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The map label for this gene is yjgF [C]

Identifier: 91786560

GI number: 91786560

Start: 666170

End: 666562

Strand: Reverse

Name: yjgF [C]

Synonym: Bpro_0655

Alternate gene names: 91786560

Gene position: 666562-666170 (Counterclockwise)

Preceding gene: 91786569

Following gene: 91786557

Centisome position: 12.82

GC content: 61.58

Gene sequence:

>393_bases
ATGTCCGCACTTGAATACTTTGGCAACCCCCCGATGGCCTCCGACCACCAGCCGCGTCCGTTTTCACCCGCCGTGCGCGC
CGGGGACTTTGTTTATGTCTCGGGCCAGGTGCCGGCCGATGAAAAGGGCGAAATCGTGCAGGGCGGGATTGAGGTGCAGA
CGCGCCAGGTCATGAAAAACCTCTCTGCGGCCCTGGCGCTGGCCGGCTGCACGCTGGACGATGTCTGCAAGACCACGGTG
TGGCTGCAGGACGCACGTGACTTTGGCAGCTTCAACCGGGTCTACATGAGTTACTTCGGTGATAAAAAGCCGGCGCGCTC
TACGACCGAGGCGCGGTTGATGGTGGATGCGCGGGTGGAGATTGATGTGGTGGCTTACAAGCCGCGTGGATAG

Upstream 100 bases:

>100_bases
TTAAGCTGCATGACCTTGGGGCGCGGCGCCCTCCCCCCTTCGCACCAGTCTGGTGTTTTCTGCTGTTTACCCCTGTTCAC
CCTAACCAGGAGCTTTTCAC

Downstream 100 bases:

>100_bases
AACGCCTCGAGGGGCTTGGGGCTTTCGAGTGACAGCCCATTGGTCACCTGCCCCATCTGCTATTCAATTGGTAGCGAGTT
AGCTTCTCTGGGGCTGCTGA

Product: YjgF-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MSALEYFGNPPMASDHQPRPFSPAVRAGDFVYVSGQVPADEKGEIVQGGIEVQTRQVMKNLSAALALAGCTLDDVCKTTV
WLQDARDFGSFNRVYMSYFGDKKPARSTTEARLMVDARVEIDVVAYKPRG

Sequences:

>Translated_130_residues
MSALEYFGNPPMASDHQPRPFSPAVRAGDFVYVSGQVPADEKGEIVQGGIEVQTRQVMKNLSAALALAGCTLDDVCKTTV
WLQDARDFGSFNRVYMSYFGDKKPARSTTEARLMVDARVEIDVVAYKPRG
>Mature_129_residues
SALEYFGNPPMASDHQPRPFSPAVRAGDFVYVSGQVPADEKGEIVQGGIEVQTRQVMKNLSAALALAGCTLDDVCKTTVW
LQDARDFGSFNRVYMSYFGDKKPARSTTEARLMVDARVEIDVVAYKPRG

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=110, Percent_Identity=39.0909090909091, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI87082396, Length=123, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI87082213, Length=112, Percent_Identity=31.25, Blast_Score=67, Evalue=4e-13,
Organism=Escherichia coli, GI1787245, Length=118, Percent_Identity=30.5084745762712, Blast_Score=63, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71982075, Length=108, Percent_Identity=44.4444444444444, Blast_Score=80, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71982068, Length=108, Percent_Identity=44.4444444444444, Blast_Score=79, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI25148896, Length=108, Percent_Identity=44.4444444444444, Blast_Score=79, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6322138, Length=117, Percent_Identity=38.4615384615385, Blast_Score=87, Evalue=8e-19,
Organism=Saccharomyces cerevisiae, GI6320899, Length=83, Percent_Identity=34.9397590361446, Blast_Score=71, Evalue=5e-14,
Organism=Drosophila melanogaster, GI19921376, Length=108, Percent_Identity=41.6666666666667, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14279; Mature: 14148

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALEYFGNPPMASDHQPRPFSPAVRAGDFVYVSGQVPADEKGEIVQGGIEVQTRQVMKN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCHHHHHHHHH
LSAALALAGCTLDDVCKTTVWLQDARDFGSFNRVYMSYFGDKKPARSTTEARLMVDARVE
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECEEE
IDVVAYKPRG
EEEEEECCCC
>Mature Secondary Structure 
SALEYFGNPPMASDHQPRPFSPAVRAGDFVYVSGQVPADEKGEIVQGGIEVQTRQVMKN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCHHHHHHHHH
LSAALALAGCTLDDVCKTTVWLQDARDFGSFNRVYMSYFGDKKPARSTTEARLMVDARVE
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECEEE
IDVVAYKPRG
EEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]