| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is sfsB [C]
Identifier: 91786897
GI number: 91786897
Start: 1013086
End: 1013463
Strand: Reverse
Name: sfsB [C]
Synonym: Bpro_0997
Alternate gene names: 91786897
Gene position: 1013463-1013086 (Counterclockwise)
Preceding gene: 91786900
Following gene: 91786896
Centisome position: 19.49
GC content: 57.14
Gene sequence:
>378_bases ATGGATATGCGCACAAATAAATCAACGCCGATACAAGAAGATATGCACCCCGCCGATGTCATTGCTGCTCTGCACAAGCG CGGCACCAGCCTTCGAAAAATAGCCCTTGAGAACGGCTACAGCCATATACAGCGCGTGCTGACCAGCCCCTGGTTGGCGG CCGAGCAATTGGTGGCGAAAGCACTTGATGCAAAGCCGGAAGATCTGTGGCCCTCGCGCTACCTGAATCCTGCTGACCGT GCTCTTGCCTTTCAGCAAACCCGCAAGATCACGGTGACCATGCCGCGCCAGCGCAAGCAAGCACCCCGCATCACGCACGA GCTGACTGTCGGCAACTTCGGCTCACTCAACGATGGCACTCCCCATTCCCAGTCATAG
Upstream 100 bases:
>100_bases CACAACCCATAAAAAACACCGCAAAATCATAAAAACACCAGCATCGAAACAAATTCTTCAGCAAAAATTTGTTGACTTCA TTTTGTTTGTGCTGAAAATA
Downstream 100 bases:
>100_bases AGGCTCGGCAAAACAACATCGCACATCACTAATTACCGCCAACCGCACCGGGCACTTCAGGGAAGAACCAGATGTCAACC ACGGGTGACCCCATCACTCC
Product: putative transcriptional regulator, Nlp
Products: NA
Alternate protein names: Regulator For Maltose Metabolism; Sugar Fermentation Stimulation Protein B; Transcriptional Regulatory Protein
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MDMRTNKSTPIQEDMHPADVIAALHKRGTSLRKIALENGYSHIQRVLTSPWLAAEQLVAKALDAKPEDLWPSRYLNPADR ALAFQQTRKITVTMPRQRKQAPRITHELTVGNFGSLNDGTPHSQS
Sequences:
>Translated_125_residues MDMRTNKSTPIQEDMHPADVIAALHKRGTSLRKIALENGYSHIQRVLTSPWLAAEQLVAKALDAKPEDLWPSRYLNPADR ALAFQQTRKITVTMPRQRKQAPRITHELTVGNFGSLNDGTPHSQS >Mature_125_residues MDMRTNKSTPIQEDMHPADVIAALHKRGTSLRKIALENGYSHIQRVLTSPWLAAEQLVAKALDAKPEDLWPSRYLNPADR ALAFQQTRKITVTMPRQRKQAPRITHELTVGNFGSLNDGTPHSQS
Specific function: This Protein Is Involved In Positive Regulation Of The Metabolism Of Sugars. [C]
COG id: COG3423
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789579, Length=66, Percent_Identity=45.4545454545455, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14051; Mature: 14051
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMRTNKSTPIQEDMHPADVIAALHKRGTSLRKIALENGYSHIQRVLTSPWLAAEQLVAK CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHH ALDAKPEDLWPSRYLNPADRALAFQQTRKITVTMPRQRKQAPRITHELTVGNFGSLNDGT HHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCHHHHCCCCCCEEECCCCCCCCCCCC PHSQS CCCCC >Mature Secondary Structure MDMRTNKSTPIQEDMHPADVIAALHKRGTSLRKIALENGYSHIQRVLTSPWLAAEQLVAK CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHH ALDAKPEDLWPSRYLNPADRALAFQQTRKITVTMPRQRKQAPRITHELTVGNFGSLNDGT HHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCHHHHCCCCCCEEECCCCCCCCCCCC PHSQS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA