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The map label for this gene is pecT [H]

Identifier: 91786420

GI number: 91786420

Start: 518352

End: 519215

Strand: Direct

Name: pecT [H]

Synonym: Bpro_0510

Alternate gene names: 91786420

Gene position: 518352-519215 (Clockwise)

Preceding gene: 91786418

Following gene: 91786421

Centisome position: 9.97

GC content: 67.01

Gene sequence:

>864_bases
ATGAAAATGATGGAGCGCCCCCTCGACCTAGATGCCATCGAGGCTTTCATCCGCATCGCCGAGCTTGACAGCTTCACGCG
CGCGGCTGAAGCCATGCGGACGACGCAGGCCGCGGTCAGCTTGAAGCTGAAGCGGCTCGAAGAGAGGCTCGGCTGCCGGC
TCGTCGAGCGGACGCCCCGGCACGTGCAGCTTTCGGCGCAGGGCGCAGCCTTCCTTGAACACGCCCGCGAGCTCCTGGAG
GTACACGATCGCGCGCTCGCCGTATTTGCCGGAGCCCGGCAGCGCCTCACCATCGGCATCAGCGACCATGTTGCGGGGCC
GGAGCTCCCCGCGCTGATCGCGCGCATGAACGCGCAAGACCCGCAGCTGTTGATCGAAATCCGGATCGGATCGTCGGGCG
ACCTGCTTCAAAGCTTCGACCGGCGGGAACTCGACACGGTGATCGTCCGCCTGCATGTCGGGCGCAGCGACGGGGAAATT
CTGACCGAAGAAAAATTCGGCTGGTTCGCAGCGCCAAGCTGGCAGCATCGCGCGGGCGAGCCCCTGCCGCTTGCCACGCT
GGCCGAGCCCTGCGGCGTGCGTGCGATGGCCGGGCAGTTTCTCGATGCGGCAGCCGTGCCCTGGATAGAAATTTTCGTCG
GCGGCGGCGTTGCGGCAGTCGCGGCGGCCGTCATGGCCGGGCTGGGCGTTGCTGCATTGGCTCCGCGCATGCTGCCATTT
GGCGCAGTTGACGTGGGCCCCAAGCTCGGGCTTCCCGATTTACCGCGCTTGCCGGTTCTGCTTCACTCAAGGGTCAAGGA
CGGCCGGTCGCGCGATGCGCTTGCCGCGCTTTCGGCTGCCTTCAGGAGCGCGGTGCGCGGCTAG

Upstream 100 bases:

>100_bases
GTGAGATATGAAGCAGTGGCATCGGGAGTCCTTTCCATGTTGTGCTGGCTTCATGTTATCTATTTTGATATGCTATTGAT
ACTTATATCAGTGATAATGA

Downstream 100 bases:

>100_bases
CCAACGCTCCCAGCGCGACTGCTTTCGGCGCGTCGAGGGCCCAGAGCGGCGACTTGAGACTTCGACGCGCCGGTCCGTCC
CGGATCGTCGCTGGCGCAGG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Pectinase gene transcriptional regulator [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKMMERPLDLDAIEAFIRIAELDSFTRAAEAMRTTQAAVSLKLKRLEERLGCRLVERTPRHVQLSAQGAAFLEHARELLE
VHDRALAVFAGARQRLTIGISDHVAGPELPALIARMNAQDPQLLIEIRIGSSGDLLQSFDRRELDTVIVRLHVGRSDGEI
LTEEKFGWFAAPSWQHRAGEPLPLATLAEPCGVRAMAGQFLDAAAVPWIEIFVGGGVAAVAAAVMAGLGVAALAPRMLPF
GAVDVGPKLGLPDLPRLPVLLHSRVKDGRSRDALAALSAAFRSAVRG

Sequences:

>Translated_287_residues
MKMMERPLDLDAIEAFIRIAELDSFTRAAEAMRTTQAAVSLKLKRLEERLGCRLVERTPRHVQLSAQGAAFLEHARELLE
VHDRALAVFAGARQRLTIGISDHVAGPELPALIARMNAQDPQLLIEIRIGSSGDLLQSFDRRELDTVIVRLHVGRSDGEI
LTEEKFGWFAAPSWQHRAGEPLPLATLAEPCGVRAMAGQFLDAAAVPWIEIFVGGGVAAVAAAVMAGLGVAALAPRMLPF
GAVDVGPKLGLPDLPRLPVLLHSRVKDGRSRDALAALSAAFRSAVRG
>Mature_287_residues
MKMMERPLDLDAIEAFIRIAELDSFTRAAEAMRTTQAAVSLKLKRLEERLGCRLVERTPRHVQLSAQGAAFLEHARELLE
VHDRALAVFAGARQRLTIGISDHVAGPELPALIARMNAQDPQLLIEIRIGSSGDLLQSFDRRELDTVIVRLHVGRSDGEI
LTEEKFGWFAAPSWQHRAGEPLPLATLAEPCGVRAMAGQFLDAAAVPWIEIFVGGGVAAVAAAVMAGLGVAALAPRMLPF
GAVDVGPKLGLPDLPRLPVLLHSRVKDGRSRDALAALSAAFRSAVRG

Specific function: Regulates pectinase gene expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788626, Length=275, Percent_Identity=32.7272727272727, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI145693105, Length=251, Percent_Identity=28.6852589641434, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787601, Length=176, Percent_Identity=28.4090909090909, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787806, Length=144, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788481, Length=242, Percent_Identity=27.6859504132231, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 30930; Mature: 30930

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMMERPLDLDAIEAFIRIAELDSFTRAAEAMRTTQAAVSLKLKRLEERLGCRLVERTPR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
HVQLSAQGAAFLEHARELLEVHDRALAVFAGARQRLTIGISDHVAGPELPALIARMNAQD
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCC
PQLLIEIRIGSSGDLLQSFDRRELDTVIVRLHVGRSDGEILTEEKFGWFAAPSWQHRAGE
CEEEEEEEECCCCHHHHHHHHHHHHEEEEEEEECCCCCCEEECCCCCEECCCCCCCCCCC
PLPLATLAEPCGVRAMAGQFLDAAAVPWIEIFVGGGVAAVAAAVMAGLGVAALAPRMLPF
CCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHCCC
GAVDVGPKLGLPDLPRLPVLLHSRVKDGRSRDALAALSAAFRSAVRG
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKMMERPLDLDAIEAFIRIAELDSFTRAAEAMRTTQAAVSLKLKRLEERLGCRLVERTPR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
HVQLSAQGAAFLEHARELLEVHDRALAVFAGARQRLTIGISDHVAGPELPALIARMNAQD
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCC
PQLLIEIRIGSSGDLLQSFDRRELDTVIVRLHVGRSDGEILTEEKFGWFAAPSWQHRAGE
CEEEEEEEECCCCHHHHHHHHHHHHEEEEEEEECCCCCCEEECCCCCEECCCCCCCCCCC
PLPLATLAEPCGVRAMAGQFLDAAAVPWIEIFVGGGVAAVAAAVMAGLGVAALAPRMLPF
CCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHCCC
GAVDVGPKLGLPDLPRLPVLLHSRVKDGRSRDALAALSAAFRSAVRG
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8626286 [H]