Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786551

Identifier: 91786551

GI number: 91786551

Start: 655612

End: 656562

Strand: Direct

Name: 91786551

Synonym: Bpro_0646

Alternate gene names: NA

Gene position: 655612-656562 (Clockwise)

Preceding gene: 91786550

Following gene: 91786553

Centisome position: 12.61

GC content: 67.61

Gene sequence:

>951_bases
ATGAGCGTATCCGCGTTTCACGAGGGCGAGCGTGCGGTGCAGGCCCGGGTGGGCGTGCAGGAGCGGATGGCGCAGCTCGG
CCCGCGCGTCATCCGGGACTTCATGCCCGATCAGCACCGCGAGTTTTTTGGGCAGCTGCCTTTTGTGATTGCCGGCACGG
CGGACGCGTCCGGCCAGCCTTGGGCCTCGGTGCTCGCGGCACCACCCGGTTTCATTCACTCGCCCCATCCGCAGCGGCTG
GTGCTGCAGGCGCAGCCCCTGCCGGGCGATCCGCTGCAGGACACTTTGGCGGAAGGCGCGGCCATCGGCCTGCTGGGCAT
GGAGCCGCACACGCGGCGGCGCAACCGCATGAATGGGGTGGTGCAGGGCCTGGGTGCTGCGGGTTTTTCGGTGCAGGTGA
GCCAGAGCTTTGGCAACTGCCCCAAGTACATCCAGGCCCGTGAGCCGGTGTATGACGCGGGCCTTGCGCCTGTACCGCCC
GTGGTGCACCAGGCGGGCCAGCTCGACGATGCGGCGCGCGCCATGATCGCGGCGGCCGATACCCTCTTCATCGCGACGGC
CTATATGGGTGACGGTGACGACGCGGGGCGGGCCGGCGGGGTGGATGTGTCGCACCGCGGTGGCAAACCCGGCTTTGTGC
GGGTGGGCGCCGACGGCACGCTCACGGTGCCGGATTTCATGGGCAACTTTTTTTTCAACACGCTGGGCAATATTGCGGTC
AATCCGCGGGCCGGCCTGCTGTTCATCGACTTTGACAATGGCGACCTGCTCTATCTGGCCGTTACGGCAGACATCATCTG
GGACGGCCCTGAGGTGCAGGCCTTTGCCGAGGCGCAGCGCCTGCTGCGGTTCAAGGTGGGATCGATGCGCTTGGTGAAGG
GCTCATTGCCCCTGCGCTGGGGCGAGGCGGAGCTGTCGCCGGTGCTTGAGACCACGGGCACCTGGGCCTGA

Upstream 100 bases:

>100_bases
TTTCGCTGGAACCTTACCCCAGGCTGCGCGCCTGGCTGGCCCGCATCGAAGCCCTGCCGCGCTTTGTCCCCATGGTCAAA
ACGCCCACCGGGCTGGCAGC

Downstream 100 bases:

>100_bases
TCTGTAGCGTTGACACGAGCTCAGCCGATGGCTTCCAGCGCGAGCTCTCGCTCCAGCCATGCGCGAAATTTCTGCACAGC
CGGCCGATCCGCGCTGTGGG

Product: pyridoxamine 5'-phosphate oxidase-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSVSAFHEGERAVQARVGVQERMAQLGPRVIRDFMPDQHREFFGQLPFVIAGTADASGQPWASVLAAPPGFIHSPHPQRL
VLQAQPLPGDPLQDTLAEGAAIGLLGMEPHTRRRNRMNGVVQGLGAAGFSVQVSQSFGNCPKYIQAREPVYDAGLAPVPP
VVHQAGQLDDAARAMIAAADTLFIATAYMGDGDDAGRAGGVDVSHRGGKPGFVRVGADGTLTVPDFMGNFFFNTLGNIAV
NPRAGLLFIDFDNGDLLYLAVTADIIWDGPEVQAFAEAQRLLRFKVGSMRLVKGSLPLRWGEAELSPVLETTGTWA

