| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786511
Identifier: 91786511
GI number: 91786511
Start: 613052
End: 613810
Strand: Direct
Name: 91786511
Synonym: Bpro_0605
Alternate gene names: NA
Gene position: 613052-613810 (Clockwise)
Preceding gene: 91786501
Following gene: 91786512
Centisome position: 11.79
GC content: 63.5
Gene sequence:
>759_bases ATGTTTCGATATTTCTGGGTCGGAGTACTAGTGCGCACCATGTCCACCGACACCTCCCTGCATCAGCGCCGCAGAACGCC CACCGCGGATGAGCTGCAGGGCATTCCGTGGCTGCGTCTTCTGCAGCCGCCTGAGCGCGCGCGTGCTGTCGCACAGTTGC AGGTGGGCGATGCGGCCCCCGGCGACTATGTCTGCCGCATCGGCCGGCCCGTCACATACTGGTTCGGCGTGGTGGAGGGG CTGCTCAAAATGAGTACCGACAACGCGCAGGGAACGACCATCACCTTTGCCGGCTTGCCGCCCGGCGGCTGGTTTGGCGA GGGCACAGCGCTCAAGCGCGAGCCCTACCGCTACAACATCCAGGCCCTGCGCAAGAGCGTTGTGGCCGGTCTGCCCATCG ACTCGTTTCACTGGCTGCTGGACCATTCCATCGGGTTTAACCGCTTTGTGATGAACCAGCTGAACGAACGGCTGGGGCAG TTCATTGCCGCGCGTGAAATCGACCGCATGAACAACCCCGACCTGCGCGTGGCGCGCAGCCTGGCGGCACTGTTCAATCC GGTGCTGTATCCCGGCGTGGGCGATATCCTGCGCATCACGCAGCAGGAGATGGCCTACCTGGTCGGACTGTCGCGCCAGC GCGTCAACGAAGCGCTGAGCGCACTACAGGCGCAGGGCTTCATTCGCGTTGAATACGGCGGCTTGCGCGTGCTGGATCTT GCGGCCCTGCGCTCCAGCATCGCTTCAGACAAGAAGTAA
Upstream 100 bases:
>100_bases AAGCGATGGATTCGAGCCCAAGCCCAGGCGCAAACCGCAGACATAGCTGTAGCTATGGCGAGGATTTGCAACGACGGCAT GGGTTCGAAGGCGCGCTTTC
Downstream 100 bases:
>100_bases ATGCCGCCCTTCATGCAAGAGCCAGGCAAGCTATAAAATAAATAGCAAATGCAAGATCCATCCAAACCCGGAGCGGGGCC CAAACCAGGTGGCACGGCCG
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein; Transcription Regulator Protein; CRP/FNR Family Transcriptional Regulator; Cyclic-Nucleotide-Gated Cation Channel; CNMP Regulatory Protein; HTH Crp Family Transcriptional Regulator
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MFRYFWVGVLVRTMSTDTSLHQRRRTPTADELQGIPWLRLLQPPERARAVAQLQVGDAAPGDYVCRIGRPVTYWFGVVEG LLKMSTDNAQGTTITFAGLPPGGWFGEGTALKREPYRYNIQALRKSVVAGLPIDSFHWLLDHSIGFNRFVMNQLNERLGQ FIAAREIDRMNNPDLRVARSLAALFNPVLYPGVGDILRITQQEMAYLVGLSRQRVNEALSALQAQGFIRVEYGGLRVLDL AALRSSIASDKK
Sequences:
>Translated_252_residues MFRYFWVGVLVRTMSTDTSLHQRRRTPTADELQGIPWLRLLQPPERARAVAQLQVGDAAPGDYVCRIGRPVTYWFGVVEG LLKMSTDNAQGTTITFAGLPPGGWFGEGTALKREPYRYNIQALRKSVVAGLPIDSFHWLLDHSIGFNRFVMNQLNERLGQ FIAAREIDRMNNPDLRVARSLAALFNPVLYPGVGDILRITQQEMAYLVGLSRQRVNEALSALQAQGFIRVEYGGLRVLDL AALRSSIASDKK >Mature_252_residues MFRYFWVGVLVRTMSTDTSLHQRRRTPTADELQGIPWLRLLQPPERARAVAQLQVGDAAPGDYVCRIGRPVTYWFGVVEG LLKMSTDNAQGTTITFAGLPPGGWFGEGTALKREPYRYNIQALRKSVVAGLPIDSFHWLLDHSIGFNRFVMNQLNERLGQ FIAAREIDRMNNPDLRVARSLAALFNPVLYPGVGDILRITQQEMAYLVGLSRQRVNEALSALQAQGFIRVEYGGLRVLDL AALRSSIASDKK
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28261; Mature: 28261
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRYFWVGVLVRTMSTDTSLHQRRRTPTADELQGIPWLRLLQPPERARAVAQLQVGDAAP CCHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHCCCCHHHHCCCHHHHHHHHHHCCCCCCC GDYVCRIGRPVTYWFGVVEGLLKMSTDNAQGTTITFAGLPPGGWFGEGTALKREPYRYNI CHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECH QALRKSVVAGLPIDSFHWLLDHSIGFNRFVMNQLNERLGQFIAAREIDRMNNPDLRVARS HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LAALFNPVLYPGVGDILRITQQEMAYLVGLSRQRVNEALSALQAQGFIRVEYGGLRVLDL HHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHH AALRSSIASDKK HHHHHHHHCCCC >Mature Secondary Structure MFRYFWVGVLVRTMSTDTSLHQRRRTPTADELQGIPWLRLLQPPERARAVAQLQVGDAAP CCHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHCCCCHHHHCCCHHHHHHHHHHCCCCCCC GDYVCRIGRPVTYWFGVVEGLLKMSTDNAQGTTITFAGLPPGGWFGEGTALKREPYRYNI CHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECH QALRKSVVAGLPIDSFHWLLDHSIGFNRFVMNQLNERLGQFIAAREIDRMNNPDLRVARS HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LAALFNPVLYPGVGDILRITQQEMAYLVGLSRQRVNEALSALQAQGFIRVEYGGLRVLDL HHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHH AALRSSIASDKK HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA