| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786466
Identifier: 91786466
GI number: 91786466
Start: 559565
End: 560542
Strand: Direct
Name: 91786466
Synonym: Bpro_0560
Alternate gene names: NA
Gene position: 559565-560542 (Clockwise)
Preceding gene: 91786465
Following gene: 91786470
Centisome position: 10.76
GC content: 66.87
Gene sequence:
>978_bases ATGCAAAGACGTCATTTCATCCAGGCAACCGGCGCAGGCGCCGCAGTGCTGGCCCTGCCTGCGCTGCGCGCGCAAAGCTG GCCCTCGGGGCCCATCCGCATCGTCGTTGGTTTTCCGCCCGGCGGCGGGGCCGATGCGCTGGCCCGCGTGGTGGGCCTGA AACTCAGCGCCCTGTGGAACCAGCCCGTCGTCATCGAAAACAAGGCCGGTGCGTCCGGTACCCTGGCTGCCGAATACGTG GCCCAGCAGGCGAGCGACGGCACCACCTTGCTGCTGACCACCATCAACAGCCATGCCCTGGCGCCCGCCGTGCTGCCAAA GCTGCGCTACCACCCGGAGCGCGACTTCGTGCCGGTGGCGCTGCTGGGCCTGACGCCCAACCTGCTGATCGCCGGGGCCG TCCAGCCGGCCAGGACCGTGAAGGACCTGGTGGCCTTGTGCAAAGCCAAACCGGGCGTGGTCACCTTTGGCTCGGCCGGG CCTGGCACCGCCCAGCACTTCGCGCTGGAGCTGTTCAAGCTGCGCGCCAGGGTCGATGCGCTCCACGTGCCCTACAAAGG CAGCGGGCCGCTGTTGACCGACCTGGTCGGCGGGCAGATCCAGTACAGCTTTGAAACGATGACGGCCGCGACGCCCCACG TCAAGAGCGGGCGCGCCATCGCGGTGGCACAAACCCGCAGCAAGCGCGTGAAGGCCTATCCCGATGTGCCCACCATGCAG GAGCAGGGCTTTGCCGGCTTTGAAACCTTCAACTGGTACGGCATTTCCGGCTCAGGCAAGCTGCCGGCGCCCATCGCGTC GCGCATGAACAAGGACATCAACACCGTGCTGGCCATGGCCGACGTGCGGGAGAAGTTCGATGCTTTCGGTGTGGAGGACG GCGGCGGGTCACCGGAGAAATTTGCCGAGCTGGTGCGAAGTGAAATCGCCAAATGGGCCAAGGTGGCCCAGGAGGCCAAC GTACGGGTCGACGGCTGA
Upstream 100 bases:
>100_bases CTCGGCGCCAGCTACGAGGCGGCGCATCCATGGAGCGGGCGCTGGCCTGCCCTTTAAGACAGTTAGTTAACAATTTCAAT ACATCCAAAGAGACAACACC
Downstream 100 bases:
>100_bases CCTGCCCGCCGCTGTGCCGCAGGGCCGGGCGGCGGCGTTGAAACCCTGTTCTCGGTACTGGAAGTATTAGAGCTGAACCG ACGCCTCACCCACGCCGTCG
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MQRRHFIQATGAGAAVLALPALRAQSWPSGPIRIVVGFPPGGGADALARVVGLKLSALWNQPVVIENKAGASGTLAAEYV AQQASDGTTLLLTTINSHALAPAVLPKLRYHPERDFVPVALLGLTPNLLIAGAVQPARTVKDLVALCKAKPGVVTFGSAG PGTAQHFALELFKLRARVDALHVPYKGSGPLLTDLVGGQIQYSFETMTAATPHVKSGRAIAVAQTRSKRVKAYPDVPTMQ EQGFAGFETFNWYGISGSGKLPAPIASRMNKDINTVLAMADVREKFDAFGVEDGGGSPEKFAELVRSEIAKWAKVAQEAN VRVDG
Sequences:
>Translated_325_residues MQRRHFIQATGAGAAVLALPALRAQSWPSGPIRIVVGFPPGGGADALARVVGLKLSALWNQPVVIENKAGASGTLAAEYV AQQASDGTTLLLTTINSHALAPAVLPKLRYHPERDFVPVALLGLTPNLLIAGAVQPARTVKDLVALCKAKPGVVTFGSAG PGTAQHFALELFKLRARVDALHVPYKGSGPLLTDLVGGQIQYSFETMTAATPHVKSGRAIAVAQTRSKRVKAYPDVPTMQ EQGFAGFETFNWYGISGSGKLPAPIASRMNKDINTVLAMADVREKFDAFGVEDGGGSPEKFAELVRSEIAKWAKVAQEAN VRVDG >Mature_325_residues MQRRHFIQATGAGAAVLALPALRAQSWPSGPIRIVVGFPPGGGADALARVVGLKLSALWNQPVVIENKAGASGTLAAEYV AQQASDGTTLLLTTINSHALAPAVLPKLRYHPERDFVPVALLGLTPNLLIAGAVQPARTVKDLVALCKAKPGVVTFGSAG PGTAQHFALELFKLRARVDALHVPYKGSGPLLTDLVGGQIQYSFETMTAATPHVKSGRAIAVAQTRSKRVKAYPDVPTMQ EQGFAGFETFNWYGISGSGKLPAPIASRMNKDINTVLAMADVREKFDAFGVEDGGGSPEKFAELVRSEIAKWAKVAQEAN VRVDG
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34265; Mature: 34265
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRHFIQATGAGAAVLALPALRAQSWPSGPIRIVVGFPPGGGADALARVVGLKLSALWN CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC QPVVIENKAGASGTLAAEYVAQQASDGTTLLLTTINSHALAPAVLPKLRYHPERDFVPVA CCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEE LLGLTPNLLIAGAVQPARTVKDLVALCKAKPGVVTFGSAGPGTAQHFALELFKLRARVDA EECCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHE LHVPYKGSGPLLTDLVGGQIQYSFETMTAATPHVKSGRAIAVAQTRSKRVKAYPDVPTMQ EECCCCCCCCCHHHHCCCEEEEEEEEHCCCCCCCCCCCEEEEEECCCCCEEECCCCCCHH EQGFAGFETFNWYGISGSGKLPAPIASRMNKDINTVLAMADVREKFDAFGVEDGGGSPEK HCCCCCCEEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH FAELVRSEIAKWAKVAQEANVRVDG HHHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure MQRRHFIQATGAGAAVLALPALRAQSWPSGPIRIVVGFPPGGGADALARVVGLKLSALWN CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC QPVVIENKAGASGTLAAEYVAQQASDGTTLLLTTINSHALAPAVLPKLRYHPERDFVPVA CCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEE LLGLTPNLLIAGAVQPARTVKDLVALCKAKPGVVTFGSAGPGTAQHFALELFKLRARVDA EECCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHE LHVPYKGSGPLLTDLVGGQIQYSFETMTAATPHVKSGRAIAVAQTRSKRVKAYPDVPTMQ EECCCCCCCCCHHHHCCCEEEEEEEEHCCCCCCCCCCCEEEEEECCCCCEEECCCCCCHH EQGFAGFETFNWYGISGSGKLPAPIASRMNKDINTVLAMADVREKFDAFGVEDGGGSPEK HCCCCCCEEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH FAELVRSEIAKWAKVAQEANVRVDG HHHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]