Sequences:

>Translated_316_residues
MSVSAFHEGERAVQARVGVQERMAQLGPRVIRDFMPDQHREFFGQLPFVIAGTADASGQPWASVLAAPPGFIHSPHPQRL
VLQAQPLPGDPLQDTLAEGAAIGLLGMEPHTRRRNRMNGVVQGLGAAGFSVQVSQSFGNCPKYIQAREPVYDAGLAPVPP
VVHQAGQLDDAARAMIAAADTLFIATAYMGDGDDAGRAGGVDVSHRGGKPGFVRVGADGTLTVPDFMGNFFFNTLGNIAV
NPRAGLLFIDFDNGDLLYLAVTADIIWDGPEVQAFAEAQRLLRFKVGSMRLVKGSLPLRWGEAELSPVLETTGTWA
>Mature_315_residues
SVSAFHEGERAVQARVGVQERMAQLGPRVIRDFMPDQHREFFGQLPFVIAGTADASGQPWASVLAAPPGFIHSPHPQRLV
LQAQPLPGDPLQDTLAEGAAIGLLGMEPHTRRRNRMNGVVQGLGAAGFSVQVSQSFGNCPKYIQAREPVYDAGLAPVPPV
VHQAGQLDDAARAMIAAADTLFIATAYMGDGDDAGRAGGVDVSHRGGKPGFVRVGADGTLTVPDFMGNFFFNTLGNIAVN
PRAGLLFIDFDNGDLLYLAVTADIIWDGPEVQAFAEAQRLLRFKVGSMRLVKGSLPLRWGEAELSPVLETTGTWA

Specific function: Unknown

COG id: COG3576

COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33708; Mature: 33577

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSAFHEGERAVQARVGVQERMAQLGPRVIRDFMPDQHREFFGQLPFVIAGTADASGQP
CCCCCHHCHHHHHHHHHCHHHHHHHHCHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCCC
WASVLAAPPGFIHSPHPQRLVLQAQPLPGDPLQDTLAEGAAIGLLGMEPHTRRRNRMNGV
HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHH
VQGLGAAGFSVQVSQSFGNCPKYIQAREPVYDAGLAPVPPVVHQAGQLDDAARAMIAAAD
HHHCCCCCCEEEECCCCCCCHHHHHCCCCHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHH
TLFIATAYMGDGDDAGRAGGVDVSHRGGKPGFVRVGADGTLTVPDFMGNFFFNTLGNIAV
HEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHCCEEE
NPRAGLLFIDFDNGDLLYLAVTADIIWDGPEVQAFAEAQRLLRFKVGSMRLVKGSLPLRW
CCCCCEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEE
GEAELSPVLETTGTWA
CCHHHHHHHHCCCCCC
>Mature Secondary Structure 
SVSAFHEGERAVQARVGVQERMAQLGPRVIRDFMPDQHREFFGQLPFVIAGTADASGQP
CCCCHHCHHHHHHHHHCHHHHHHHHCHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCCC
WASVLAAPPGFIHSPHPQRLVLQAQPLPGDPLQDTLAEGAAIGLLGMEPHTRRRNRMNGV
HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHH
VQGLGAAGFSVQVSQSFGNCPKYIQAREPVYDAGLAPVPPVVHQAGQLDDAARAMIAAAD
HHHCCCCCCEEEECCCCCCCHHHHHCCCCHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHH
TLFIATAYMGDGDDAGRAGGVDVSHRGGKPGFVRVGADGTLTVPDFMGNFFFNTLGNIAV
HEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHCCEEE
NPRAGLLFIDFDNGDLLYLAVTADIIWDGPEVQAFAEAQRLLRFKVGSMRLVKGSLPLRW
CCCCCEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEE
GEAELSPVLETTGTWA
CCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA