| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is nreB [H]
Identifier: 91786612
GI number: 91786612
Start: 720561
End: 722222
Strand: Direct
Name: nreB [H]
Synonym: Bpro_0708
Alternate gene names: 91786612
Gene position: 720561-722222 (Clockwise)
Preceding gene: 91786611
Following gene: 91786613
Centisome position: 13.86
GC content: 64.26
Gene sequence:
>1662_bases ATGGAACAGGTGCCCACTTTTCTCCTCCGTTTGACGGGTGTCACCTTGTTGTATGCCGCCGCGGCAATAGGAGGGCTGAT GTATGCCGTTGTCGGCAGCACGGTCACGCTGGTCTGGGCGCCGAGCGGGATCGCGCTGGCTGCACTCCTGGCCTACGGCT ACCGCCTGTCTTTCGGCGTTGCGCTGGGCGCCTTTCTGGCGAATGCCTGGACCGGCATACCGCTTGCCGCCTCCGCAGTC ATCGCCATGGGGAACACTCTGGAGGCCTTGGTCGGCGCATTTCTCCTGGTTCGCCTGGTCCGCTTTCGCAATGCCCTGGA CCGACGTCGGGATGTATTCGCATTAATCGTGCTGGCCGCCATTTTCAGCACGATGTTGAGCGCTTCTGTGGGGGTGGCAA CCCTGGCCCTGGGCGGCATTGTGTCCTTTGGAGAGTACGCCGCGGTGTGGTTGAAATGGTGGCTTGGGGACATGATGGGC GTGCTGGTGGTAACCCCGCCACTGCTGCTCTGGCTCAGCCATTCCCGCCCTGTCCTGTCACCCCTGAAAGCCGTCGAGGC CTTGTGTCTGGTCGCGGCACTCGTGCTTGTCAGCCACAAAATCTTTGGTGCGCCGGAATTGGCAGGCCATGGCTACTATC CGGCCTCACTTGCCGTGTTCCCTTTCGTCATTTGGGGGGCGCTGCGCTTTGGTCGATGGGGCGCCAGCCTGGTCACGCTG GTTGTCTCCGTGCTGGCCATTTGGGGCACCACACAAGGAACAGGGCCATTCGTGGTCGATCAGCCCGTGGACAGCCTGGT GCGCTGGTGCGCGTTCGCGATTGTCGTGGCGGTGACCGGCCTCCTGCTGGCCGCATCCGTGGCCGAACAGCGGCGCGCGC AGGCGGATCTCAAAAGCTCGCACGACGGCCTGGAGCAACGCGTGAAGGAGCGCACCCAGGCTATCGCCGACATCAACGCC GATCTGCGGCGGGAAATGGCGGCGCGTCGGCGCCTGGAGAAAGCGCTGATCCGGGTCAGCGAAGAACAGCAGCAAGCCAT CGGCCGGGAATTGCACGATGGCCTGGGTCAACACCTGACCGGCCTCGCCCTCTTCAGTGCGACCTTGCAGCAAAAGCTCC ACGAGCGCGCGCAACCGGAGGCCGAAGCCGCGCGTCGGATCGTCGAGTTGGTCAATCAGGCGACAGCCATGACCCGCTCC GTGGCCAGGGGCCTCTACCCGGCGGCACTGGAGGTCGGCGGCCTGTCCGCCGCGCTGGAGCAGCTGGCGGAGTACACCCG CTCGCTGCAAGGCATGGCCTGCGTTTTCCGCTGCGGTGCGGACGTGCAGGTGCGCGACCCGCTGGTCGCCATCAACCTGT ACCGGGTCGCCCAGGAAGCCGTCAATAATGCGGTGAAATACAGCCAGGCCAACCATTTGCGGATAGACCTGACCCGCGTC GAGGACAGGCACCGGCTCGCCATCAGCGATGACGGCATCGGTGCCGACCCCGAGCGCATCTGGCATGGCCAGGGCTTGGG AATGCACAGCATGCGTTATCGGGCGAGCCTGCTCGGCGGTACCTTTGCCATCGAGAGAAATGCCCACAGAGGCACCACCG TCGCCGTCATGTATCCGGACCAGGGGGAACAGAATGAACAACAACGACAACACGGCTCGTAG
Upstream 100 bases:
>100_bases CAACCGCCCTCGCGGCCTAGCCGATGCGGAATATCTCAAGCTGAAATTTATCAACTCGGTACCTCGGCTTGAACCAGCCC GGATCGCTTCATGGAGAACA
Downstream 100 bases:
>100_bases GCAGGAGAAGACCCGAATCATGATGGTGGACGACCATCCCCTCGTGCGGGAGGGCATGGCCCGGTTTCTCAATCTGCAGG GGGATCTCGATCTGTGCTGC
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Nitrogen regulation protein B [H]
