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The map label for this gene is intB [H]

Identifier: 91786868

GI number: 91786868

Start: 986208

End: 987440

Strand: Reverse

Name: intB [H]

Synonym: Bpro_0966

Alternate gene names: 91786868

Gene position: 987440-986208 (Counterclockwise)

Preceding gene: 91786870

Following gene: 91786867

Centisome position: 18.99

GC content: 62.37

Gene sequence:

>1233_bases
ATGCCAAAAAAAGCGGTTGAACTGGGGGCCTTGCAGGTGAGTCGCTTGACTCAGCCTGGCCGCTATGCCGTGGGTGGTGT
GGCGGGCTTGCACCTCTGGGTTAAGCCGTCCGGTAACCGTTCCTGGATCCTGCGGGTGTTGGTCGGCGCCATCCGCAAAG
ACATCGGCTTGGGTGGATACCCCGATGTCACCCTGGCCGGGGCCCGGGATGCCGCCCGCCGCGCGCGCGACCAGATCCTG
CAGGGTGTCAACCCTATCGAGCAGCGCCGGCAAGCGAAGGCGCTGCTTATGGCCGACCAGGCCAAAGCCAAGACCTTCAA
GGACTGCAGCGCCGCCTTCATCGAGGATCGCGGCGACGAGTGGCGCAATCCAAAACACCGGCAGCAGTGGCACAACACCC
TTGAAACTTACGCCTTTCCATTCATTGGCGGCCTGTTCGTTAGGGACATTTCCCTGGCCCATGTCCTGGAGGTGTTGCGG
CCTATCTGGAAAACGAAGACCGAAACGGCCGCCCGGGTGCGGGGACGCATCGAAACGGTGCTCGATTGGGCGGCTGTGCG
TGGATACCGCGCCGGGGACAACCCCGCGCGCTGGAAGGGTCACTTGGATCAAGTGCTGCCCAAGCCATCCAAGGTAAAAA
AAGTGGAGCATCACAGCGCCGTAGGGCTGGATGACCTTGCCGGCTTCATTGCCGCCGTGCGTCGTGTCCCGGGCATGGGC
GCCCGGGCTCTGGAGTTCGCCATACTGACGGCCGCGCGGTCCGGTGAGGTGCGAGGGGCCCTGTGGTCCGAATTTGACCT
CAAGGCCGCGCAATGGATTGTGCCGCCCGAACGCATGAAGGCCGGCGAAGAGCATCGCGTGCCACTGTCAAAGCAGGCTA
TCAAACTGCTGAAATCAATCCCCCGTTTCGAGGGCTCGGACGTGGTTTTCTGCGGAATCAAAGGGCAGGTGCTGAGCGAC
ATGACCCTTTCTGCGGTCATGCGCCGCATGGAGGTCAACGCCGTCCCCCACGGGTTTCGGAGCACATTCCGGGATTGGGC
GTCCGAGCGGACAAATTTCCCGCGGGAGCTTGCCGAAAAGGCACTGGCGCACACCATCGAGTCAAAGGTGGAGGCGGCCT
ATCGTCGAGGCGACCTACTGGCCAAGCGCATGCAGATGATGCAGGCCTGGGCAGATTTCTGCGAAACGCCGGTGAACAAA
GGGACGGTGGTACCGCTCAAGCGAAAAGGATAA

Upstream 100 bases:

>100_bases
TCCCTCTGAAAATCAGCTTGTAGGGTTACGGCACCATCCATTGCAATCCAACACAATAGAGTTTATATTGTGGTAACTAA
TGTGGATTGGATACGGTTAG

Downstream 100 bases:

