| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786585
Identifier: 91786585
GI number: 91786585
Start: 694540
End: 695244
Strand: Reverse
Name: 91786585
Synonym: Bpro_0681
Alternate gene names: NA
Gene position: 695244-694540 (Counterclockwise)
Preceding gene: 91786589
Following gene: 91786584
Centisome position: 13.37
GC content: 57.87
Gene sequence:
>705_bases ATGAATGCTCACCAGACAGCCCAACGCGACAAATTGCTGAAATTTCTCGCCTCTTCTCCATGGCGCGAGGGACTTTCCCA AGATCAGTTTGATCGTGTCTGTGGCGACGCCGTGACGCGTACTTTCACGGCTGGGGCCACTATTTGCCTTCGCGAATCGC CCTCTGAGCACTGGCTGGCCGTCGTTGATGGCCTGGTCAAGGTTGACACGGTTTCTGCCGATGGCCGGGCGACGACGTTT GCCGGCGTTCCCGGCGGCGCTTGGTTCGGCGAAGGAGCAGTACTGAAAGGCGAACCACGCCCGTATGCCGTCGTGGCCAT TCGCGACAGCACTGTCGCTTTCGTGCCTCGGGCCACCTTTCTCTGGCTGCTGGACAACAGCCATTCGTTCAGCCGCTGGC TTATCGACCAACTGAACGCCCGTTTAGGCTACTACGTGGCGCTGGTCGAAGGCCTGCGCCTGGGGGATGTGAATACCCGG GTGGCGTACTGCCTGGCCGAACTCTTCAACCCACAGCTCTATCCGAACACGCAACTCCGCATAGACATTTCCCAGGAGGA GATTGGTCGACTTACCGGGATGGTAAGACAGACTGCCTACCGTGCTTTGCACGAACTTGAAAATGCCGGTTTGATAAGGG TGCAATACGGATCGATCGAGGTAGTGGACCTCGAAGGGTTGAAAAAATTTGCGCTCGGTGCGTGA
Upstream 100 bases:
>100_bases GCCGTCCTGCCGCTACCCGGCATCGGATGCTGCTTCGGGGAGATTGACGACCTTGGAAGCCGATCATTCATCGGTAAAAT TTTCGATCGGTGGTAACGAA
Downstream 100 bases:
>100_bases AAGCACAATGATTATGGGATGAGCGAATGCTGGTTCAGGGCATTCACGCGCCAATACATCATCAAGTTGCAGGGAATACA GTCGGCATGGGTTTCAGCAG
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator Anr; Cyclic-Nucleotide-Gated Cation Channel; CNMP Regulatory Protein; DnrE Protein; HTH Crp Family Transcriptional Regulator; GntR Family Transcriptional Regulator; CAMP-Dependent Transcriptional Regulator; Catabolite Gene Activator; Transcription Regulator; CAMP Receptor Protein; Transcriptional Regulator Crp Family
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MNAHQTAQRDKLLKFLASSPWREGLSQDQFDRVCGDAVTRTFTAGATICLRESPSEHWLAVVDGLVKVDTVSADGRATTF AGVPGGAWFGEGAVLKGEPRPYAVVAIRDSTVAFVPRATFLWLLDNSHSFSRWLIDQLNARLGYYVALVEGLRLGDVNTR VAYCLAELFNPQLYPNTQLRIDISQEEIGRLTGMVRQTAYRALHELENAGLIRVQYGSIEVVDLEGLKKFALGA
Sequences:
>Translated_234_residues MNAHQTAQRDKLLKFLASSPWREGLSQDQFDRVCGDAVTRTFTAGATICLRESPSEHWLAVVDGLVKVDTVSADGRATTF AGVPGGAWFGEGAVLKGEPRPYAVVAIRDSTVAFVPRATFLWLLDNSHSFSRWLIDQLNARLGYYVALVEGLRLGDVNTR VAYCLAELFNPQLYPNTQLRIDISQEEIGRLTGMVRQTAYRALHELENAGLIRVQYGSIEVVDLEGLKKFALGA >Mature_234_residues MNAHQTAQRDKLLKFLASSPWREGLSQDQFDRVCGDAVTRTFTAGATICLRESPSEHWLAVVDGLVKVDTVSADGRATTF AGVPGGAWFGEGAVLKGEPRPYAVVAIRDSTVAFVPRATFLWLLDNSHSFSRWLIDQLNARLGYYVALVEGLRLGDVNTR VAYCLAELFNPQLYPNTQLRIDISQEEIGRLTGMVRQTAYRALHELENAGLIRVQYGSIEVVDLEGLKKFALGA
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25830; Mature: 25830
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAHQTAQRDKLLKFLASSPWREGLSQDQFDRVCGDAVTRTFTAGATICLRESPSEHWLA CCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHH VVDGLVKVDTVSADGRATTFAGVPGGAWFGEGAVLKGEPRPYAVVAIRDSTVAFVPRATF HHHCHHEEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEEEECCEEEEECCEEE LWLLDNSHSFSRWLIDQLNARLGYYVALVEGLRLGDVNTRVAYCLAELFNPQLYPNTQLR EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHCCCCCCCCEEE IDISQEEIGRLTGMVRQTAYRALHELENAGLIRVQYGSIEVVDLEGLKKFALGA EEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCHHHHHCCC >Mature Secondary Structure MNAHQTAQRDKLLKFLASSPWREGLSQDQFDRVCGDAVTRTFTAGATICLRESPSEHWLA CCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHH VVDGLVKVDTVSADGRATTFAGVPGGAWFGEGAVLKGEPRPYAVVAIRDSTVAFVPRATF HHHCHHEEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEEEECCEEEEECCEEE LWLLDNSHSFSRWLIDQLNARLGYYVALVEGLRLGDVNTRVAYCLAELFNPQLYPNTQLR EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHCCCCCCCCEEE IDISQEEIGRLTGMVRQTAYRALHELENAGLIRVQYGSIEVVDLEGLKKFALGA EEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA