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The map label for this gene is ypjD [C]

Identifier: 91787011

GI number: 91787011

Start: 1147504

End: 1148304

Strand: Reverse

Name: ypjD [C]

Synonym: Bpro_1113

Alternate gene names: 91787011

Gene position: 1148304-1147504 (Counterclockwise)

Preceding gene: 91787013

Following gene: 91787010

Centisome position: 22.08

GC content: 64.54

Gene sequence:

>801_bases
ATGATTTTAGCTTTCAGTGCGTGGTGGGGTCTTGGGGCGGCAATAGGCGCCGCTCTGGCCTATGCAACCCTGGCGCTGGC
CCCCCCCCGCCTGAGCCCGGCGACCATTCGCGGAATTTTGCTGGCGGCATGGCTGCTGCACGCGTTGGCTCTGGCCAACG
GACTGCTTGGAGATCCGCCGCGTTTTGGTTTTGCGCCCGCCCTTTCCATGACCGTCTGGCTGGTGCTCACCGTCTACGCG
ATTGAAAGCAGCCTGTTTCCGCAGCTCCAGGCCCACTGGGCACTGGCAGGACTGGGCAGCGCCGCGGTCATTTTGTCGCT
GCTTTTCCCCGGCACCAGCTACCACCGCATTGCCTCGCCCTGGCTGCCGCTGCACTGGGCGCTCGGCATTGCATCCTATG
GCCTGTTTGCGGCGGCAGTGGTGCATGGCTGGCTGATGAGCCGGTCGGAGCGCTCCATGCGCCAGGCCGCGCCAACCGAT
GCTGGTGTGCCGCTGCTCACGCTGGAACGCCTCACCTTTCGCTTCGTCGAAGCCGGTTTCGTGCTGCTGTCGGCAACACT
GCTGGTGGGCTGGTTGTTTGCCGAAACCCTGTACGGCCCGGGCATGGTCCGGATGTGGAACCACAAAACGATTTTCTCCG
TGCTGTCCTGGCTGACCTTTGCAGGGCTTCTGGCCGGCCGCGCCCGTCTGGGCTGGCGCGGCCGCAAGGCGGTTCGCGTG
CTGTACCTCGGCGCAGGCCTGCTGCTGCTGGGCTATGCAGGGTCGAGTTTTGTACTTGAAGTCATCCTGAGGCGTGCATG
A

Upstream 100 bases:

>100_bases
TGTCGGTAAGGGCTGAGGCCATGAGCAGGCTCCACAAACATGGAGCAATTAGGAAAGGAAAGAGGAGAGGAAAGAAAGCA
CTACGGGCTAAACTGTAGCC

Downstream 100 bases:

>100_bases
AATACCTGCTGGTCGCGGCCCTTGTGCTGGTGGTTTTCTGGCTCTGGCGCCACAACCGGCAGGCTGAAAAAAATGAAGCC
AACACGACTCGTCCGCCCAG

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MILAFSAWWGLGAAIGAALAYATLALAPPRLSPATIRGILLAAWLLHALALANGLLGDPPRFGFAPALSMTVWLVLTVYA
IESSLFPQLQAHWALAGLGSAAVILSLLFPGTSYHRIASPWLPLHWALGIASYGLFAAAVVHGWLMSRSERSMRQAAPTD
AGVPLLTLERLTFRFVEAGFVLLSATLLVGWLFAETLYGPGMVRMWNHKTIFSVLSWLTFAGLLAGRARLGWRGRKAVRV
LYLGAGLLLLGYAGSSFVLEVILRRA

Sequences:

>Translated_266_residues
MILAFSAWWGLGAAIGAALAYATLALAPPRLSPATIRGILLAAWLLHALALANGLLGDPPRFGFAPALSMTVWLVLTVYA
IESSLFPQLQAHWALAGLGSAAVILSLLFPGTSYHRIASPWLPLHWALGIASYGLFAAAVVHGWLMSRSERSMRQAAPTD
AGVPLLTLERLTFRFVEAGFVLLSATLLVGWLFAETLYGPGMVRMWNHKTIFSVLSWLTFAGLLAGRARLGWRGRKAVRV
LYLGAGLLLLGYAGSSFVLEVILRRA
>Mature_266_residues
MILAFSAWWGLGAAIGAALAYATLALAPPRLSPATIRGILLAAWLLHALALANGLLGDPPRFGFAPALSMTVWLVLTVYA
IESSLFPQLQAHWALAGLGSAAVILSLLFPGTSYHRIASPWLPLHWALGIASYGLFAAAVVHGWLMSRSERSMRQAAPTD
AGVPLLTLERLTFRFVEAGFVLLSATLLVGWLFAETLYGPGMVRMWNHKTIFSVLSWLTFAGLLAGRARLGWRGRKAVRV
LYLGAGLLLLGYAGSSFVLEVILRRA

Specific function: Unknown

COG id: COG4137

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 28632; Mature: 28632

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILAFSAWWGLGAAIGAALAYATLALAPPRLSPATIRGILLAAWLLHALALANGLLGDPP
CEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RFGFAPALSMTVWLVLTVYAIESSLFPQLQAHWALAGLGSAAVILSLLFPGTSYHRIASP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHCCC
WLPLHWALGIASYGLFAAAVVHGWLMSRSERSMRQAAPTDAGVPLLTLERLTFRFVEAGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
VLLSATLLVGWLFAETLYGPGMVRMWNHKTIFSVLSWLTFAGLLAGRARLGWRGRKAVRV
HHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LYLGAGLLLLGYAGSSFVLEVILRRA
HHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MILAFSAWWGLGAAIGAALAYATLALAPPRLSPATIRGILLAAWLLHALALANGLLGDPP
CEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RFGFAPALSMTVWLVLTVYAIESSLFPQLQAHWALAGLGSAAVILSLLFPGTSYHRIASP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHCCC
WLPLHWALGIASYGLFAAAVVHGWLMSRSERSMRQAAPTDAGVPLLTLERLTFRFVEAGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
VLLSATLLVGWLFAETLYGPGMVRMWNHKTIFSVLSWLTFAGLLAGRARLGWRGRKAVRV
HHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LYLGAGLLLLGYAGSSFVLEVILRRA
HHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7553451 [H]