Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is resE [H]

Identifier: 91786450

GI number: 91786450

Start: 541905

End: 543368

Strand: Direct

Name: resE [H]

Synonym: Bpro_0544

Alternate gene names: 91786450

Gene position: 541905-543368 (Clockwise)

Preceding gene: 91786449

Following gene: 91786452

Centisome position: 10.42

GC content: 63.59

Gene sequence:

>1464_bases
ATGAGCTTCAGAGGCACCCTCTCGCAACGTCTATCCGTAGTGTTTTCGGTCCTGCTGCTGGCTTGCTGCAGTGCATCGGC
GTGGCTACAGATAAAGGCAAATGGGCGCCATGATCAGGAAGTGACCCAGCGCCTCTCCAACGGCCTTGCAGCACACATCG
CAGACAACGCTGCGCTCGTGGAACGCGACGGACTCAACCCGGAGGCCGTGCACGATCTGTTCGACAAACTGATGGCGGTC
AATCCTAGCGTTGAGGTCTACTTGTTGGATCTGGACGGTCGCATTCAGGCTCAGGCCGCACCGCCTGGGCACTTGAAGCG
TGACCGGGTCGACGTCGCGCCCATCCGACGCCTTCTCGAAGGCACACCCTTGCCGATCGTCGGCGACGATCCGCGAGGTG
ATGGCGTGCAGAAAGTGTTCAGTGCGGCACCCTTGCGCGTCGATGACCGCGATGTCGGCTATGTCTACGTCGTGTTGTTC
GGCGAGGACCGTGATGCGGTGGCTGCCAACGTCGCGGCGAACAGTGTACTCAGGACCACCCTGTGGTCGATGGCTCTCGT
GGCGCTGCTAGGCCTGCTGGCCGGACTGGCGGCCTTTCACCTGATCACCCGGCCGCTGCGCGATCTCACCGGTGCGGTGC
GCAAATTCGAGAAAGACGGCGTGGTGTCGCTGCACGAGGCGGGGCCGGCCCTCGAACGGGCGGGCCGGGGCAGCGACGAA
ATCGCCACACTGGGACAGGCCTTTGCGCAGATGACACAGCGCATCGCGGCGCAGTGGCGCGAACTCACGGCGCAGGACCA
GCAGCGGCGCGAACTGTTTGCCAACATTTCGCACGACCTGCGCACACCGCTCACCTCTCTGCACGGTTACCTCGAAACGC
TGCTCATCAAGGCCGACGCCCTGGACCCCGGCGAACGCCGCCGCTACCTCGAGATCGCGTTGGCGCAAAGCCGTAAGGTC
GCGCGGCTGGCGCAGGAATTGTTCGAGCTGGCGCGTCTGGAGTACGGCGTCGTCAAGCCCGACAAGGAGACTTTCGCCCT
GGCCGACCTGGTGCAGGACGTGTTCCAGAAGTTCGAATTGGCGGCAGAGGCGCGGCACCAACGTCTGGTGCCGGACATTG
CACCAGGCCTTCCCGTCGTTACAGCCGATCTCGGCATGATCGAGCGCGTGCTGACCAACCTGCTGGACAACGCGATCCGC
CACACGCCCGAGGGCGGCGAGATCGTGGTGCAGCTACGACAAGACCGGGAGTCCGTGTGCGTCGAGGTCAGCGACACCGG
ACCGGGCATTCCCGGCGAGTTACAGAAGTCGCTCTTCACCCGACCCGCGTTTTCGTCGGCCGGCGGCCGCAGCGGCGGAC
TCGGACTGGTCATTGTGCAACGCATACTTCAGTTGCATGGCAGCGACATTCGGCTGCTGCAGCGTGCCGAGAAAGGTGCC
GTATTTTTCTTTCAACTCACATGA

Upstream 100 bases:

>100_bases
GCATGAAGGTCGAGGCGGATCCAACGGAGCCGCGGCGTATCCTCACGGTGTGGGGGCGCGGCTACAAGTTGGCGATATCG
GCCATGGAGGAGAGCGGCGA

Downstream 100 bases:

>100_bases
GAGTCACCGCTCGCGCAAGACTCCTTGTCCGTCTAGTGCACCGCCCGCCTCGATGCCCACGTGCCTCTTTTTGCACCATG
GCACCGAAATTGAACCCCCC

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MSFRGTLSQRLSVVFSVLLLACCSASAWLQIKANGRHDQEVTQRLSNGLAAHIADNAALVERDGLNPEAVHDLFDKLMAV
NPSVEVYLLDLDGRIQAQAAPPGHLKRDRVDVAPIRRLLEGTPLPIVGDDPRGDGVQKVFSAAPLRVDDRDVGYVYVVLF
GEDRDAVAANVAANSVLRTTLWSMALVALLGLLAGLAAFHLITRPLRDLTGAVRKFEKDGVVSLHEAGPALERAGRGSDE
IATLGQAFAQMTQRIAAQWRELTAQDQQRRELFANISHDLRTPLTSLHGYLETLLIKADALDPGERRRYLEIALAQSRKV
ARLAQELFELARLEYGVVKPDKETFALADLVQDVFQKFELAAEARHQRLVPDIAPGLPVVTADLGMIERVLTNLLDNAIR
HTPEGGEIVVQLRQDRESVCVEVSDTGPGIPGELQKSLFTRPAFSSAGGRSGGLGLVIVQRILQLHGSDIRLLQRAEKGA
VFFFQLT

Sequences:

>Translated_487_residues
MSFRGTLSQRLSVVFSVLLLACCSASAWLQIKANGRHDQEVTQRLSNGLAAHIADNAALVERDGLNPEAVHDLFDKLMAV
NPSVEVYLLDLDGRIQAQAAPPGHLKRDRVDVAPIRRLLEGTPLPIVGDDPRGDGVQKVFSAAPLRVDDRDVGYVYVVLF
GEDRDAVAANVAANSVLRTTLWSMALVALLGLLAGLAAFHLITRPLRDLTGAVRKFEKDGVVSLHEAGPALERAGRGSDE
IATLGQAFAQMTQRIAAQWRELTAQDQQRRELFANISHDLRTPLTSLHGYLETLLIKADALDPGERRRYLEIALAQSRKV
ARLAQELFELARLEYGVVKPDKETFALADLVQDVFQKFELAAEARHQRLVPDIAPGLPVVTADLGMIERVLTNLLDNAIR
HTPEGGEIVVQLRQDRESVCVEVSDTGPGIPGELQKSLFTRPAFSSAGGRSGGLGLVIVQRILQLHGSDIRLLQRAEKGA
VFFFQLT
>Mature_486_residues
SFRGTLSQRLSVVFSVLLLACCSASAWLQIKANGRHDQEVTQRLSNGLAAHIADNAALVERDGLNPEAVHDLFDKLMAVN
PSVEVYLLDLDGRIQAQAAPPGHLKRDRVDVAPIRRLLEGTPLPIVGDDPRGDGVQKVFSAAPLRVDDRDVGYVYVVLFG
EDRDAVAANVAANSVLRTTLWSMALVALLGLLAGLAAFHLITRPLRDLTGAVRKFEKDGVVSLHEAGPALERAGRGSDEI
ATLGQAFAQMTQRIAAQWRELTAQDQQRRELFANISHDLRTPLTSLHGYLETLLIKADALDPGERRRYLEIALAQSRKVA
RLAQELFELARLEYGVVKPDKETFALADLVQDVFQKFELAAEARHQRLVPDIAPGLPVVTADLGMIERVLTNLLDNAIRH
TPEGGEIVVQLRQDRESVCVEVSDTGPGIPGELQKSLFTRPAFSSAGGRSGGLGLVIVQRILQLHGSDIRLLQRAEKGAV
FFFQLT

Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1786912, Length=229, Percent_Identity=31.4410480349345, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1790861, Length=357, Percent_Identity=28.0112044817927, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1786600, Length=221, Percent_Identity=31.2217194570136, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788549, Length=213, Percent_Identity=29.1079812206573, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1789149, Length=284, Percent_Identity=28.5211267605634, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1786783, Length=321, Percent_Identity=27.4143302180685, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1788713, Length=221, Percent_Identity=26.2443438914027, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI87081816, Length=340, Percent_Identity=28.8235294117647, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=28.2700421940928, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1790551, Length=299, Percent_Identity=28.7625418060201, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1788393, Length=240, Percent_Identity=27.9166666666667, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI145693157, Length=226, Percent_Identity=27.8761061946903, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI48994928, Length=220, Percent_Identity=26.3636363636364, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI87082128, Length=316, Percent_Identity=23.4177215189873, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1790346, Length=270, Percent_Identity=28.8888888888889, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790300, Length=238, Percent_Identity=28.1512605042017, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1789403, Length=332, Percent_Identity=28.6144578313253, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788279, Length=231, Percent_Identity=25.1082251082251, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 53239; Mature: 53108

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRGTLSQRLSVVFSVLLLACCSASAWLQIKANGRHDQEVTQRLSNGLAAHIADNAALV
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEECCCCCCEE
ERDGLNPEAVHDLFDKLMAVNPSVEVYLLDLDGRIQAQAAPPGHLKRDRVDVAPIRRLLE
ECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHC
GTPLPIVGDDPRGDGVQKVFSAAPLRVDDRDVGYVYVVLFGEDRDAVAANVAANSVLRTT
CCCCCEECCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
LWSMALVALLGLLAGLAAFHLITRPLRDLTGAVRKFEKDGVVSLHEAGPALERAGRGSDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCHHHHHCCCCCHH
IATLGQAFAQMTQRIAAQWRELTAQDQQRRELFANISHDLRTPLTSLHGYLETLLIKADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LDPGERRRYLEIALAQSRKVARLAQELFELARLEYGVVKPDKETFALADLVQDVFQKFEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
AAEARHQRLVPDIAPGLPVVTADLGMIERVLTNLLDNAIRHTPEGGEIVVQLRQDRESVC
HHHHHHHHCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCCEE
VEVSDTGPGIPGELQKSLFTRPAFSSAGGRSGGLGLVIVQRILQLHGSDIRLLQRAEKGA
EEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCC
VFFFQLT
EEEEEEC
>Mature Secondary Structure 
SFRGTLSQRLSVVFSVLLLACCSASAWLQIKANGRHDQEVTQRLSNGLAAHIADNAALV
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEECCCCCCEE
ERDGLNPEAVHDLFDKLMAVNPSVEVYLLDLDGRIQAQAAPPGHLKRDRVDVAPIRRLLE
ECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHC
GTPLPIVGDDPRGDGVQKVFSAAPLRVDDRDVGYVYVVLFGEDRDAVAANVAANSVLRTT
CCCCCEECCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
LWSMALVALLGLLAGLAAFHLITRPLRDLTGAVRKFEKDGVVSLHEAGPALERAGRGSDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCHHHHHCCCCCHH
IATLGQAFAQMTQRIAAQWRELTAQDQQRRELFANISHDLRTPLTSLHGYLETLLIKADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LDPGERRRYLEIALAQSRKVARLAQELFELARLEYGVVKPDKETFALADLVQDVFQKFEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
AAEARHQRLVPDIAPGLPVVTADLGMIERVLTNLLDNAIRHTPEGGEIVVQLRQDRESVC
HHHHHHHHCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCCEE
VEVSDTGPGIPGELQKSLFTRPAFSSAGGRSGGLGLVIVQRILQLHGSDIRLLQRAEKGA
EEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCC
VFFFQLT
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 8631715 [H]