| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786581
Identifier: 91786581
GI number: 91786581
Start: 689901
End: 690731
Strand: Reverse
Name: 91786581
Synonym: Bpro_0677
Alternate gene names: NA
Gene position: 690731-689901 (Counterclockwise)
Preceding gene: 91786582
Following gene: 91786580
Centisome position: 13.28
GC content: 62.7
Gene sequence:
>831_bases ATGTCCGCCGCCTTTGGCCCGCCCGAACTCATCAAGCTCTATGTCGACTACGAGATGCGGGACCTCGGAAGCAAATTGGT CAACAGACTATTCAAAAAGGCTAATTTTGGTTATTATATTGACCAGATGAGCACTCCCGAAATCACCTCTGTCCTCGACC GACATCTGCTGCTGCAGCTGGGCGACCGGCTGCGGCGGTTGCGCAAAGCGCAGGGCCTGGGTACGGTTGAGATGGCCAAC CGTGTTGGGATCACAAGAAACACTCTTCGCAGCGTCGAGGCTGGAGATCCGGCCACGGCGATCGGGACCTACCTGCGGGT AATGTCGGTGCTGGGCGTCAGCGGCGAGCTGGCGCTGCTCGCAGGGGACACCCTGCTGCCACCGCCGGCGGGGTCTGCCG CGGCGCGATCGCGGCGCGAACCTCCGATCGTCCAGGTGAACGTGTCGGCGAAGGCCGGTCAGCACCGCCTGCAGGACCTG CAAAGCATAGCGCTCCACGAGGAAGCAGTGCGCCGGGTCAAGGCTGACCCCTCGCTGCTCCTTAAGGCGAAGGCAACGGT CGACCGCTGGCTTCAGGCCGGAGATCCCCGCTCGGCCAGCCTGTGGCGAGAGTGGCTGCAGATCCTGAACGCTGGAACCT GGAGAAAGGCGCTCGGCCGTACCCGACATGCCCAGCAGCTTCGGCAGGCCTCGCCGCTTGCCACCGTTCTGCCTGACGAT GTGCGCGGCGCTATCCTTGACCAGGTGAATGACCTACGGAATGGTGTTGTGCTCGGAGGAGCCGAGTCATCATTGCCTCA GAGCGAGTTGCACAAGAAGGGGACTCCATGA
Upstream 100 bases:
>100_bases GGCCAATTGATCGGTAGGAATAAGGTCTGTCGGATGATGCGTCCGGATTCTCAATGGTTTAGATAGCCCGTGGGTCGTGG TCGGACTCGAAGTACGCCGC
Downstream 100 bases:
>100_bases CGCGCGAAGAACTCGAACACATCATTCGCGCGGCCGCGGACATCACCGACTACTACGAGTTCATCATCATCGGCAGCCAG TCGATTCTCGGCGCGGTGCC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSAAFGPPELIKLYVDYEMRDLGSKLVNRLFKKANFGYYIDQMSTPEITSVLDRHLLLQLGDRLRRLRKAQGLGTVEMAN RVGITRNTLRSVEAGDPATAIGTYLRVMSVLGVSGELALLAGDTLLPPPAGSAAARSRREPPIVQVNVSAKAGQHRLQDL QSIALHEEAVRRVKADPSLLLKAKATVDRWLQAGDPRSASLWREWLQILNAGTWRKALGRTRHAQQLRQASPLATVLPDD VRGAILDQVNDLRNGVVLGGAESSLPQSELHKKGTP
Sequences:
>Translated_276_residues MSAAFGPPELIKLYVDYEMRDLGSKLVNRLFKKANFGYYIDQMSTPEITSVLDRHLLLQLGDRLRRLRKAQGLGTVEMAN RVGITRNTLRSVEAGDPATAIGTYLRVMSVLGVSGELALLAGDTLLPPPAGSAAARSRREPPIVQVNVSAKAGQHRLQDL QSIALHEEAVRRVKADPSLLLKAKATVDRWLQAGDPRSASLWREWLQILNAGTWRKALGRTRHAQQLRQASPLATVLPDD VRGAILDQVNDLRNGVVLGGAESSLPQSELHKKGTP >Mature_275_residues SAAFGPPELIKLYVDYEMRDLGSKLVNRLFKKANFGYYIDQMSTPEITSVLDRHLLLQLGDRLRRLRKAQGLGTVEMANR VGITRNTLRSVEAGDPATAIGTYLRVMSVLGVSGELALLAGDTLLPPPAGSAAARSRREPPIVQVNVSAKAGQHRLQDLQ SIALHEEAVRRVKADPSLLLKAKATVDRWLQAGDPRSASLWREWLQILNAGTWRKALGRTRHAQQLRQASPLATVLPDDV RGAILDQVNDLRNGVVLGGAESSLPQSELHKKGTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30197; Mature: 30066
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAFGPPELIKLYVDYEMRDLGSKLVNRLFKKANFGYYIDQMSTPEITSVLDRHLLLQL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHH GDRLRRLRKAQGLGTVEMANRVGITRNTLRSVEAGDPATAIGTYLRVMSVLGVSGELALL HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEE AGDTLLPPPAGSAAARSRREPPIVQVNVSAKAGQHRLQDLQSIALHEEAVRRVKADPSLL ECCCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LKAKATVDRWLQAGDPRSASLWREWLQILNAGTWRKALGRTRHAQQLRQASPLATVLPDD HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCHH VRGAILDQVNDLRNGVVLGGAESSLPQSELHKKGTP HHHHHHHHHHHHHCCEEECCCCCCCCHHHHHCCCCC >Mature Secondary Structure SAAFGPPELIKLYVDYEMRDLGSKLVNRLFKKANFGYYIDQMSTPEITSVLDRHLLLQL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHH GDRLRRLRKAQGLGTVEMANRVGITRNTLRSVEAGDPATAIGTYLRVMSVLGVSGELALL HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEE AGDTLLPPPAGSAAARSRREPPIVQVNVSAKAGQHRLQDLQSIALHEEAVRRVKADPSLL ECCCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LKAKATVDRWLQAGDPRSASLWREWLQILNAGTWRKALGRTRHAQQLRQASPLATVLPDD HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCHH VRGAILDQVNDLRNGVVLGGAESSLPQSELHKKGTP HHHHHHHHHHHHHCCEEECCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA