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The map label for this gene is glcC [C]

Identifier: 91786929

GI number: 91786929

Start: 1056668

End: 1057381

Strand: Reverse

Name: glcC [C]

Synonym: Bpro_1030

Alternate gene names: 91786929

Gene position: 1057381-1056668 (Counterclockwise)

Preceding gene: 91786932

Following gene: 91786928

Centisome position: 20.33

GC content: 61.76

Gene sequence:

>714_bases
ATGGCTAAAAAATTCGAAATAGAGATGCCGAAGTCGCTGACGGAGATTGTTGCGCAGCGCGTGCGGCAGGCGATTATTGA
CGGAGAGTTTGCCTTGGGCCAGATGATTTCGGAAGAAACCCTGGCCGAATCGTTTGGCGTCAGCCGCACGCCCGTGCGTG
ACGCGCTGACGCTGCTGCAAACCACCGGGCTGGTGGACATCCGCTCCAAACGCGGCAGCTTTGTCTTCCAGCCCGACGAA
GATGACGTGCGCGCCATCTGCGACTTCCGCGCCACCCTGGAGCTACACGCCGCCAAGCGCTCCCGCGCCGTGAACCGGCA
GGCCGCCATTGCCGCGCTGGAAGCGGTTTTTGCGCAGATGGTGGCCGCCAGCGAAGCCGACGACGAGATCGGCTATGGCC
ACTGCGACTCGGCTTTTCACGAAGCGCTGTTCACGCATTGCGGCAACCCTTATGTGGTCAATGCCTACGCGCTCGTTTCT
GGCAAGATCGCCGCCCTGCGCACCAACATGGCCAAGCAGTTTTCCGATGCGCGCAAGGTGTCGCTGCAAGAGCACCGCGA
AATGATCCAGTACATCGACGACGGCGACTTTGACCGGCTGGAGCAACTGATCCAGAGCCATGTGGGCAGGACGGTCGAAG
CCTTTCGCCTGGCCAGTGCTGCGGCGCTGAAAGCCGCCCCCGCGCCTATCAAACTGAACGTCGCAGGCACCTGA

Upstream 100 bases:

>100_bases
CCCTCTCTTCATCTTGCATACAGAACCTTACGCTCAATAAAAATTACAATGCGGGGGTGCTGCGGCAATGTGACGCGCCT
TTTTCAGGATTCGAGGGTTC

Downstream 100 bases:

>100_bases
CCCGACTCTTTTAAAAACCACCATGACACCCGCCCAACAACTCCAGCAACTGCTCAAGACCGGCAACATCGTGATGGCGC
CGGGCGCACCCGATGCCATC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MAKKFEIEMPKSLTEIVAQRVRQAIIDGEFALGQMISEETLAESFGVSRTPVRDALTLLQTTGLVDIRSKRGSFVFQPDE
DDVRAICDFRATLELHAAKRSRAVNRQAAIAALEAVFAQMVAASEADDEIGYGHCDSAFHEALFTHCGNPYVVNAYALVS
GKIAALRTNMAKQFSDARKVSLQEHREMIQYIDDGDFDRLEQLIQSHVGRTVEAFRLASAAALKAAPAPIKLNVAGT

Sequences:

>Translated_237_residues
MAKKFEIEMPKSLTEIVAQRVRQAIIDGEFALGQMISEETLAESFGVSRTPVRDALTLLQTTGLVDIRSKRGSFVFQPDE
DDVRAICDFRATLELHAAKRSRAVNRQAAIAALEAVFAQMVAASEADDEIGYGHCDSAFHEALFTHCGNPYVVNAYALVS
GKIAALRTNMAKQFSDARKVSLQEHREMIQYIDDGDFDRLEQLIQSHVGRTVEAFRLASAAALKAAPAPIKLNVAGT
>Mature_236_residues
AKKFEIEMPKSLTEIVAQRVRQAIIDGEFALGQMISEETLAESFGVSRTPVRDALTLLQTTGLVDIRSKRGSFVFQPDED
DVRAICDFRATLELHAAKRSRAVNRQAAIAALEAVFAQMVAASEADDEIGYGHCDSAFHEALFTHCGNPYVVNAYALVSG
KIAALRTNMAKQFSDARKVSLQEHREMIQYIDDGDFDRLEQLIQSHVGRTVEAFRLASAAALKAAPAPIKLNVAGT

Specific function: Activator For The Glycolate Oxidation Locus. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789353, Length=162, Percent_Identity=29.0123456790123, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25971; Mature: 25840

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKFEIEMPKSLTEIVAQRVRQAIIDGEFALGQMISEETLAESFGVSRTPVRDALTLLQ
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
TTGLVDIRSKRGSFVFQPDEDDVRAICDFRATLELHAAKRSRAVNRQAAIAALEAVFAQM
HCCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAASEADDEIGYGHCDSAFHEALFTHCGNPYVVNAYALVSGKIAALRTNMAKQFSDARKV
HHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHCHHHHHHHHHHHHHHHHHHH
SLQEHREMIQYIDDGDFDRLEQLIQSHVGRTVEAFRLASAAALKAAPAPIKLNVAGT
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCC
>Mature Secondary Structure 
AKKFEIEMPKSLTEIVAQRVRQAIIDGEFALGQMISEETLAESFGVSRTPVRDALTLLQ
CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
TTGLVDIRSKRGSFVFQPDEDDVRAICDFRATLELHAAKRSRAVNRQAAIAALEAVFAQM
HCCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAASEADDEIGYGHCDSAFHEALFTHCGNPYVVNAYALVSGKIAALRTNMAKQFSDARKV
HHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHCHHHHHHHHHHHHHHHHHHH
SLQEHREMIQYIDDGDFDRLEQLIQSHVGRTVEAFRLASAAALKAAPAPIKLNVAGT
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8277241; 1612449 [H]