>100_bases
GCGCGAAGCCCTGGCGCGGTTTATCCAGGGCAAATAAGACGGGGCCAGTAGGTGCGCTAACACCATCCAACCCCTAACCA
AAACTGAAACGGAGCTTCAA

Product: phage integrase

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MPKKAVELGALQVSRLTQPGRYAVGGVAGLHLWVKPSGNRSWILRVLVGAIRKDIGLGGYPDVTLAGARDAARRARDQIL
QGVNPIEQRRQAKALLMADQAKAKTFKDCSAAFIEDRGDEWRNPKHRQQWHNTLETYAFPFIGGLFVRDISLAHVLEVLR
PIWKTKTETAARVRGRIETVLDWAAVRGYRAGDNPARWKGHLDQVLPKPSKVKKVEHHSAVGLDDLAGFIAAVRRVPGMG
ARALEFAILTAARSGEVRGALWSEFDLKAAQWIVPPERMKAGEEHRVPLSKQAIKLLKSIPRFEGSDVVFCGIKGQVLSD
MTLSAVMRRMEVNAVPHGFRSTFRDWASERTNFPRELAEKALAHTIESKVEAAYRRGDLLAKRMQMMQAWADFCETPVNK
GTVVPLKRKG

Sequences:

>Translated_410_residues
MPKKAVELGALQVSRLTQPGRYAVGGVAGLHLWVKPSGNRSWILRVLVGAIRKDIGLGGYPDVTLAGARDAARRARDQIL
QGVNPIEQRRQAKALLMADQAKAKTFKDCSAAFIEDRGDEWRNPKHRQQWHNTLETYAFPFIGGLFVRDISLAHVLEVLR
PIWKTKTETAARVRGRIETVLDWAAVRGYRAGDNPARWKGHLDQVLPKPSKVKKVEHHSAVGLDDLAGFIAAVRRVPGMG
ARALEFAILTAARSGEVRGALWSEFDLKAAQWIVPPERMKAGEEHRVPLSKQAIKLLKSIPRFEGSDVVFCGIKGQVLSD
MTLSAVMRRMEVNAVPHGFRSTFRDWASERTNFPRELAEKALAHTIESKVEAAYRRGDLLAKRMQMMQAWADFCETPVNK
GTVVPLKRKG
>Mature_409_residues
PKKAVELGALQVSRLTQPGRYAVGGVAGLHLWVKPSGNRSWILRVLVGAIRKDIGLGGYPDVTLAGARDAARRARDQILQ
GVNPIEQRRQAKALLMADQAKAKTFKDCSAAFIEDRGDEWRNPKHRQQWHNTLETYAFPFIGGLFVRDISLAHVLEVLRP
IWKTKTETAARVRGRIETVLDWAAVRGYRAGDNPARWKGHLDQVLPKPSKVKKVEHHSAVGLDDLAGFIAAVRRVPGMGA
RALEFAILTAARSGEVRGALWSEFDLKAAQWIVPPERMKAGEEHRVPLSKQAIKLLKSIPRFEGSDVVFCGIKGQVLSDM
TLSAVMRRMEVNAVPHGFRSTFRDWASERTNFPRELAEKALAHTIESKVEAAYRRGDLLAKRMQMMQAWADFCETPVNKG
TVVPLKRKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=384, Percent_Identity=28.6458333333333, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI1788974, Length=402, Percent_Identity=28.6069651741293, Blast_Score=125, Evalue=6e-30,
Organism=Escherichia coli, GI1788690, Length=379, Percent_Identity=27.4406332453826, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 45724; Mature: 45592

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKAVELGALQVSRLTQPGRYAVGGVAGLHLWVKPSGNRSWILRVLVGAIRKDIGLGGY
CCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCC
PDVTLAGARDAARRARDQILQGVNPIEQRRQAKALLMADQAKAKTFKDCSAAFIEDRGDE
CCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WRNPKHRQQWHNTLETYAFPFIGGLFVRDISLAHVLEVLRPIWKTKTETAARVRGRIETV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LDWAAVRGYRAGDNPARWKGHLDQVLPKPSKVKKVEHHSAVGLDDLAGFIAAVRRVPGMG
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
ARALEFAILTAARSGEVRGALWSEFDLKAAQWIVPPERMKAGEEHRVPLSKQAIKLLKSI
HHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHC
PRFEGSDVVFCGIKGQVLSDMTLSAVMRRMEVNAVPHGFRSTFRDWASERTNFPRELAEK
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH
ALAHTIESKVEAAYRRGDLLAKRMQMMQAWADFCETPVNKGTVVPLKRKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
>Mature Secondary Structure 
PKKAVELGALQVSRLTQPGRYAVGGVAGLHLWVKPSGNRSWILRVLVGAIRKDIGLGGY
CCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCC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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]