| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786811
Identifier: 91786811
GI number: 91786811
Start: 927556
End: 927765
Strand: Reverse
Name: 91786811
Synonym: Bpro_0909
Alternate gene names: NA
Gene position: 927765-927556 (Counterclockwise)
Preceding gene: 91786816
Following gene: 91786809
Centisome position: 17.84
GC content: 55.24
Gene sequence:
>210_bases ATGGGAGCACCAATGGAGCTAAAGACGGCACGACTGACGGTTCTGATTGATCCGGCAAAGAAACTGGCGTTCGAGGGCTT GTGTGCAAAACAGGACGTCACCCCCTCCCAAGTCGTACGCAGGCTCATTCGCGAGTACCTGGTCGAGCATGGCGTCGAAT TCACGCCGTCCGGGACTTCAAAATCAGCCAGAAGAAGGCACACATCTTGA
Upstream 100 bases:
>100_bases CATGGGTTGAATATAGGTTACATTCAATTCAATTGCAATTATAATTTCATTATCATATTATGCGATGAAATGAATACAGG AACATGAGGGGGACATGAAT
Downstream 100 bases:
>100_bases GGATCAGGGAGCAAGAGAGGTCCGCCCCAATTTCGCCTCGAAGACTGTCAGTTTTCCCCGGGCAGCGGCCGGGTTCCCTG GAACAATAGAAACGCTCTGA
Product: helix-turn-helix protein, CopG
Products: NA
Alternate protein names: CopG Family Protein; Transcriptional Regulator; CopG Family Transcriptional Regulator; CopG-Like Transcriptional Regulator; Thioredoxin
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MGAPMELKTARLTVLIDPAKKLAFEGLCAKQDVTPSQVVRRLIREYLVEHGVEFTPSGTSKSARRRHTS
Sequences:
>Translated_69_residues MGAPMELKTARLTVLIDPAKKLAFEGLCAKQDVTPSQVVRRLIREYLVEHGVEFTPSGTSKSARRRHTS >Mature_68_residues GAPMELKTARLTVLIDPAKKLAFEGLCAKQDVTPSQVVRRLIREYLVEHGVEFTPSGTSKSARRRHTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7680; Mature: 7549
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPMELKTARLTVLIDPAKKLAFEGLCAKQDVTPSQVVRRLIREYLVEHGVEFTPSGTS CCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC KSARRRHTS CCCCCCCCC >Mature Secondary Structure GAPMELKTARLTVLIDPAKKLAFEGLCAKQDVTPSQVVRRLIREYLVEHGVEFTPSGTS CCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC KSARRRHTS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA