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The map label for this gene is afaC [H]

Identifier: 91786516

GI number: 91786516

Start: 617471

End: 619867

Strand: Reverse

Name: afaC [H]

Synonym: Bpro_0610

Alternate gene names: 91786516

Gene position: 619867-617471 (Counterclockwise)

Preceding gene: 91786517

Following gene: 91786515

Centisome position: 11.92

GC content: 65.29

Gene sequence:

>2397_bases
ATGACAAGGGGGCGTTGCCGGCTTTTACATGTGCGCGCCTGCCTTGTCATGGCAAGTCTCTGCGCGGGCGCCGCAGCGCA
GGGCCAGACCACACCGCCGTCCAACGTTCCGGCCACTGCCCGGTCAGCCAATGACCGGCTGCTTCCGCTGGAAGTGTTCA
TCAACAACACCAAAGGCGGCGTCTGGACCCTGCTCGAGCGCAATGGCATTTTGTATGCGCCGTCAGACGCCTTCGACGAG
TGGCGCCTGAACCACCAGCCCAGCGCCCAGGACATCCAGTTTCAGGGCCAGCAGTGGTACCCGCTTTCGGCGATTCCGGG
ATTTGAAGCGCGACTCAACTTTGCCACCCAGTCGGTCGATCTGGTGTTTTCGCCGGCGGCCTTCAACGCCGTGCGCCTGA
CGCAGGAAGCCGCACTGCGCCCCCCGCTGTCGCCCACCATTCCCGCCGTCTTTGCCAACTACGACCTGAACTACACCACC
AGCCGCAGCCGCGTCACGGGCAGCGATGACTTGCGCACCAAGGACCTGGGCGCCTTGACGGAGCTCGGGTTTTCGGGGCA
ATGGGGCCTGGTGACCAGCAGCTACGTTGGCCGCAACCTGGTCAGCCAGGACCCCACGCTCAATGCCTCGTGGCGGCGGC
TGGAGACCACCTACACCCGGAACTTCCTGGACAGCAACAGCACGCTGCGGCTGGGCGACAGCATCACGCGCACGGGCATC
TCGGGCCGCTCCGTTTACTTTGGCGGCTTTCAGTTCGCCAAGAATTTTGCCCTGCAACCGGGCTTCGTGACGCAGCCCAT
CCCCACCGTCACCGGGCTGTCTGCCGCGCCCAGCACCGTGGAGCTGTATGTCAATGATGCGCTCCGGCAAACCTCCCGGG
TGCCCTCGGGGCCCTTCAGCATCGACAACTTCCCGGCACTGACGGGCGCGGGCGAAGCGCGGGTCGTGGTGCGCGACATC
CTGGGCCGCGAAACCGTGATCACCCAGTCCTTTTTCAGCAATGCCAATCTGCTGGAGGAGAACCTGACGGACTGGAGCTT
CGAGCTGGGCGCCGTCCGCAACAACCTGGGCACTGACAATGCCAACTATGGCCCGCGCTTCATCGCCGGCCTCTGGCGCA
AGGGGCTGAGCAAGAGCCTGACGGTGGAAGGCAACGGGGAGTGGTCCTCCTCGCTGAGCCGTGCGGGCGCGGGTGTGAGC
TACGCGCTGCCGTTCCAGATGCTGGGCCAAACCGCACTGGCGGTGAGCCGCAGCGACACGGTTGGCAATGGCCACAACTG
GCTGGTCGGCGTAGAGCGCAGCGGCCTGCGCCACGGCGTGGCCTTCAGCGCGCAAGGCGCATCGCGTGGCTACCGGCAGC
TCGGTATTGACACGGCATCGCCCCGCCTGCAAACCACCGCCAGCTACAGCTACAGCAGCGACAAGTTCGGGGCGTTGAAC
CTGAGCTATGCCGGCTTTGACAATTACGAGCTGGGCAAGCTCAATACCGTGAGCCTGAGCTACACCATCCGGCTGGGGCA
GCGCAGCGCCCTGACGTTGAGCGCCACCCGGCTCAGCGGCGTGTCTTCCGGCAATTCGCTCGGTGCGTTCCTGATCGTGC
CGCTGGACAACCGCATCACGATCGCCTCCGGTGCGACCCGCCGAAGCGGCAGCACCGACAGCTATGTGAACGCCAGCCGG
GCCCTCAGTGCCGAAACCGGCTGGGGCTGGCGAACCGCGCTGGGCTCGCGCGTCGACGGAGGCTACGCCGAGGGCGGCGC
TTATTACCAGGGAACCAAAGGACTGTTCTCAGCCGACGTCAGTGGTGCGAAAAACCAGCAGAACGTGCGCCTGGGCCTGC
TCGGCGGCGTCGTCATGGCCGATGGGCAAGTCTTCGCCACACGCCGCGTGCAAGACAGCTTTGCGATTGTCGAAGTACCG
GGCTATGCGAATGTGGGTGTGGGCTTTCAGGGCAGCACGCTGACCCGCACCAACAGCAGCGGCGTAGCGCTCCTGCCGCG
CCTGCTGCCGTTCCAGCGCAACAGCGTGCGCCTGGATCCGACCGAACTGCCGATCAGCGCCGAGCTGGACTCAATTGAAC
AGGAAGCCGTGCCGGCCCTGCGCAGCGCGGTCAAGATCACCTTCCCCGTGCGATCCGGCCGGGGCGCCTTGATCCGCATT
GAATTCGACGACGGCGAACCCGCGCCCGCCGGTGCAGAAATCGAACTGGTGGGCGACAAAAAGGAATTCTTTGTCGCCCG
GCGTGGGGAGGCTTTTGTTACCGGCCTGCAATCTGCCAACCGTTTGCGGCTGAAGTGGAACGGCAACAGCTGTACCTTCG
ACGTGGCCTTGCCGCCCGGCAATCTGGAGGACATCACCCGGGTGGGCCCCGTCCGCTGCATCGGCGTCAAACGGTGA

Upstream 100 bases:

>100_bases
GCGAGAAAGCCGTCACCGCAGGCCCGGCGCAGCTGGTCGTGACATTCGACGACGGACAGAGCCTGACGACCAGCATCACG
CTGCCCTGATCCAGCACCGT

Downstream 100 bases:

>100_bases
AGCGTCTCCGGATGGCCAGCTCCAGAAAACTGCGCAAAGGGGGCGCGCGCCGTGATAATCCGCGAACAGGGTCTGCAGTT
ACCCCGCGCATTGAGGCTTT

Product: fimbrial biogenesis outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 798; Mature: 797

Protein sequence:

>798_residues
MTRGRCRLLHVRACLVMASLCAGAAAQGQTTPPSNVPATARSANDRLLPLEVFINNTKGGVWTLLERNGILYAPSDAFDE
WRLNHQPSAQDIQFQGQQWYPLSAIPGFEARLNFATQSVDLVFSPAAFNAVRLTQEAALRPPLSPTIPAVFANYDLNYTT
SRSRVTGSDDLRTKDLGALTELGFSGQWGLVTSSYVGRNLVSQDPTLNASWRRLETTYTRNFLDSNSTLRLGDSITRTGI
SGRSVYFGGFQFAKNFALQPGFVTQPIPTVTGLSAAPSTVELYVNDALRQTSRVPSGPFSIDNFPALTGAGEARVVVRDI
LGRETVITQSFFSNANLLEENLTDWSFELGAVRNNLGTDNANYGPRFIAGLWRKGLSKSLTVEGNGEWSSSLSRAGAGVS
YALPFQMLGQTALAVSRSDTVGNGHNWLVGVERSGLRHGVAFSAQGASRGYRQLGIDTASPRLQTTASYSYSSDKFGALN
LSYAGFDNYELGKLNTVSLSYTIRLGQRSALTLSATRLSGVSSGNSLGAFLIVPLDNRITIASGATRRSGSTDSYVNASR
ALSAETGWGWRTALGSRVDGGYAEGGAYYQGTKGLFSADVSGAKNQQNVRLGLLGGVVMADGQVFATRRVQDSFAIVEVP
GYANVGVGFQGSTLTRTNSSGVALLPRLLPFQRNSVRLDPTELPISAELDSIEQEAVPALRSAVKITFPVRSGRGALIRI
EFDDGEPAPAGAEIELVGDKKEFFVARRGEAFVTGLQSANRLRLKWNGNSCTFDVALPPGNLEDITRVGPVRCIGVKR

Sequences:

>Translated_798_residues
MTRGRCRLLHVRACLVMASLCAGAAAQGQTTPPSNVPATARSANDRLLPLEVFINNTKGGVWTLLERNGILYAPSDAFDE
WRLNHQPSAQDIQFQGQQWYPLSAIPGFEARLNFATQSVDLVFSPAAFNAVRLTQEAALRPPLSPTIPAVFANYDLNYTT
SRSRVTGSDDLRTKDLGALTELGFSGQWGLVTSSYVGRNLVSQDPTLNASWRRLETTYTRNFLDSNSTLRLGDSITRTGI
SGRSVYFGGFQFAKNFALQPGFVTQPIPTVTGLSAAPSTVELYVNDALRQTSRVPSGPFSIDNFPALTGAGEARVVVRDI
LGRETVITQSFFSNANLLEENLTDWSFELGAVRNNLGTDNANYGPRFIAGLWRKGLSKSLTVEGNGEWSSSLSRAGAGVS
YALPFQMLGQTALAVSRSDTVGNGHNWLVGVERSGLRHGVAFSAQGASRGYRQLGIDTASPRLQTTASYSYSSDKFGALN
LSYAGFDNYELGKLNTVSLSYTIRLGQRSALTLSATRLSGVSSGNSLGAFLIVPLDNRITIASGATRRSGSTDSYVNASR
ALSAETGWGWRTALGSRVDGGYAEGGAYYQGTKGLFSADVSGAKNQQNVRLGLLGGVVMADGQVFATRRVQDSFAIVEVP
GYANVGVGFQGSTLTRTNSSGVALLPRLLPFQRNSVRLDPTELPISAELDSIEQEAVPALRSAVKITFPVRSGRGALIRI
EFDDGEPAPAGAEIELVGDKKEFFVARRGEAFVTGLQSANRLRLKWNGNSCTFDVALPPGNLEDITRVGPVRCIGVKR
>Mature_797_residues
TRGRCRLLHVRACLVMASLCAGAAAQGQTTPPSNVPATARSANDRLLPLEVFINNTKGGVWTLLERNGILYAPSDAFDEW
RLNHQPSAQDIQFQGQQWYPLSAIPGFEARLNFATQSVDLVFSPAAFNAVRLTQEAALRPPLSPTIPAVFANYDLNYTTS
RSRVTGSDDLRTKDLGALTELGFSGQWGLVTSSYVGRNLVSQDPTLNASWRRLETTYTRNFLDSNSTLRLGDSITRTGIS
GRSVYFGGFQFAKNFALQPGFVTQPIPTVTGLSAAPSTVELYVNDALRQTSRVPSGPFSIDNFPALTGAGEARVVVRDIL
GRETVITQSFFSNANLLEENLTDWSFELGAVRNNLGTDNANYGPRFIAGLWRKGLSKSLTVEGNGEWSSSLSRAGAGVSY
ALPFQMLGQTALAVSRSDTVGNGHNWLVGVERSGLRHGVAFSAQGASRGYRQLGIDTASPRLQTTASYSYSSDKFGALNL
SYAGFDNYELGKLNTVSLSYTIRLGQRSALTLSATRLSGVSSGNSLGAFLIVPLDNRITIASGATRRSGSTDSYVNASRA
LSAETGWGWRTALGSRVDGGYAEGGAYYQGTKGLFSADVSGAKNQQNVRLGLLGGVVMADGQVFATRRVQDSFAIVEVPG
YANVGVGFQGSTLTRTNSSGVALLPRLLPFQRNSVRLDPTELPISAELDSIEQEAVPALRSAVKITFPVRSGRGALIRIE
FDDGEPAPAGAEIELVGDKKEFFVARRGEAFVTGLQSANRLRLKWNGNSCTFDVALPPGNLEDITRVGPVRCIGVKR

Specific function: Involved in the export and assembly of AFA-III afimbrial adhesin subunits across the outer membrane [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1786332, Length=240, Percent_Identity=28.3333333333333, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1790772, Length=234, Percent_Identity=24.7863247863248, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1789533, Length=211, Percent_Identity=25.1184834123223, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 85664; Mature: 85533

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGRCRLLHVRACLVMASLCAGAAAQGQTTPPSNVPATARSANDRLLPLEVFINNTKGG
CCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC
VWTLLERNGILYAPSDAFDEWRLNHQPSAQDIQFQGQQWYPLSAIPGFEARLNFATQSVD
EEEEEECCCEEECCCCCHHHCCCCCCCCCCCEEECCCEEEECCCCCCCHHEEEEEEEEEE
LVFSPAAFNAVRLTQEAALRPPLSPTIPAVFANYDLNYTTSRSRVTGSDDLRTKDLGALT
EEECCCCCCEEEECHHHHCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCHHHHHHHH
ELGFSGQWGLVTSSYVGRNLVSQDPTLNASWRRLETTYTRNFLDSNSTLRLGDSITRTGI
HCCCCCCCCCEEHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHCCC
SGRSVYFGGFQFAKNFALQPGFVTQPIPTVTGLSAAPSTVELYVNDALRQTSRVPSGPFS
CCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCC
IDNFPALTGAGEARVVVRDILGRETVITQSFFSNANLLEENLTDWSFELGAVRNNLGTDN
CCCCCCCCCCCCCEEHHHHHCCCCCEEHHHHHCCCHHHHHCCCCCEEEHHHHHCCCCCCC
ANYGPRFIAGLWRKGLSKSLTVEGNGEWSSSLSRAGAGVSYALPFQMLGQTALAVSRSDT
CCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCEEECCHHHHCCHHEEEECCCC
VGNGHNWLVGVERSGLRHGVAFSAQGASRGYRQLGIDTASPRLQTTASYSYSSDKFGALN
CCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCEEE
LSYAGFDNYELGKLNTVSLSYTIRLGQRSALTLSATRLSGVSSGNSLGAFLIVPLDNRIT
EEECCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCEE
IASGATRRSGSTDSYVNASRALSAETGWGWRTALGSRVDGGYAEGGAYYQGTKGLFSADV
EECCCCCCCCCCCCCCCHHHEECCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCEEECCC
SGAKNQQNVRLGLLGGVVMADGQVFATRRVQDSFAIVEVPGYANVGVGFQGSTLTRTNSS
CCCCCCCCEEEEEECCEEEECCEEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEECCC
GVALLPRLLPFQRNSVRLDPTELPISAELDSIEQEAVPALRSAVKITFPVRSGRGALIRI
CCEEHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEEECCCCEEEEE
EFDDGEPAPAGAEIELVGDKKEFFVARRGEAFVTGLQSANRLRLKWNGNSCTFDVALPPG
EECCCCCCCCCCEEEEECCCCEEEEEECCCCEEEECCCCCEEEEEECCCEEEEEEEECCC
NLEDITRVGPVRCIGVKR
CHHHHHHCCCEEEEEECC
>Mature Secondary Structure 
TRGRCRLLHVRACLVMASLCAGAAAQGQTTPPSNVPATARSANDRLLPLEVFINNTKGG
CCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC
VWTLLERNGILYAPSDAFDEWRLNHQPSAQDIQFQGQQWYPLSAIPGFEARLNFATQSVD
EEEEEECCCEEECCCCCHHHCCCCCCCCCCCEEECCCEEEECCCCCCCHHEEEEEEEEEE
LVFSPAAFNAVRLTQEAALRPPLSPTIPAVFANYDLNYTTSRSRVTGSDDLRTKDLGALT
EEECCCCCCEEEECHHHHCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCHHHHHHHH
ELGFSGQWGLVTSSYVGRNLVSQDPTLNASWRRLETTYTRNFLDSNSTLRLGDSITRTGI
HCCCCCCCCCEEHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHCCC
SGRSVYFGGFQFAKNFALQPGFVTQPIPTVTGLSAAPSTVELYVNDALRQTSRVPSGPFS
CCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCC
IDNFPALTGAGEARVVVRDILGRETVITQSFFSNANLLEENLTDWSFELGAVRNNLGTDN
CCCCCCCCCCCCCEEHHHHHCCCCCEEHHHHHCCCHHHHHCCCCCEEEHHHHHCCCCCCC
ANYGPRFIAGLWRKGLSKSLTVEGNGEWSSSLSRAGAGVSYALPFQMLGQTALAVSRSDT
CCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCEEECCHHHHCCHHEEEECCCC
VGNGHNWLVGVERSGLRHGVAFSAQGASRGYRQLGIDTASPRLQTTASYSYSSDKFGALN
CCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCEEE
LSYAGFDNYELGKLNTVSLSYTIRLGQRSALTLSATRLSGVSSGNSLGAFLIVPLDNRIT
EEECCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCEE
IASGATRRSGSTDSYVNASRALSAETGWGWRTALGSRVDGGYAEGGAYYQGTKGLFSADV
EECCCCCCCCCCCCCCCHHHEECCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCEEECCC
SGAKNQQNVRLGLLGGVVMADGQVFATRRVQDSFAIVEVPGYANVGVGFQGSTLTRTNSS
CCCCCCCCEEEEEECCEEEECCEEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEECCC
GVALLPRLLPFQRNSVRLDPTELPISAELDSIEQEAVPALRSAVKITFPVRSGRGALIRI
CCEEHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEEECCCCEEEEE
EFDDGEPAPAGAEIELVGDKKEFFVARRGEAFVTGLQSANRLRLKWNGNSCTFDVALPPG
EECCCCCCCCCCEEEEECCCCEEEEEECCCCEEEECCCCCEEEEEECCCEEEEEEEECCC
NLEDITRVGPVRCIGVKR
CHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8002584 [H]