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MEQVPTFLLRLTGVTLLYAAAAIGGLMYAVVGSTVTLVWAPSGIALAALLAYGYRLSFGVALGAFLANAWTGIPLAASAV IAMGNTLEALVGAFLLVRLVRFRNALDRRRDVFALIVLAAIFSTMLSASVGVATLALGGIVSFGEYAAVWLKWWLGDMMG VLVVTPPLLLWLSHSRPVLSPLKAVEALCLVAALVLVSHKIFGAPELAGHGYYPASLAVFPFVIWGALRFGRWGASLVTL VVSVLAIWGTTQGTGPFVVDQPVDSLVRWCAFAIVVAVTGLLLAASVAEQRRAQADLKSSHDGLEQRVKERTQAIADINA DLRREMAARRRLEKALIRVSEEQQQAIGRELHDGLGQHLTGLALFSATLQQKLHERAQPEAEAARRIVELVNQATAMTRS VARGLYPAALEVGGLSAALEQLAEYTRSLQGMACVFRCGADVQVRDPLVAINLYRVAQEAVNNAVKYSQANHLRIDLTRV EDRHRLAISDDGIGADPERIWHGQGLGMHSMRYRASLLGGTFAIERNAHRGTTVAVMYPDQGEQNEQQRQHGS
Sequences:
>Translated_553_residues MEQVPTFLLRLTGVTLLYAAAAIGGLMYAVVGSTVTLVWAPSGIALAALLAYGYRLSFGVALGAFLANAWTGIPLAASAV IAMGNTLEALVGAFLLVRLVRFRNALDRRRDVFALIVLAAIFSTMLSASVGVATLALGGIVSFGEYAAVWLKWWLGDMMG VLVVTPPLLLWLSHSRPVLSPLKAVEALCLVAALVLVSHKIFGAPELAGHGYYPASLAVFPFVIWGALRFGRWGASLVTL VVSVLAIWGTTQGTGPFVVDQPVDSLVRWCAFAIVVAVTGLLLAASVAEQRRAQADLKSSHDGLEQRVKERTQAIADINA DLRREMAARRRLEKALIRVSEEQQQAIGRELHDGLGQHLTGLALFSATLQQKLHERAQPEAEAARRIVELVNQATAMTRS VARGLYPAALEVGGLSAALEQLAEYTRSLQGMACVFRCGADVQVRDPLVAINLYRVAQEAVNNAVKYSQANHLRIDLTRV EDRHRLAISDDGIGADPERIWHGQGLGMHSMRYRASLLGGTFAIERNAHRGTTVAVMYPDQGEQNEQQRQHGS >Mature_553_residues MEQVPTFLLRLTGVTLLYAAAAIGGLMYAVVGSTVTLVWAPSGIALAALLAYGYRLSFGVALGAFLANAWTGIPLAASAV IAMGNTLEALVGAFLLVRLVRFRNALDRRRDVFALIVLAAIFSTMLSASVGVATLALGGIVSFGEYAAVWLKWWLGDMMG VLVVTPPLLLWLSHSRPVLSPLKAVEALCLVAALVLVSHKIFGAPELAGHGYYPASLAVFPFVIWGALRFGRWGASLVTL VVSVLAIWGTTQGTGPFVVDQPVDSLVRWCAFAIVVAVTGLLLAASVAEQRRAQADLKSSHDGLEQRVKERTQAIADINA DLRREMAARRRLEKALIRVSEEQQQAIGRELHDGLGQHLTGLALFSATLQQKLHERAQPEAEAARRIVELVNQATAMTRS VARGLYPAALEVGGLSAALEQLAEYTRSLQGMACVFRCGADVQVRDPLVAINLYRVAQEAVNNAVKYSQANHLRIDLTRV EDRHRLAISDDGIGADPERIWHGQGLGMHSMRYRASLLGGTFAIERNAHRGTTVAVMYPDQGEQNEQQRQHGS
Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. NreB functions as a direct oxygen sensor histidine kinase which is autophosphorylated, in the absence of oxyg
COG id: COG3851
COG function: function code T; Signal transduction histidine kinase, glucose-6-phosphate specific
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=241, Percent_Identity=26.5560165975104, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1787474, Length=216, Percent_Identity=30.5555555555556, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788812, Length=211, Percent_Identity=27.9620853080569, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR011712 - InterPro: IPR005467 - InterPro: IPR017203 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 59703; Mature: 59703
