| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ycgS [C]
Identifier: 91786609
GI number: 91786609
Start: 717295
End: 717933
Strand: Direct
Name: ycgS [C]
Synonym: Bpro_0705
Alternate gene names: 91786609
Gene position: 717295-717933 (Clockwise)
Preceding gene: 91786608
Following gene: 91786610
Centisome position: 13.79
GC content: 64.79
Gene sequence:
>639_bases ATGAACACTCAAGACATCATCACGGCCGCCCGGGCGGTACATGCCGCCATCCTGACCAACGAGCAGCAGATCGAATCGCT GGATCGCGCCATCGGCGACGGCGACCACTTCATCAACGTACGGCGCGGCTGCGAAGCCATCGCCGCGATCACGCCCGAAC TGGTGCCGCTGTCGCCGGCACAGGCGTTCAACCGCATCGGCATGAAACTGCTCAGCACCATAGGCGGCGCCTCGGGGCCG CTGATCGGCAGCTTCTTCATCTCCATGGGCAGGGAGCTGGAAGGCTCGGTCGAGCCGGATGCGAAGCACTTCGCGCGCGC CCTGGCCGCAGGCGTCGAAGCCATCAAGAGCCGCGGCAAAGCCGACCTGGGTGAGAAGACGATGCTGGACGTGCTCATCC CCGCCTCGCGGCTGCTGCTGCGCCTGGCCGAGGAGGGATGCGACCAGGGCACGCTGTGTGCCCGCCTCAAGGAAGAAGCG GAGCTCAACATGCTGGCCACCCGCGACATGATTGCGACCAAAGGCCGAGCCCATTTCCTCGGTGAGCGCGCCCTGGGACA TATCGATCCTGGTGCGAAGACCAGTCAGGTCGCGCTGTTCGCTGTGTGTGACATGCTGACCATCGGAGCAGCATCATGA
Upstream 100 bases:
>100_bases CCGTATCCGCCTGTGTTTTCCGGCTGGCCAGCGCCTGCTGTTCGACCAGGCCGGAAAGCGGCTTGCAGCCTGAGACCCTA TTCCTGACGAGACCCACCCC
Downstream 100 bases:
>100_bases AAAAATTCGTCAACGATGTGGAGCAACTGCTGCAGGAGTCGCTGCAAGGAATGGCCGCCGCGCACAGCGACCTGCTGACC CTGCACCTGGATCCAACATT
Product: dihydroxyacetone kinase subunit L
Products: NA
Alternate protein names: ORFC [H]
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MNTQDIITAARAVHAAILTNEQQIESLDRAIGDGDHFINVRRGCEAIAAITPELVPLSPAQAFNRIGMKLLSTIGGASGP LIGSFFISMGRELEGSVEPDAKHFARALAAGVEAIKSRGKADLGEKTMLDVLIPASRLLLRLAEEGCDQGTLCARLKEEA ELNMLATRDMIATKGRAHFLGERALGHIDPGAKTSQVALFAVCDMLTIGAAS
Sequences:
>Translated_212_residues MNTQDIITAARAVHAAILTNEQQIESLDRAIGDGDHFINVRRGCEAIAAITPELVPLSPAQAFNRIGMKLLSTIGGASGP LIGSFFISMGRELEGSVEPDAKHFARALAAGVEAIKSRGKADLGEKTMLDVLIPASRLLLRLAEEGCDQGTLCARLKEEA ELNMLATRDMIATKGRAHFLGERALGHIDPGAKTSQVALFAVCDMLTIGAAS >Mature_212_residues MNTQDIITAARAVHAAILTNEQQIESLDRAIGDGDHFINVRRGCEAIAAITPELVPLSPAQAFNRIGMKLLSTIGGASGP LIGSFFISMGRELEGSVEPDAKHFARALAAGVEAIKSRGKADLGEKTMLDVLIPASRLLLRLAEEGCDQGTLCARLKEEA ELNMLATRDMIATKGRAHFLGERALGHIDPGAKTSQVALFAVCDMLTIGAAS
Specific function: Unknown
COG id: COG2376
COG function: function code G; Dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
Organism=Homo sapiens, GI20149621, Length=180, Percent_Identity=34.4444444444444, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1787449, Length=176, Percent_Identity=35.7954545454545, Blast_Score=110, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR012737 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: NA
Molecular weight: Translated: 22417; Mature: 22417
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQDIITAARAVHAAILTNEQQIESLDRAIGDGDHFINVRRGCEAIAAITPELVPLSPA CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHH QAFNRIGMKLLSTIGGASGPLIGSFFISMGRELEGSVEPDAKHFARALAAGVEAIKSRGK HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC ADLGEKTMLDVLIPASRLLLRLAEEGCDQGTLCARLKEEAELNMLATRDMIATKGRAHFL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GERALGHIDPGAKTSQVALFAVCDMLTIGAAS HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNTQDIITAARAVHAAILTNEQQIESLDRAIGDGDHFINVRRGCEAIAAITPELVPLSPA CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHH QAFNRIGMKLLSTIGGASGPLIGSFFISMGRELEGSVEPDAKHFARALAAGVEAIKSRGK HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC ADLGEKTMLDVLIPASRLLLRLAEEGCDQGTLCARLKEEAELNMLATRDMIATKGRAHFL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GERALGHIDPGAKTSQVALFAVCDMLTIGAAS HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7703858 [H]