVVLDDRVLR
ERFDDEVRESTAVLDSLVRNGIPAVKARQWRAHLQTIASLMSGPPATALDRERQLAQEFRELEGVNATIAMQVQQAIQQR
NKLLEGRLEASRQRLAQQVGWAIALAVVMALAFGIWFTLPLKRLEHAIVGLGENRLDQVIAIQGPADLALVGQRLNWLRL
RLVELDADKSRFLRHISHELKTPLASLREGVSLLEDGVAGPLSDDQREIAQILKHNTGVLQGQIEDLLRFNTAAFEARQL
RRQTLDLLQLMEEQVDAQRLQWRARELSVAVVGEPLRMELDPEKIGTALANLLSNAIRYSPPRGMIRLELVALPGRVRID
IHDQGIGVAAADRERIFEPFFRGERQPADVVRGSGIGLSIVHEYIAAHGGRLELLPDQPGAHLRIELPHVSKS

Sequences:

>Translated_473_residues
MLQRFSFRQLLVIAFLLIAALLGAASLRALFTLEDLTQQSRDSAARALELGSAAQSLGERSVSMERTSRQSVVLDDRVLR
ERFDDEVRESTAVLDSLVRNGIPAVKARQWRAHLQTIASLMSGPPATALDRERQLAQEFRELEGVNATIAMQVQQAIQQR
NKLLEGRLEASRQRLAQQVGWAIALAVVMALAFGIWFTLPLKRLEHAIVGLGENRLDQVIAIQGPADLALVGQRLNWLRL
RLVELDADKSRFLRHISHELKTPLASLREGVSLLEDGVAGPLSDDQREIAQILKHNTGVLQGQIEDLLRFNTAAFEARQL
RRQTLDLLQLMEEQVDAQRLQWRARELSVAVVGEPLRMELDPEKIGTALANLLSNAIRYSPPRGMIRLELVALPGRVRID
IHDQGIGVAAADRERIFEPFFRGERQPADVVRGSGIGLSIVHEYIAAHGGRLELLPDQPGAHLRIELPHVSKS
>Mature_473_residues
MLQRFSFRQLLVIAFLLIAALLGAASLRALFTLEDLTQQSRDSAARALELGSAAQSLGERSVSMERTSRQSVVLDDRVLR
ERFDDEVRESTAVLDSLVRNGIPAVKARQWRAHLQTIASLMSGPPATALDRERQLAQEFRELEGVNATIAMQVQQAIQQR
NKLLEGRLEASRQRLAQQVGWAIALAVVMALAFGIWFTLPLKRLEHAIVGLGENRLDQVIAIQGPADLALVGQRLNWLRL
RLVELDADKSRFLRHISHELKTPLASLREGVSLLEDGVAGPLSDDQREIAQILKHNTGVLQGQIEDLLRFNTAAFEARQL
RRQTLDLLQLMEEQVDAQRLQWRARELSVAVVGEPLRMELDPEKIGTALANLLSNAIRYSPPRGMIRLELVALPGRVRID
IHDQGIGVAAADRERIFEPFFRGERQPADVVRGSGIGLSIVHEYIAAHGGRLELLPDQPGAHLRIELPHVSKS

Specific function: Probable member of a two-component regulatory system yfhA/yfhK. May activate yfhA by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI87082128, Length=430, Percent_Identity=34.4186046511628, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1789808, Length=294, Percent_Identity=26.8707482993197, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1790346, Length=286, Percent_Identity=28.6713286713287, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1788393, Length=272, Percent_Identity=26.8382352941176, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1790861, Length=296, Percent_Identity=27.7027027027027, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786783, Length=297, Percent_Identity=25.2525252525253, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1787894, Length=275, Percent_Identity=26.9090909090909, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1786912, Length=228, Percent_Identity=28.9473684210526, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI145693157, Length=226, Percent_Identity=26.5486725663717, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786600, Length=213, Percent_Identity=24.4131455399061, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1790436, Length=216, Percent_Identity=24.0740740740741, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081816, Length=219, Percent_Identity=28.7671232876712, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788713, Length=259, Percent_Identity=25.4826254826255, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 52712; Mature: 52712

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQRFSFRQLLVIAFLLIAALLGAASLRALFTLEDLTQQSRDSAARALELGSAAQSLGER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVSMERTSRQSVVLDDRVLRERFDDEVRESTAVLDSLVRNGIPAVKARQWRAHLQTIASL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
MSGPPATALDRERQLAQEFRELEGVNATIAMQVQQAIQQRNKLLEGRLEASRQRLAQQVG
HCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAIALAVVMALAFGIWFTLPLKRLEHAIVGLGENRLDQVIAIQGPADLALVGQRLNWLRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHHHHH
RLVELDADKSRFLRHISHELKTPLASLREGVSLLEDGVAGPLSDDQREIAQILKHNTGVL
HHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCH
QGQIEDLLRFNTAAFEARQLRRQTLDLLQLMEEQVDAQRLQWRARELSVAVVGEPLRMEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEECC
DPEKIGTALANLLSNAIRYSPPRGMIRLELVALPGRVRIDIHDQGIGVAAADRERIFEPF
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCEEECCHHHHHHHH
FRGERQPADVVRGSGIGLSIVHEYIAAHGGRLELLPDQPGAHLRIELPHVSKS
HCCCCCCHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MLQRFSFRQLLVIAFLLIAALLGAASLRALFTLEDLTQQSRDSAARALELGSAAQSLGER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVSMERTSRQSVVLDDRVLRERFDDEVRESTAVLDSLVRNGIPAVKARQWRAHLQTIASL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
MSGPPATALDRERQLAQEFRELEGVNATIAMQVQQAIQQRNKLLEGRLEASRQRLAQQVG
HCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAIALAVVMALAFGIWFTLPLKRLEHAIVGLGENRLDQVIAIQGPADLALVGQRLNWLRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHHHHH
RLVELDADKSRFLRHISHELKTPLASLREGVSLLEDGVAGPLSDDQREIAQILKHNTGVL
HHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCH
QGQIEDLLRFNTAAFEARQLRRQTLDLLQLMEEQVDAQRLQWRARELSVAVVGEPLRMEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEECC
DPEKIGTALANLLSNAIRYSPPRGMIRLELVALPGRVRIDIHDQGIGVAAADRERIFEPF
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCEEECCHHHHHHHH
FRGERQPADVVRGSGIGLSIVHEYIAAHGGRLELLPDQPGAHLRIELPHVSKS
HCCCCCCHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]