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQVPTFLLRLTGVTLLYAAAAIGGLMYAVVGSTVTLVWAPSGIALAALLAYGYRLSFGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH ALGAFLANAWTGIPLAASAVIAMGNTLEALVGAFLLVRLVRFRNALDRRRDVFALIVLAA HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFSTMLSASVGVATLALGGIVSFGEYAAVWLKWWLGDMMGVLVVTPPLLLWLSHSRPVLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH PLKAVEALCLVAALVLVSHKIFGAPELAGHGYYPASLAVFPFVIWGALRFGRWGASLVTL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH VVSVLAIWGTTQGTGPFVVDQPVDSLVRWCAFAIVVAVTGLLLAASVAEQRRAQADLKSS HHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HDGLEQRVKERTQAIADINADLRREMAARRRLEKALIRVSEEQQQAIGRELHDGLGQHLT HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLALFSATLQQKLHERAQPEAEAARRIVELVNQATAMTRSVARGLYPAALEVGGLSAALE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHH QLAEYTRSLQGMACVFRCGADVQVRDPLVAINLYRVAQEAVNNAVKYSQANHLRIDLTRV HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC EDRHRLAISDDGIGADPERIWHGQGLGMHSMRYRASLLGGTFAIERNAHRGTTVAVMYPD CCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCC QGEQNEQQRQHGS CCCCCHHHHHCCC >Mature Secondary Structure MEQVPTFLLRLTGVTLLYAAAAIGGLMYAVVGSTVTLVWAPSGIALAALLAYGYRLSFGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH ALGAFLANAWTGIPLAASAVIAMGNTLEALVGAFLLVRLVRFRNALDRRRDVFALIVLAA HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFSTMLSASVGVATLALGGIVSFGEYAAVWLKWWLGDMMGVLVVTPPLLLWLSHSRPVLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH PLKAVEALCLVAALVLVSHKIFGAPELAGHGYYPASLAVFPFVIWGALRFGRWGASLVTL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH VVSVLAIWGTTQGTGPFVVDQPVDSLVRWCAFAIVVAVTGLLLAASVAEQRRAQADLKSS HHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HDGLEQRVKERTQAIADINADLRREMAARRRLEKALIRVSEEQQQAIGRELHDGLGQHLT HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLALFSATLQQKLHERAQPEAEAARRIVELVNQATAMTRSVARGLYPAALEVGGLSAALE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHH QLAEYTRSLQGMACVFRCGADVQVRDPLVAINLYRVAQEAVNNAVKYSQANHLRIDLTRV HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC EDRHRLAISDDGIGADPERIWHGQGLGMHSMRYRASLLGGTFAIERNAHRGTTVAVMYPD CCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCC QGEQNEQQRQHGS CCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12426351 [H]